RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 NBPF6Q5VWK0 638 aa26.58■■□□□ 1.85
RHBDF1-207ENST00000472390 NBPF4Q96M43 638 aa26.58■■□□□ 1.85
RHBDF1-207ENST00000472390 SYT17Q9BSW7 474 aa26.57■■□□□ 1.84
RHBDF1-207ENST00000472390 QSER1Q2KHR3 1735 aa26.56■■□□□ 1.84
RHBDF1-207ENST00000472390 RTL1A6NKG5 1358 aa26.56■■□□□ 1.84
RHBDF1-207ENST00000472390 AKT1S1Q96B36 256 aa26.55■■□□□ 1.84
RHBDF1-207ENST00000472390 TMF1P82094 1093 aa26.54■■□□□ 1.84
RHBDF1-207ENST00000472390 ZCRB1Q8TBF4 217 aaKnown RBP26.53■■□□□ 1.84
RHBDF1-207ENST00000472390 PNPLA7Q6ZV29 1317 aa26.53■■□□□ 1.84
RHBDF1-207ENST00000472390 DCAF8L1A6NGE4 600 aa26.52■■□□□ 1.84
RHBDF1-207ENST00000472390 UTRNP46939 3433 aa26.52■■□□□ 1.84
RHBDF1-207ENST00000472390 TOGARAM1Q9Y4F4 1720 aa26.51■■□□□ 1.83
RHBDF1-207ENST00000472390 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
RHBDF1-207ENST00000472390 HSP90AB2PQ58FF8 381 aa26.51■■□□□ 1.83
RHBDF1-207ENST00000472390 ARXQ96QS3 562 aa26.51■■□□□ 1.83
RHBDF1-207ENST00000472390 COL24A1Q17RW2 1714 aa26.5■■□□□ 1.83
RHBDF1-207ENST00000472390 KLHL34Q8N239 644 aa26.49■■□□□ 1.83
RHBDF1-207ENST00000472390 CARD14Q9BXL6 1004 aa26.49■■□□□ 1.83
RHBDF1-207ENST00000472390 NSD3Q9BZ95 1437 aa26.48■■□□□ 1.83
RHBDF1-207ENST00000472390 EMILIN1Q9Y6C2 1016 aa26.47■■□□□ 1.83
RHBDF1-207ENST00000472390 SLC27A3Q5K4L6 730 aa26.46■■□□□ 1.83
RHBDF1-207ENST00000472390 SMG6Q86US8 1419 aaKnown RBP26.46■■□□□ 1.83
RHBDF1-207ENST00000472390 C5P01031 1676 aa26.44■■□□□ 1.82
RHBDF1-207ENST00000472390 TFCP2L1Q9NZI6 479 aa26.44■■□□□ 1.82
RHBDF1-207ENST00000472390 INSRP06213 1382 aa26.44■■□□□ 1.82
RHBDF1-207ENST00000472390 FLT4P35916 1363 aa26.44■■□□□ 1.82
RHBDF1-207ENST00000472390 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
RHBDF1-207ENST00000472390 CHD4Q14839 1912 aa26.43■■□□□ 1.82
RHBDF1-207ENST00000472390 PKD1L3Q7Z443 1732 aa26.42■■□□□ 1.82
RHBDF1-207ENST00000472390 ANKRD26Q9UPS8 1709 aa26.42■■□□□ 1.82
RHBDF1-207ENST00000472390 ITGB4P16144 1822 aa26.42■■□□□ 1.82
RHBDF1-207ENST00000472390 RAPGEF4Q8WZA2 1011 aa26.42■■□□□ 1.82
RHBDF1-207ENST00000472390 MAP3K5Q99683 1374 aa26.41■■□□□ 1.82
RHBDF1-207ENST00000472390 TAF1LQ8IZX4 1826 aa26.41■■□□□ 1.82
RHBDF1-207ENST00000472390 TATP17735 454 aaPredicted RBP26.4■■□□□ 1.82
RHBDF1-207ENST00000472390 NLGN2Q8NFZ4 835 aa26.4■■□□□ 1.82
RHBDF1-207ENST00000472390 MSL1Q68DK7 614 aa26.39■■□□□ 1.82
RHBDF1-207ENST00000472390 ZNF784Q8NCA9 323 aaPredicted RBP26.39■■□□□ 1.82
RHBDF1-207ENST00000472390 CYP27B1O15528 508 aa26.38■■□□□ 1.81
RHBDF1-207ENST00000472390 SLC24A1O60721 1099 aa26.38■■□□□ 1.81
RHBDF1-207ENST00000472390 MAP2P11137 1827 aaKnown RBP26.37■■□□□ 1.81
RHBDF1-207ENST00000472390 PPM1GO15355 546 aaPredicted RBP26.37■■□□□ 1.81
RHBDF1-207ENST00000472390 COL23A1Q86Y22 540 aaPredicted RBP26.37■■□□□ 1.81
RHBDF1-207ENST00000472390 MSH5O43196 834 aa26.36■■□□□ 1.81
RHBDF1-207ENST00000472390 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
RHBDF1-207ENST00000472390 PCDH11XQ9BZA7 1347 aa26.36■■□□□ 1.81
RHBDF1-207ENST00000472390 PCDH11YQ9BZA8 1340 aa26.36■■□□□ 1.81
RHBDF1-207ENST00000472390 SMIM5Q71RC9 77 aa26.35■■□□□ 1.81
RHBDF1-207ENST00000472390 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
RHBDF1-207ENST00000472390 PALLDQ8WX93 1383 aa26.34■■□□□ 1.81
RHBDF1-207ENST00000472390 POLD1P28340 1107 aa26.34■■□□□ 1.81
RHBDF1-207ENST00000472390 MPRIPQ6WCQ1 1025 aa26.34■■□□□ 1.81
RHBDF1-207ENST00000472390 AMIGO3Q86WK7 504 aa26.34■■□□□ 1.81
RHBDF1-207ENST00000472390 SLC16A10Q8TF71 515 aa26.34■■□□□ 1.81
RHBDF1-207ENST00000472390 NCAPD2Q15021 1401 aa26.33■■□□□ 1.81
RHBDF1-207ENST00000472390 CGNL1Q0VF96 1302 aa26.33■■□□□ 1.81
RHBDF1-207ENST00000472390 GOLGB1Q14789 3259 aaKnown RBP26.32■■□□□ 1.8
RHBDF1-207ENST00000472390 C4BP0C0L5 1744 aa26.32■■□□□ 1.8
RHBDF1-207ENST00000472390 GPR162Q16538 588 aa26.32■■□□□ 1.8
RHBDF1-207ENST00000472390 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
RHBDF1-207ENST00000472390 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
RHBDF1-207ENST00000472390 KIF24Q5T7B8 1368 aa26.31■■□□□ 1.8
RHBDF1-207ENST00000472390 TNNT2P45379 298 aaPredicted RBP26.29■■□□□ 1.8
RHBDF1-207ENST00000472390 UBR3Q6ZT12 1888 aa26.28■■□□□ 1.8
RHBDF1-207ENST00000472390 EYA1Q99502 592 aa26.27■■□□□ 1.8
RHBDF1-207ENST00000472390 YBX3P16989 372 aaKnown RBP eCLIP26.25■■□□□ 1.79
RHBDF1-207ENST00000472390 PIGBQ92521 554 aa26.25■■□□□ 1.79
RHBDF1-207ENST00000472390 POLKQ9UBT6 870 aa26.25■■□□□ 1.79
RHBDF1-207ENST00000472390 WASHC2AQ641Q2 1341 aa26.23■■□□□ 1.79
RHBDF1-207ENST00000472390 PHF14O94880 888 aa26.22■■□□□ 1.79
RHBDF1-207ENST00000472390 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.78
RHBDF1-207ENST00000472390 LINC00116Q8NCU8 138 aa26.2■■□□□ 1.78
RHBDF1-207ENST00000472390 WWC3Q9ULE0 1092 aa26.19■■□□□ 1.78
RHBDF1-207ENST00000472390 HSPA5P11021 654 aaKnown RBP26.18■■□□□ 1.78
RHBDF1-207ENST00000472390 NKX1-1Q15270 411 aaPredicted RBP26.17■■□□□ 1.78
RHBDF1-207ENST00000472390 AK7Q96M32 723 aa26.17■■□□□ 1.78
RHBDF1-207ENST00000472390 ASAP1Q9ULH1 1129 aa26.17■■□□□ 1.78
RHBDF1-207ENST00000472390 SPG7Q9UQ90 795 aa26.17■■□□□ 1.78
RHBDF1-207ENST00000472390 PHKG2P15735 406 aa26.16■■□□□ 1.78
RHBDF1-207ENST00000472390 ITPK1Q13572 414 aa26.16■■□□□ 1.78
RHBDF1-207ENST00000472390 SMARCC1Q92922 1105 aaPredicted RBP26.15■■□□□ 1.78
RHBDF1-207ENST00000472390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.13■■□□□ 1.77
RHBDF1-207ENST00000472390 LOC102724428A0A0B4J2F2 783 aa26.13■■□□□ 1.77
RHBDF1-207ENST00000472390 SIK1P57059 783 aa26.13■■□□□ 1.77
RHBDF1-207ENST00000472390 TMOD3Q9NYL9 352 aa26.13■■□□□ 1.77
RHBDF1-207ENST00000472390 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
RHBDF1-207ENST00000472390 PANK3Q9H999 370 aa26.12■■□□□ 1.77
RHBDF1-207ENST00000472390 ATG3Q9NT62 314 aa26.1■■□□□ 1.77
RHBDF1-207ENST00000472390 IGSF1Q8N6C5 1336 aa26.1■■□□□ 1.77
RHBDF1-207ENST00000472390 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
RHBDF1-207ENST00000472390 C1QTNF8P60827 252 aa26.09■■□□□ 1.77
RHBDF1-207ENST00000472390 IFNL2Q8IZJ0 200 aa26.09■■□□□ 1.77
RHBDF1-207ENST00000472390 CLSPNQ9HAW4 1339 aa26.09■■□□□ 1.77
RHBDF1-207ENST00000472390 KDRP35968 1356 aa26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 KDM6AO15550 1401 aaPredicted RBP26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 GNPATO15228 680 aa26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 AEBP1Q8IUX7 1158 aa26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 FLAD1Q8NFF5 587 aa26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 SLC4A9Q96Q91 983 aa26.08■■□□□ 1.77
RHBDF1-207ENST00000472390 ATP6V1AP38606 617 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms