RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 NLRP6P59044 892 aa13.06□□□□□ -0.32
APTX-216ENST00000472896 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
APTX-216ENST00000472896 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
APTX-216ENST00000472896 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
APTX-216ENST00000472896 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
APTX-216ENST00000472896 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
APTX-216ENST00000472896 COL18A1P39060 1754 aa13.04□□□□□ -0.32
APTX-216ENST00000472896 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
APTX-216ENST00000472896 BCL9O00512 1426 aa13.04□□□□□ -0.32
APTX-216ENST00000472896 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
APTX-216ENST00000472896 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
APTX-216ENST00000472896 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
APTX-216ENST00000472896 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
APTX-216ENST00000472896 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
APTX-216ENST00000472896 CHD4Q14839 1912 aa13.03□□□□□ -0.32
APTX-216ENST00000472896 IFFO2Q5TF58 517 aa13.02□□□□□ -0.32
APTX-216ENST00000472896 ARXQ96QS3 562 aa13.02□□□□□ -0.32
APTX-216ENST00000472896 INSRP06213 1382 aa13.02□□□□□ -0.32
APTX-216ENST00000472896 EXOC5O00471 708 aa13.02□□□□□ -0.33
APTX-216ENST00000472896 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
APTX-216ENST00000472896 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
APTX-216ENST00000472896 TMC1Q8TDI8 760 aa13.02□□□□□ -0.33
APTX-216ENST00000472896 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
APTX-216ENST00000472896 SLIT3O75094 1523 aa13.01□□□□□ -0.33
APTX-216ENST00000472896 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
APTX-216ENST00000472896 USP6P35125 1406 aa13□□□□□ -0.33
APTX-216ENST00000472896 ACSBG1Q96GR2 724 aa13□□□□□ -0.33
APTX-216ENST00000472896 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 SOX12O15370 315 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 GPR162Q16538 588 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
APTX-216ENST00000472896 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
APTX-216ENST00000472896 RALBP1Q15311 655 aa12.98□□□□□ -0.33
APTX-216ENST00000472896 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
APTX-216ENST00000472896 AKAP12Q02952 1782 aa12.98□□□□□ -0.33
APTX-216ENST00000472896 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 CENPJQ9HC77 1338 aaPredicted RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
APTX-216ENST00000472896 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
APTX-216ENST00000472896 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
APTX-216ENST00000472896 PIK3C2AO00443 1686 aa12.96□□□□□ -0.33
APTX-216ENST00000472896 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.34
APTX-216ENST00000472896 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
APTX-216ENST00000472896 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
APTX-216ENST00000472896 CLCN1P35523 988 aa12.94□□□□□ -0.34
APTX-216ENST00000472896 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
APTX-216ENST00000472896 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
APTX-216ENST00000472896 KCNH5Q8NCM2 988 aa12.94□□□□□ -0.34
APTX-216ENST00000472896 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
APTX-216ENST00000472896 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
APTX-216ENST00000472896 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
APTX-216ENST00000472896 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
APTX-216ENST00000472896 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
APTX-216ENST00000472896 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
APTX-216ENST00000472896 UTRNP46939 3433 aa12.92□□□□□ -0.34
APTX-216ENST00000472896 KCNQ4P56696 695 aa12.92□□□□□ -0.34
APTX-216ENST00000472896 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 USP47Q96K76 1375 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
APTX-216ENST00000472896 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
APTX-216ENST00000472896 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
APTX-216ENST00000472896 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.34
APTX-216ENST00000472896 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
APTX-216ENST00000472896 NFAT5O94916 1531 aa12.9□□□□□ -0.34
APTX-216ENST00000472896 PNPLA7Q6ZV29 1317 aa12.9□□□□□ -0.34
APTX-216ENST00000472896 BTAF1O14981 1849 aa12.9□□□□□ -0.34
APTX-216ENST00000472896 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.35
APTX-216ENST00000472896 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
APTX-216ENST00000472896 SHANK3Q9BYB0 1731 aa12.89□□□□□ -0.35
APTX-216ENST00000472896 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
APTX-216ENST00000472896 IL2RBP14784 551 aa12.89□□□□□ -0.35
APTX-216ENST00000472896 BECN1Q14457 450 aa12.89□□□□□ -0.35
APTX-216ENST00000472896 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
APTX-216ENST00000472896 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
APTX-216ENST00000472896 POLD1P28340 1107 aa12.88□□□□□ -0.35
APTX-216ENST00000472896 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
APTX-216ENST00000472896 ERBB3P21860 1342 aa12.87□□□□□ -0.35
APTX-216ENST00000472896 ABCC6O95255 1503 aa12.87□□□□□ -0.35
APTX-216ENST00000472896 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
APTX-216ENST00000472896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
APTX-216ENST00000472896 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
APTX-216ENST00000472896 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
APTX-216ENST00000472896 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
APTX-216ENST00000472896 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
APTX-216ENST00000472896 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
APTX-216ENST00000472896 NME9Q86XW9 330 aa12.85□□□□□ -0.35
APTX-216ENST00000472896 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
APTX-216ENST00000472896 TPM2P07951 284 aa12.84□□□□□ -0.35
APTX-216ENST00000472896 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
APTX-216ENST00000472896 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms