RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PLEKHD1A6NEE1 506 aa5.79□□□□□ -1.48
XRN1-209ENST00000472625 SH3RF1Q7Z6J0 888 aa5.79□□□□□ -1.48
XRN1-209ENST00000472625 WASF2Q9Y6W5 498 aa5.79□□□□□ -1.48
XRN1-209ENST00000472625 NUP153P49790 1475 aaKnown RBP5.78□□□□□ -1.48
XRN1-209ENST00000472625 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 USP17L8P0C7I0 530 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 FHOD3Q2V2M9 1422 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 FMN1Q68DA7 1419 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 CDK11AQ9UQ88 783 aaPredicted RBP5.78□□□□□ -1.48
XRN1-209ENST00000472625 ZMYM4Q5VZL5 1548 aa5.78□□□□□ -1.48
XRN1-209ENST00000472625 ARID4BQ4LE39 1312 aaPredicted RBP5.77□□□□□ -1.49
XRN1-209ENST00000472625 PCF11O94913 1555 aaKnown RBP5.77□□□□□ -1.49
XRN1-209ENST00000472625 PCMTD1Q96MG8 357 aaPredicted RBP5.77□□□□□ -1.49
XRN1-209ENST00000472625 ADAMTSL3P82987 1691 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 ZFYVE16Q7Z3T8 1539 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 NNTQ13423 1086 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 ARID5BQ14865 1188 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 NR6A1Q15406 480 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 SH3BP5LQ7L8J4 393 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 TRIM46Q7Z4K8 759 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 MTMR14Q8NCE2 650 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 FBXO41Q8TF61 875 aa5.76□□□□□ -1.49
XRN1-209ENST00000472625 CLIP1P30622 1438 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 HECW1Q76N89 1606 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 BCORL1Q5H9F3 1711 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 ARID3CA6NKF2 412 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 CAPN5O15484 640 aaPredicted RBP5.75□□□□□ -1.49
XRN1-209ENST00000472625 AP1G2O75843 785 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 VARSP26640 1264 aaKnown RBP5.75□□□□□ -1.49
XRN1-209ENST00000472625 AGERQ15109 404 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 HELBQ8NG08 1087 aaPredicted RBP5.75□□□□□ -1.49
XRN1-209ENST00000472625 TRIM47Q96LD4 638 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 C1QTNF2Q9BXJ5 285 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 FRMPD1Q5SYB0 1578 aa5.75□□□□□ -1.49
XRN1-209ENST00000472625 MADDQ8WXG6 1647 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 TREML4Q6UXN2 200 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 SNRKQ9NRH2 765 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 ATP1B4Q9UN42 357 aaPredicted RBP5.74□□□□□ -1.49
XRN1-209ENST00000472625 ZNF518AQ6AHZ1 1483 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.74□□□□□ -1.49
XRN1-209ENST00000472625 C9orf84Q5VXU9 1444 aa5.74□□□□□ -1.49
XRN1-209ENST00000472625 LMTK3Q96Q04 1460 aa5.73□□□□□ -1.49
XRN1-209ENST00000472625 NR3C2P08235 984 aa5.73□□□□□ -1.49
XRN1-209ENST00000472625 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
XRN1-209ENST00000472625 CARD14Q9BXL6 1004 aa5.73□□□□□ -1.49
XRN1-209ENST00000472625 KIF14Q15058 1648 aa5.73□□□□□ -1.49
XRN1-209ENST00000472625 PLCH2O75038 1416 aa5.73□□□□□ -1.49
XRN1-209ENST00000472625 RICTORQ6R327 1708 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 MAGEB6P1A0A0J9YX57 407 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 SOCS7O14512 581 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 TIMP2P16035 220 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 WDR4P57081 412 aaKnown RBP5.72□□□□□ -1.49
XRN1-209ENST00000472625 NFX1Q12986 1120 aaKnown RBP5.72□□□□□ -1.49
XRN1-209ENST00000472625 TMEM259Q4ZIN3 620 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 EFCAB2Q5VUJ9 269 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 MPNDQ8N594 471 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 FAM174AQ8TBP5 190 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 ZFAND3Q9H8U3 227 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 SENP2Q9HC62 589 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 FKBPLQ9UIM3 349 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 TTC37Q6PGP7 1564 aa5.72□□□□□ -1.49
XRN1-209ENST00000472625 CCDC18Q5T9S5 1454 aa5.71□□□□□ -1.49
XRN1-209ENST00000472625 SOBPA7XYQ1 873 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 WFS1O76024 890 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 ADH1CP00326 375 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 VEGFBP49765 207 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 BANK1Q8NDB2 785 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 CDK15Q96Q40 435 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 KLF16Q9BXK1 252 aaPredicted RBP5.71□□□□□ -1.5
XRN1-209ENST00000472625 SCAPERQ9BY12 1400 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 ATP10AO60312 1499 aa5.71□□□□□ -1.5
XRN1-209ENST00000472625 RIMS1Q86UR5 1692 aaKnown RBP5.7□□□□□ -1.5
XRN1-209ENST00000472625 GRM5P41594 1212 aa5.7□□□□□ -1.5
XRN1-209ENST00000472625 TRMT44Q8IYL2 757 aaKnown RBP5.7□□□□□ -1.5
XRN1-209ENST00000472625 ZFP42Q96MM3 310 aa5.7□□□□□ -1.5
XRN1-209ENST00000472625 PURBQ96QR8 312 aaKnown RBP5.7□□□□□ -1.5
XRN1-209ENST00000472625 TROQ12816 1431 aaPredicted RBP5.7□□□□□ -1.5
XRN1-209ENST00000472625 REREQ9P2R6 1566 aa5.7□□□□□ -1.5
XRN1-209ENST00000472625 ARHGAP5Q13017 1502 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 ARHGEF12Q9NZN5 1544 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 MYO5CQ9NQX4 1742 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 KDM5CP41229 1560 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 UHRF1BP1Q6BDS2 1440 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 CNTLNQ9NXG0 1405 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 ZIC2O95409 532 aaPredicted RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 UBTFP17480 764 aaKnown RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 FSHRP23945 695 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 ERFEQ4G0M1 354 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 PDXDC2PQ6P474 469 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 BPHLQ86WA6 291 aaPredicted RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 KIFC2Q96AC6 838 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 ITPKCQ96DU7 683 aa5.69□□□□□ -1.5
XRN1-209ENST00000472625 ESF1Q9H501 851 aaKnown RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 CDK13Q14004 1512 aaKnown RBP5.69□□□□□ -1.5
XRN1-209ENST00000472625 FER1L4A9Z1Z3 1794 aa5.68□□□□□ -1.5
XRN1-209ENST00000472625 YEATS2Q9ULM3 1422 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms