RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 INSRP06213 1382 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 BTAF1O14981 1849 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 PLSCR1O15162 318 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-222ENST00000473373 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-222ENST00000473373 ANO8Q9HCE9 1232 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-222ENST00000473373 NSD2O96028 1365 aa15.75■□□□□ 0.11
CPNE1-222ENST00000473373 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
CPNE1-222ENST00000473373 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
CPNE1-222ENST00000473373 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-222ENST00000473373 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-222ENST00000473373 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-222ENST00000473373 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CPNE1-222ENST00000473373 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
CPNE1-222ENST00000473373 SHANK3Q9BYB0 1731 aa15.72■□□□□ 0.11
CPNE1-222ENST00000473373 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
CPNE1-222ENST00000473373 NBPF6Q5VWK0 638 aa15.72■□□□□ 0.11
CPNE1-222ENST00000473373 NBPF4Q96M43 638 aa15.72■□□□□ 0.11
CPNE1-222ENST00000473373 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-222ENST00000473373 MEGF6O75095 1541 aa15.71■□□□□ 0.11
CPNE1-222ENST00000473373 BCL9O00512 1426 aa15.69■□□□□ 0.1
CPNE1-222ENST00000473373 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
CPNE1-222ENST00000473373 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
CPNE1-222ENST00000473373 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
CPNE1-222ENST00000473373 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
CPNE1-222ENST00000473373 PTGER2P43116 358 aa15.67■□□□□ 0.1
CPNE1-222ENST00000473373 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
CPNE1-222ENST00000473373 CC2D1BQ5T0F9 858 aaKnown RBP15.67■□□□□ 0.1
CPNE1-222ENST00000473373 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
CPNE1-222ENST00000473373 PKD1L3Q7Z443 1732 aa15.66■□□□□ 0.1
CPNE1-222ENST00000473373 ITGB4P16144 1822 aa15.66■□□□□ 0.1
CPNE1-222ENST00000473373 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
CPNE1-222ENST00000473373 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
CPNE1-222ENST00000473373 CASZ1Q86V15 1759 aa15.64■□□□□ 0.1
CPNE1-222ENST00000473373 PRIM1P49642 420 aaKnown RBP15.64■□□□□ 0.09
CPNE1-222ENST00000473373 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
CPNE1-222ENST00000473373 EYA1Q99502 592 aa15.64■□□□□ 0.09
CPNE1-222ENST00000473373 MSH5O43196 834 aa15.63■□□□□ 0.09
CPNE1-222ENST00000473373 SYT17Q9BSW7 474 aa15.63■□□□□ 0.09
CPNE1-222ENST00000473373 FHDC1Q9C0D6 1143 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-222ENST00000473373 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-222ENST00000473373 LY75O60449 1722 aa15.6■□□□□ 0.09
CPNE1-222ENST00000473373 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
CPNE1-222ENST00000473373 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
CPNE1-222ENST00000473373 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
CPNE1-222ENST00000473373 VIRMAQ69YN4 1812 aaKnown RBP15.59■□□□□ 0.09
CPNE1-222ENST00000473373 TOGARAM1Q9Y4F4 1720 aa15.58■□□□□ 0.08
CPNE1-222ENST00000473373 MTHFSP49914 203 aa15.57■□□□□ 0.08
CPNE1-222ENST00000473373 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
CPNE1-222ENST00000473373 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
CPNE1-222ENST00000473373 CYP27B1O15528 508 aa15.56■□□□□ 0.08
CPNE1-222ENST00000473373 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
CPNE1-222ENST00000473373 SLC27A3Q5K4L6 730 aa15.56■□□□□ 0.08
CPNE1-222ENST00000473373 ARXQ96QS3 562 aa15.56■□□□□ 0.08
CPNE1-222ENST00000473373 IGSF1Q8N6C5 1336 aa15.56■□□□□ 0.08
CPNE1-222ENST00000473373 NCAPD2Q15021 1401 aa15.56■□□□□ 0.08
CPNE1-222ENST00000473373 C5P01031 1676 aa15.55■□□□□ 0.08
CPNE1-222ENST00000473373 C1orf141Q5JVX7 400 aa15.55■□□□□ 0.08
CPNE1-222ENST00000473373 SULT6B1Q6IMI4 303 aa15.55■□□□□ 0.08
CPNE1-222ENST00000473373 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-222ENST00000473373 TUBGCP6Q96RT7 1819 aa15.54■□□□□ 0.08
CPNE1-222ENST00000473373 PER1O15534 1290 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-222ENST00000473373 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-222ENST00000473373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
CPNE1-222ENST00000473373 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
CPNE1-222ENST00000473373 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
CPNE1-222ENST00000473373 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
CPNE1-222ENST00000473373 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
CPNE1-222ENST00000473373 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
CPNE1-222ENST00000473373 KCNQ4P56696 695 aa15.53■□□□□ 0.08
CPNE1-222ENST00000473373 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
CPNE1-222ENST00000473373 AMOTQ4VCS5 1084 aa15.53■□□□□ 0.08
CPNE1-222ENST00000473373 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
CPNE1-222ENST00000473373 TFCP2L1Q9NZI6 479 aa15.53■□□□□ 0.08
CPNE1-222ENST00000473373 QSER1Q2KHR3 1735 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 HMOX1P09601 288 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 PHKG2P15735 406 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
CPNE1-222ENST00000473373 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 SMARCC1Q92922 1105 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-222ENST00000473373 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 PAPPAQ13219 1627 aa15.52■□□□□ 0.08
CPNE1-222ENST00000473373 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
CPNE1-222ENST00000473373 NPC1L1Q9UHC9 1359 aa15.51■□□□□ 0.07
CPNE1-222ENST00000473373 GPR162Q16538 588 aa15.51■□□□□ 0.07
CPNE1-222ENST00000473373 IL13P35225 146 aa15.5■□□□□ 0.07
CPNE1-222ENST00000473373 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
CPNE1-222ENST00000473373 C1QTNF8P60827 252 aa15.49■□□□□ 0.07
CPNE1-222ENST00000473373 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
CPNE1-222ENST00000473373 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
CPNE1-222ENST00000473373 CABP4P57796 275 aa15.48■□□□□ 0.07
CPNE1-222ENST00000473373 NKX1-1Q15270 411 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-222ENST00000473373 PIGBQ92521 554 aa15.48■□□□□ 0.07
CPNE1-222ENST00000473373 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
CPNE1-222ENST00000473373 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
CPNE1-222ENST00000473373 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms