RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PLEKHG2Q9H7P9 1386 aa18.87■□□□□ 0.61
HIF3A-206ENST00000472815 GNAT3A8MTJ3 354 aa18.86■□□□□ 0.61
HIF3A-206ENST00000472815 USHBP1Q8N6Y0 703 aa18.86■□□□□ 0.61
HIF3A-206ENST00000472815 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
HIF3A-206ENST00000472815 ZNF853P0CG23 659 aa18.86■□□□□ 0.61
HIF3A-206ENST00000472815 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
HIF3A-206ENST00000472815 EXOSC9Q06265 439 aaKnown RBP18.86■□□□□ 0.61
HIF3A-206ENST00000472815 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-206ENST00000472815 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
HIF3A-206ENST00000472815 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
HIF3A-206ENST00000472815 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
HIF3A-206ENST00000472815 RARSP54136 660 aaKnown RBP18.85■□□□□ 0.61
HIF3A-206ENST00000472815 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
HIF3A-206ENST00000472815 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
HIF3A-206ENST00000472815 MCM10Q7L590 875 aa18.83■□□□□ 0.6
HIF3A-206ENST00000472815 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
HIF3A-206ENST00000472815 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
HIF3A-206ENST00000472815 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
HIF3A-206ENST00000472815 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
HIF3A-206ENST00000472815 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
HIF3A-206ENST00000472815 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
HIF3A-206ENST00000472815 SPATA31A6Q5VVP1 1343 aa18.81■□□□□ 0.6
HIF3A-206ENST00000472815 PLIN1O60240 522 aa18.81■□□□□ 0.6
HIF3A-206ENST00000472815 BCAR3O75815 825 aa18.81■□□□□ 0.6
HIF3A-206ENST00000472815 MS4A1P11836 297 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 ALDH1L2Q3SY69 923 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
HIF3A-206ENST00000472815 CHL1O00533 1208 aa18.79■□□□□ 0.6
HIF3A-206ENST00000472815 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-206ENST00000472815 CRB1P82279 1406 aa18.79■□□□□ 0.6
HIF3A-206ENST00000472815 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
HIF3A-206ENST00000472815 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
HIF3A-206ENST00000472815 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
HIF3A-206ENST00000472815 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
HIF3A-206ENST00000472815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.6
HIF3A-206ENST00000472815 OVOS2A0A0G2JMS6 1433 aa18.77■□□□□ 0.6
HIF3A-206ENST00000472815 SPG7Q9UQ90 795 aa18.77■□□□□ 0.59
HIF3A-206ENST00000472815 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-206ENST00000472815 COL14A1Q05707 1796 aaKnown RBP18.76■□□□□ 0.59
HIF3A-206ENST00000472815 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-206ENST00000472815 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-206ENST00000472815 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
HIF3A-206ENST00000472815 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
HIF3A-206ENST00000472815 IPO8O15397 1037 aaKnown RBP18.75■□□□□ 0.59
HIF3A-206ENST00000472815 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
HIF3A-206ENST00000472815 PARP4Q9UKK3 1724 aaKnown RBP18.75■□□□□ 0.59
HIF3A-206ENST00000472815 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-206ENST00000472815 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-206ENST00000472815 EVA1CP58658 441 aa18.74■□□□□ 0.59
HIF3A-206ENST00000472815 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
HIF3A-206ENST00000472815 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-206ENST00000472815 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
HIF3A-206ENST00000472815 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
HIF3A-206ENST00000472815 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-206ENST00000472815 TOM1L2Q6ZVM7 507 aa18.74■□□□□ 0.59
HIF3A-206ENST00000472815 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
HIF3A-206ENST00000472815 VAMP4O75379 141 aa18.73■□□□□ 0.59
HIF3A-206ENST00000472815 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-206ENST00000472815 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-206ENST00000472815 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
HIF3A-206ENST00000472815 BCL2L13Q9BXK5 485 aa18.73■□□□□ 0.59
HIF3A-206ENST00000472815 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-206ENST00000472815 TEFQ10587 303 aa18.72■□□□□ 0.59
HIF3A-206ENST00000472815 AAMPQ13685 434 aa18.72■□□□□ 0.59
HIF3A-206ENST00000472815 IL17REQ8NFR9 667 aa18.72■□□□□ 0.59
HIF3A-206ENST00000472815 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
HIF3A-206ENST00000472815 C20orf194Q5TEA3 1177 aa18.71■□□□□ 0.59
HIF3A-206ENST00000472815 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
HIF3A-206ENST00000472815 LRP6O75581 1613 aa18.71■□□□□ 0.59
HIF3A-206ENST00000472815 CARD10Q9BWT7 1032 aa18.71■□□□□ 0.59
HIF3A-206ENST00000472815 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.59
HIF3A-206ENST00000472815 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.59
HIF3A-206ENST00000472815 NWD2Q9ULI1 1742 aa18.7■□□□□ 0.58
HIF3A-206ENST00000472815 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
HIF3A-206ENST00000472815 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
HIF3A-206ENST00000472815 B4GALNT3Q6L9W6 998 aa18.7■□□□□ 0.58
HIF3A-206ENST00000472815 MEGF6O75095 1541 aa18.7■□□□□ 0.58
HIF3A-206ENST00000472815 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
HIF3A-206ENST00000472815 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
HIF3A-206ENST00000472815 STRN4Q9NRL3 753 aa18.69■□□□□ 0.58
HIF3A-206ENST00000472815 ADAMTS7Q9UKP4 1686 aa18.68■□□□□ 0.58
HIF3A-206ENST00000472815 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
HIF3A-206ENST00000472815 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
HIF3A-206ENST00000472815 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
HIF3A-206ENST00000472815 DZIP1LQ8IYY4 767 aaKnown RBP18.68■□□□□ 0.58
HIF3A-206ENST00000472815 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
HIF3A-206ENST00000472815 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
HIF3A-206ENST00000472815 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
HIF3A-206ENST00000472815 SCN11AQ9UI33 1791 aa18.67■□□□□ 0.58
HIF3A-206ENST00000472815 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
HIF3A-206ENST00000472815 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
HIF3A-206ENST00000472815 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
HIF3A-206ENST00000472815 KDM3BQ7LBC6 1761 aa18.66■□□□□ 0.58
HIF3A-206ENST00000472815 IL2RBP14784 551 aa18.66■□□□□ 0.58
HIF3A-206ENST00000472815 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
HIF3A-206ENST00000472815 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
HIF3A-206ENST00000472815 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms