RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 GLRX3O76003 335 aaKnown RBP20.36■□□□□ 0.85
LAMP1-203ENST00000472564 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.36■□□□□ 0.85
LAMP1-203ENST00000472564 KIF6Q6ZMV9 814 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 AK7Q96M32 723 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 BMP2KLQ5H9B9 411 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 SCAF11Q99590 1463 aaKnown RBP20.35■□□□□ 0.85
LAMP1-203ENST00000472564 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
LAMP1-203ENST00000472564 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
LAMP1-203ENST00000472564 NME9Q86XW9 330 aa20.35■□□□□ 0.85
LAMP1-203ENST00000472564 OFD1O75665 1012 aa20.34■□□□□ 0.85
LAMP1-203ENST00000472564 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
LAMP1-203ENST00000472564 CUL7Q14999 1698 aa20.34■□□□□ 0.85
LAMP1-203ENST00000472564 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
LAMP1-203ENST00000472564 DHX8Q14562 1220 aaKnown RBP20.34■□□□□ 0.85
LAMP1-203ENST00000472564 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
LAMP1-203ENST00000472564 CABP4P57796 275 aa20.34■□□□□ 0.85
LAMP1-203ENST00000472564 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
LAMP1-203ENST00000472564 F6X3S4 739 aa20.33■□□□□ 0.85
LAMP1-203ENST00000472564 CEP57L1Q8IYX8 460 aa20.33■□□□□ 0.85
LAMP1-203ENST00000472564 MAP3K11Q16584 847 aa20.33■□□□□ 0.84
LAMP1-203ENST00000472564 SMARCE1Q969G3 411 aa20.33■□□□□ 0.84
LAMP1-203ENST00000472564 FKBP4Q02790 459 aaKnown RBP eCLIP20.33■□□□□ 0.84
LAMP1-203ENST00000472564 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.84
LAMP1-203ENST00000472564 TRIM22Q8IYM9 498 aa20.33■□□□□ 0.84
LAMP1-203ENST00000472564 CAGE1Q8TC20 777 aa20.32■□□□□ 0.84
LAMP1-203ENST00000472564 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
LAMP1-203ENST00000472564 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
LAMP1-203ENST00000472564 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
LAMP1-203ENST00000472564 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
LAMP1-203ENST00000472564 TXLNAP40222 546 aa20.31■□□□□ 0.84
LAMP1-203ENST00000472564 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
LAMP1-203ENST00000472564 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
LAMP1-203ENST00000472564 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
LAMP1-203ENST00000472564 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
LAMP1-203ENST00000472564 CTNNA3Q9UI47 895 aa20.3■□□□□ 0.84
LAMP1-203ENST00000472564 CCDC66A2RUB6 948 aa20.3■□□□□ 0.84
LAMP1-203ENST00000472564 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
LAMP1-203ENST00000472564 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
LAMP1-203ENST00000472564 NACAP1Q9BZK3 213 aa20.29■□□□□ 0.84
LAMP1-203ENST00000472564 CDR1P51861 262 aa20.28■□□□□ 0.84
LAMP1-203ENST00000472564 CAMK4Q16566 473 aa20.28■□□□□ 0.84
LAMP1-203ENST00000472564 EPS15P42566 896 aa20.27■□□□□ 0.84
LAMP1-203ENST00000472564 IDI1Q13907 227 aa20.27■□□□□ 0.84
LAMP1-203ENST00000472564 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
LAMP1-203ENST00000472564 NOM1Q5C9Z4 860 aaKnown RBP20.27■□□□□ 0.84
LAMP1-203ENST00000472564 CCDC183Q5T5S1 534 aa20.27■□□□□ 0.84
LAMP1-203ENST00000472564 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
LAMP1-203ENST00000472564 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
LAMP1-203ENST00000472564 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.83
LAMP1-203ENST00000472564 CCDC43Q96MW1 224 aaKnown RBP20.27■□□□□ 0.83
LAMP1-203ENST00000472564 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 MAGEC2Q9UBF1 373 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 DACH1Q9UI36 760 aa20.26■□□□□ 0.83
LAMP1-203ENST00000472564 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 LRRFIP2Q9Y608 721 aaKnown RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 SLC3A2P08195 630 aaKnown RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
LAMP1-203ENST00000472564 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 NSD2O96028 1365 aa20.26■□□□□ 0.83
LAMP1-203ENST00000472564 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-203ENST00000472564 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 CDKL5O76039 1030 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 BAG4O95429 457 aaKnown RBP20.25■□□□□ 0.83
LAMP1-203ENST00000472564 BOLA2Q9H3K6 86 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 DHX29Q7Z478 1369 aaKnown RBP20.25■□□□□ 0.83
LAMP1-203ENST00000472564 CWC15Q9P013 229 aaKnown RBP20.25■□□□□ 0.83
LAMP1-203ENST00000472564 KIF14Q15058 1648 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 IL16Q14005 1332 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
LAMP1-203ENST00000472564 CBFA2T2O43439 604 aa20.24■□□□□ 0.83
LAMP1-203ENST00000472564 TOM1L2Q6ZVM7 507 aa20.24■□□□□ 0.83
LAMP1-203ENST00000472564 PTPRCP08575 1304 aa20.24■□□□□ 0.83
LAMP1-203ENST00000472564 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
LAMP1-203ENST00000472564 GNL3LQ9NVN8 582 aaKnown RBP20.24■□□□□ 0.83
LAMP1-203ENST00000472564 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
LAMP1-203ENST00000472564 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
LAMP1-203ENST00000472564 PARD3Q8TEW0 1356 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 NOS1P29475 1434 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 FLIIQ13045 1269 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 C8orf34Q49A92 452 aa20.23■□□□□ 0.83
LAMP1-203ENST00000472564 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
LAMP1-203ENST00000472564 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
LAMP1-203ENST00000472564 WASLO00401 505 aaPredicted RBP20.22■□□□□ 0.83
LAMP1-203ENST00000472564 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
LAMP1-203ENST00000472564 GDPD2Q9HCC8 539 aa20.22■□□□□ 0.83
LAMP1-203ENST00000472564 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
LAMP1-203ENST00000472564 CDK5RAP3Q96JB5 506 aa20.22■□□□□ 0.83
LAMP1-203ENST00000472564 USP25Q9UHP3 1055 aa20.22■□□□□ 0.83
LAMP1-203ENST00000472564 NUCB1Q02818 461 aa20.21■□□□□ 0.83
LAMP1-203ENST00000472564 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
LAMP1-203ENST00000472564 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
LAMP1-203ENST00000472564 CT47A1Q5JQC4 288 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms