RNA–Protein interactions for RNA: ENST00000472503.5

TMEM39B-206, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 950 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-206ENST00000472503 KDRP35968 1356 aa17.2■□□□□ 0.34
TMEM39B-206ENST00000472503 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
TMEM39B-206ENST00000472503 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
TMEM39B-206ENST00000472503 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
TMEM39B-206ENST00000472503 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 EZH2Q15910 746 aaKnown RBP17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 FAM9BQ8IZU0 186 aa17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 RREB1Q92766 1687 aa17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
TMEM39B-206ENST00000472503 U2SURPO15042 1029 aaKnown RBP17.18■□□□□ 0.34
TMEM39B-206ENST00000472503 APBA3O96018 575 aa17.18■□□□□ 0.34
TMEM39B-206ENST00000472503 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
TMEM39B-206ENST00000472503 FCHSD2O94868 740 aa17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 DDB1Q16531 1140 aa17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
TMEM39B-206ENST00000472503 LRP5O75197 1615 aa17.16■□□□□ 0.34
TMEM39B-206ENST00000472503 SULT6B1Q6IMI4 303 aa17.15■□□□□ 0.34
TMEM39B-206ENST00000472503 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
TMEM39B-206ENST00000472503 HMOX1P09601 288 aa17.14■□□□□ 0.33
TMEM39B-206ENST00000472503 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
TMEM39B-206ENST00000472503 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
TMEM39B-206ENST00000472503 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
TMEM39B-206ENST00000472503 CDCA7Q9BWT1 371 aaPredicted RBP17.13■□□□□ 0.33
TMEM39B-206ENST00000472503 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
TMEM39B-206ENST00000472503 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
TMEM39B-206ENST00000472503 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
TMEM39B-206ENST00000472503 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
TMEM39B-206ENST00000472503 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
TMEM39B-206ENST00000472503 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
TMEM39B-206ENST00000472503 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
TMEM39B-206ENST00000472503 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
TMEM39B-206ENST00000472503 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
TMEM39B-206ENST00000472503 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
TMEM39B-206ENST00000472503 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
TMEM39B-206ENST00000472503 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
TMEM39B-206ENST00000472503 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
TMEM39B-206ENST00000472503 MEGF6O75095 1541 aa17.09■□□□□ 0.33
TMEM39B-206ENST00000472503 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
TMEM39B-206ENST00000472503 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
TMEM39B-206ENST00000472503 EXOC5O00471 708 aa17.07■□□□□ 0.32
TMEM39B-206ENST00000472503 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
TMEM39B-206ENST00000472503 KAT6BQ8WYB5 2073 aa17.06■□□□□ 0.32
TMEM39B-206ENST00000472503 APAF1O14727 1248 aa17.06■□□□□ 0.32
TMEM39B-206ENST00000472503 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
TMEM39B-206ENST00000472503 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
TMEM39B-206ENST00000472503 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
TMEM39B-206ENST00000472503 IL2RBP14784 551 aa17.04■□□□□ 0.32
TMEM39B-206ENST00000472503 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
TMEM39B-206ENST00000472503 PTF1AQ7RTS3 328 aa17.04■□□□□ 0.32
TMEM39B-206ENST00000472503 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
TMEM39B-206ENST00000472503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
TMEM39B-206ENST00000472503 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
TMEM39B-206ENST00000472503 NFE2L2Q16236 605 aa17.03■□□□□ 0.32
TMEM39B-206ENST00000472503 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
TMEM39B-206ENST00000472503 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
TMEM39B-206ENST00000472503 BCL9O00512 1426 aa17.03■□□□□ 0.32
TMEM39B-206ENST00000472503 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
TMEM39B-206ENST00000472503 ADAMTS7Q9UKP4 1686 aa17.02■□□□□ 0.32
TMEM39B-206ENST00000472503 BTAF1O14981 1849 aa17.01■□□□□ 0.31
TMEM39B-206ENST00000472503 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
TMEM39B-206ENST00000472503 NGEFQ8N5V2 710 aa17.01■□□□□ 0.31
TMEM39B-206ENST00000472503 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
TMEM39B-206ENST00000472503 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
TMEM39B-206ENST00000472503 CCDC27Q2M243 656 aa17■□□□□ 0.31
TMEM39B-206ENST00000472503 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
TMEM39B-206ENST00000472503 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
TMEM39B-206ENST00000472503 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
TMEM39B-206ENST00000472503 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 PLSCR1O15162 318 aa16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 NEFMP07197 916 aa16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
TMEM39B-206ENST00000472503 DOT1LQ8TEK3 1739 aa16.98■□□□□ 0.31
TMEM39B-206ENST00000472503 KCNQ2O43526 872 aa16.97■□□□□ 0.31
TMEM39B-206ENST00000472503 RIPK4P57078 832 aa16.97■□□□□ 0.31
TMEM39B-206ENST00000472503 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
TMEM39B-206ENST00000472503 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
TMEM39B-206ENST00000472503 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
TMEM39B-206ENST00000472503 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
TMEM39B-206ENST00000472503 CYP27B1O15528 508 aa16.96■□□□□ 0.31
TMEM39B-206ENST00000472503 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
TMEM39B-206ENST00000472503 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
TMEM39B-206ENST00000472503 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
TMEM39B-206ENST00000472503 SIPA1L3O60292 1781 aaPredicted RBP16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 CASZ1Q86V15 1759 aa16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
TMEM39B-206ENST00000472503 PHKG2P15735 406 aa16.94■□□□□ 0.3
TMEM39B-206ENST00000472503 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-206ENST00000472503 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms