RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 ERBB3P21860 1342 aa23.42■■□□□ 1.34
PKD1-208ENST00000472577 YY1P25490 414 aa23.42■■□□□ 1.34
PKD1-208ENST00000472577 FLT4P35916 1363 aa23.41■■□□□ 1.34
PKD1-208ENST00000472577 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
PKD1-208ENST00000472577 ZBTB7AO95365 584 aa23.4■■□□□ 1.34
PKD1-208ENST00000472577 TXNRD1Q16881 649 aa23.4■■□□□ 1.34
PKD1-208ENST00000472577 EXOC5O00471 708 aa23.39■■□□□ 1.33
PKD1-208ENST00000472577 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
PKD1-208ENST00000472577 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
PKD1-208ENST00000472577 LTV1Q96GA3 475 aaPredicted RBP23.39■■□□□ 1.33
PKD1-208ENST00000472577 PAPPAQ13219 1627 aa23.39■■□□□ 1.33
PKD1-208ENST00000472577 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
PKD1-208ENST00000472577 INSRP06213 1382 aa23.39■■□□□ 1.33
PKD1-208ENST00000472577 PTGER2P43116 358 aa23.38■■□□□ 1.33
PKD1-208ENST00000472577 BTAF1O14981 1849 aa23.36■■□□□ 1.33
PKD1-208ENST00000472577 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
PKD1-208ENST00000472577 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
PKD1-208ENST00000472577 RGPD2P0DJD1 1756 aa23.35■■□□□ 1.33
PKD1-208ENST00000472577 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
PKD1-208ENST00000472577 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
PKD1-208ENST00000472577 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
PKD1-208ENST00000472577 ATF5Q9Y2D1 282 aaPredicted RBP23.34■■□□□ 1.33
PKD1-208ENST00000472577 MTHFSP49914 203 aa23.31■■□□□ 1.32
PKD1-208ENST00000472577 IL2RBP14784 551 aa23.3■■□□□ 1.32
PKD1-208ENST00000472577 NBPF6Q5VWK0 638 aa23.29■■□□□ 1.32
PKD1-208ENST00000472577 NBPF4Q96M43 638 aa23.29■■□□□ 1.32
PKD1-208ENST00000472577 EIF4A2Q14240 407 aaKnown RBP23.28■■□□□ 1.32
PKD1-208ENST00000472577 SGIP1Q9BQI5 828 aa23.28■■□□□ 1.32
PKD1-208ENST00000472577 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
PKD1-208ENST00000472577 FHDC1Q9C0D6 1143 aaPredicted RBP23.27■■□□□ 1.32
PKD1-208ENST00000472577 DCAF8L1A6NGE4 600 aa23.26■■□□□ 1.31
PKD1-208ENST00000472577 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
PKD1-208ENST00000472577 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
PKD1-208ENST00000472577 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
PKD1-208ENST00000472577 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
PKD1-208ENST00000472577 SHANK3Q9BYB0 1731 aa23.24■■□□□ 1.31
PKD1-208ENST00000472577 DOT1LQ8TEK3 1739 aa23.23■■□□□ 1.31
PKD1-208ENST00000472577 EYA1Q99502 592 aa23.23■■□□□ 1.31
PKD1-208ENST00000472577 SYT17Q9BSW7 474 aa23.23■■□□□ 1.31
PKD1-208ENST00000472577 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
PKD1-208ENST00000472577 COL3A1P02461 1466 aaPredicted RBP23.23■■□□□ 1.31
PKD1-208ENST00000472577 TUBGCP6Q96RT7 1819 aa23.22■■□□□ 1.31
PKD1-208ENST00000472577 IL13P35225 146 aa23.21■■□□□ 1.31
PKD1-208ENST00000472577 RALBP1Q15311 655 aa23.21■■□□□ 1.31
PKD1-208ENST00000472577 UTRNP46939 3433 aa23.2■■□□□ 1.3
PKD1-208ENST00000472577 MEGF6O75095 1541 aa23.2■■□□□ 1.3
PKD1-208ENST00000472577 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
PKD1-208ENST00000472577 KAT6BQ8WYB5 2073 aa23.19■■□□□ 1.3
PKD1-208ENST00000472577 IGSF1Q8N6C5 1336 aa23.18■■□□□ 1.3
PKD1-208ENST00000472577 DDX54Q8TDD1 881 aaKnown RBP23.18■■□□□ 1.3
PKD1-208ENST00000472577 DIAPH1O60610 1272 aaKnown RBP23.17■■□□□ 1.3
PKD1-208ENST00000472577 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
PKD1-208ENST00000472577 ARXQ96QS3 562 aa23.16■■□□□ 1.3
PKD1-208ENST00000472577 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
PKD1-208ENST00000472577 LY75O60449 1722 aa23.16■■□□□ 1.3
PKD1-208ENST00000472577 KCNQ4P56696 695 aa23.15■■□□□ 1.3
PKD1-208ENST00000472577 COL24A1Q17RW2 1714 aa23.15■■□□□ 1.3
PKD1-208ENST00000472577 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
PKD1-208ENST00000472577 ZNF784Q8NCA9 323 aaPredicted RBP23.14■■□□□ 1.29
PKD1-208ENST00000472577 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
PKD1-208ENST00000472577 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
PKD1-208ENST00000472577 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
PKD1-208ENST00000472577 AEBP1Q8IUX7 1158 aa23.13■■□□□ 1.29
PKD1-208ENST00000472577 PNPLA7Q6ZV29 1317 aa23.12■■□□□ 1.29
PKD1-208ENST00000472577 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
PKD1-208ENST00000472577 CHD4Q14839 1912 aa23.12■■□□□ 1.29
PKD1-208ENST00000472577 SYTL4Q96C24 671 aaPredicted RBP23.11■■□□□ 1.29
PKD1-208ENST00000472577 PRIM1P49642 420 aaKnown RBP23.1■■□□□ 1.29
PKD1-208ENST00000472577 SLC27A3Q5K4L6 730 aa23.1■■□□□ 1.29
PKD1-208ENST00000472577 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
PKD1-208ENST00000472577 KDRP35968 1356 aa23.1■■□□□ 1.29
PKD1-208ENST00000472577 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
PKD1-208ENST00000472577 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.29
PKD1-208ENST00000472577 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
PKD1-208ENST00000472577 HMOX1P09601 288 aa23.07■■□□□ 1.28
PKD1-208ENST00000472577 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
PKD1-208ENST00000472577 SLC16A10Q8TF71 515 aa23.04■■□□□ 1.28
PKD1-208ENST00000472577 TFCP2L1Q9NZI6 479 aa23.04■■□□□ 1.28
PKD1-208ENST00000472577 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
PKD1-208ENST00000472577 ANP32CO43423 234 aa23.03■■□□□ 1.28
PKD1-208ENST00000472577 PLEKHG2Q9H7P9 1386 aa23.02■■□□□ 1.28
PKD1-208ENST00000472577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.02■■□□□ 1.28
PKD1-208ENST00000472577 PCDH11XQ9BZA7 1347 aa23.02■■□□□ 1.28
PKD1-208ENST00000472577 PCDH11YQ9BZA8 1340 aa23.02■■□□□ 1.28
PKD1-208ENST00000472577 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
PKD1-208ENST00000472577 C5P01031 1676 aa23.01■■□□□ 1.27
PKD1-208ENST00000472577 CYP27B1O15528 508 aa23.01■■□□□ 1.27
PKD1-208ENST00000472577 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
PKD1-208ENST00000472577 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
PKD1-208ENST00000472577 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
PKD1-208ENST00000472577 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
PKD1-208ENST00000472577 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
PKD1-208ENST00000472577 POLD1P28340 1107 aa23■■□□□ 1.27
PKD1-208ENST00000472577 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
PKD1-208ENST00000472577 GPR162Q16538 588 aa22.99■■□□□ 1.27
PKD1-208ENST00000472577 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
PKD1-208ENST00000472577 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
PKD1-208ENST00000472577 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
PKD1-208ENST00000472577 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
PKD1-208ENST00000472577 COL23A1Q86Y22 540 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms