RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 MAMSTRQ6ZN01 415 aa9.86□□□□□ -0.83
CKS1B-205ENST00000473344 MIER1Q8N108 512 aa9.86□□□□□ -0.83
CKS1B-205ENST00000473344 PDGFDQ9GZP0 370 aaPredicted RBP9.86□□□□□ -0.83
CKS1B-205ENST00000473344 GOLGB1Q14789 3259 aaKnown RBP9.86□□□□□ -0.83
CKS1B-205ENST00000473344 TRPM1Q7Z4N2 1603 aa9.85□□□□□ -0.83
CKS1B-205ENST00000473344 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
CKS1B-205ENST00000473344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.85□□□□□ -0.83
CKS1B-205ENST00000473344 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
CKS1B-205ENST00000473344 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
CKS1B-205ENST00000473344 MTFR1LQ9H019 292 aa9.84□□□□□ -0.83
CKS1B-205ENST00000473344 NLRP2Q9NX02 1062 aa9.84□□□□□ -0.83
CKS1B-205ENST00000473344 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
CKS1B-205ENST00000473344 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
CKS1B-205ENST00000473344 COL18A1P39060 1754 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 AKAP12Q02952 1782 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 TNS2Q63HR2 1409 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 IL2RBP14784 551 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 PTGER2P43116 358 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 SIN3AQ96ST3 1273 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 SYT17Q9BSW7 474 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 SBF2Q86WG5 1849 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
CKS1B-205ENST00000473344 ERBB3P21860 1342 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 POTEB2H3BUK9 544 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 HDGFL2Q7Z4V5 671 aaPredicted RBP9.82□□□□□ -0.84
CKS1B-205ENST00000473344 KIF12Q96FN5 646 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 NFAT5O94916 1531 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 ABCC6O95255 1503 aa9.82□□□□□ -0.84
CKS1B-205ENST00000473344 MYOM1P52179 1685 aa9.81□□□□□ -0.84
CKS1B-205ENST00000473344 ANKRD24Q8TF21 1146 aa9.81□□□□□ -0.84
CKS1B-205ENST00000473344 ARXQ96QS3 562 aa9.81□□□□□ -0.84
CKS1B-205ENST00000473344 USP31Q70CQ4 1352 aa9.8□□□□□ -0.84
CKS1B-205ENST00000473344 NME9Q86XW9 330 aa9.8□□□□□ -0.84
CKS1B-205ENST00000473344 ZNF784Q8NCA9 323 aaPredicted RBP9.8□□□□□ -0.84
CKS1B-205ENST00000473344 CARD11Q9BXL7 1154 aa9.8□□□□□ -0.84
CKS1B-205ENST00000473344 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
CKS1B-205ENST00000473344 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
CKS1B-205ENST00000473344 TERF2IPQ9NYB0 399 aa9.79□□□□□ -0.84
CKS1B-205ENST00000473344 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 SBNO2Q9Y2G9 1366 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 POLD1P28340 1107 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 TIE1P35590 1138 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 GPR162Q16538 588 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 SYTL4Q96C24 671 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-205ENST00000473344 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
CKS1B-205ENST00000473344 EDC4Q6P2E9 1401 aaKnown RBP9.77□□□□□ -0.85
CKS1B-205ENST00000473344 SLC27A3Q5K4L6 730 aa9.77□□□□□ -0.85
CKS1B-205ENST00000473344 LTV1Q96GA3 475 aaPredicted RBP9.77□□□□□ -0.85
CKS1B-205ENST00000473344 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
CKS1B-205ENST00000473344 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
CKS1B-205ENST00000473344 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
CKS1B-205ENST00000473344 SLC16A10Q8TF71 515 aa9.76□□□□□ -0.85
CKS1B-205ENST00000473344 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
CKS1B-205ENST00000473344 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
CKS1B-205ENST00000473344 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 IP6K1Q92551 441 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 COG3Q96JB2 828 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
CKS1B-205ENST00000473344 AMPHP49418 695 aa9.74□□□□□ -0.85
CKS1B-205ENST00000473344 ATN1P54259 1190 aaPredicted RBP9.74□□□□□ -0.85
CKS1B-205ENST00000473344 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
CKS1B-205ENST00000473344 LTN1O94822 1766 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
CKS1B-205ENST00000473344 C1QTNF8P60827 252 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
CKS1B-205ENST00000473344 USP54Q70EL1 1684 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 TONSLQ96HA7 1378 aa9.73□□□□□ -0.85
CKS1B-205ENST00000473344 BTAF1O14981 1849 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 MAP3K13O43283 966 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 GIGYF1O75420 1035 aaPredicted RBP9.72□□□□□ -0.85
CKS1B-205ENST00000473344 KCNQ4P56696 695 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 ZCRB1Q8TBF4 217 aaKnown RBP9.72□□□□□ -0.85
CKS1B-205ENST00000473344 PCDH10Q9P2E7 1040 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 PNPLA7Q6ZV29 1317 aa9.72□□□□□ -0.85
CKS1B-205ENST00000473344 HOXC9P31274 260 aa9.71□□□□□ -0.86
CKS1B-205ENST00000473344 BMP2KQ9NSY1 1161 aaPredicted RBP9.71□□□□□ -0.86
CKS1B-205ENST00000473344 CCNL1Q9UK58 526 aaPredicted RBP9.71□□□□□ -0.86
CKS1B-205ENST00000473344 MAP3K19Q56UN5 1328 aa9.71□□□□□ -0.86
CKS1B-205ENST00000473344 USP47Q96K76 1375 aa9.71□□□□□ -0.86
CKS1B-205ENST00000473344 CEP350Q5VT06 3117 aa9.71□□□□□ -0.86
CKS1B-205ENST00000473344 POTEMA6NI47 508 aa9.7□□□□□ -0.86
CKS1B-205ENST00000473344 HMGB2P26583 209 aaKnown RBP9.7□□□□□ -0.86
CKS1B-205ENST00000473344 RAPGEF4Q8WZA2 1011 aa9.7□□□□□ -0.86
CKS1B-205ENST00000473344 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
CKS1B-205ENST00000473344 SMG6Q86US8 1419 aaKnown RBP9.7□□□□□ -0.86
CKS1B-205ENST00000473344 FAM208AQ9UK61 1670 aaKnown RBP9.7□□□□□ -0.86
CKS1B-205ENST00000473344 GRIN3BO60391 1043 aa9.69□□□□□ -0.86
CKS1B-205ENST00000473344 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
CKS1B-205ENST00000473344 NLGN2Q8NFZ4 835 aa9.69□□□□□ -0.86
CKS1B-205ENST00000473344 ST20-MTHFSA0A0A6YYL1 179 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms