RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 REC8O95072 547 aa18.24■□□□□ 0.51
FXR1-209ENST00000472339 PKP1Q13835 747 aa18.24■□□□□ 0.51
FXR1-209ENST00000472339 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
FXR1-209ENST00000472339 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
FXR1-209ENST00000472339 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
FXR1-209ENST00000472339 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
FXR1-209ENST00000472339 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
FXR1-209ENST00000472339 PRPF40AO75400 957 aaKnown RBP18.23■□□□□ 0.51
FXR1-209ENST00000472339 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
FXR1-209ENST00000472339 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
FXR1-209ENST00000472339 GPT2Q8TD30 523 aa18.22■□□□□ 0.51
FXR1-209ENST00000472339 MCM5P33992 734 aa18.22■□□□□ 0.51
FXR1-209ENST00000472339 CEP85Q6P2H3 762 aa18.22■□□□□ 0.51
FXR1-209ENST00000472339 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
FXR1-209ENST00000472339 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
FXR1-209ENST00000472339 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
FXR1-209ENST00000472339 NEO1Q92859 1461 aa18.21■□□□□ 0.51
FXR1-209ENST00000472339 LRSAM1Q6UWE0 723 aa18.21■□□□□ 0.51
FXR1-209ENST00000472339 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
FXR1-209ENST00000472339 RGS12O14924 1447 aa18.21■□□□□ 0.51
FXR1-209ENST00000472339 ERC2O15083 957 aa18.2■□□□□ 0.5
FXR1-209ENST00000472339 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.2■□□□□ 0.5
FXR1-209ENST00000472339 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
FXR1-209ENST00000472339 ZKSCAN5Q9Y2L8 839 aa18.19■□□□□ 0.5
FXR1-209ENST00000472339 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
FXR1-209ENST00000472339 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
FXR1-209ENST00000472339 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
FXR1-209ENST00000472339 RAPGEF3O95398 923 aa18.18■□□□□ 0.5
FXR1-209ENST00000472339 MBD3O95983 291 aa18.18■□□□□ 0.5
FXR1-209ENST00000472339 MAP7D2Q96T17 732 aa18.18■□□□□ 0.5
FXR1-209ENST00000472339 PTPRCP08575 1304 aa18.18■□□□□ 0.5
FXR1-209ENST00000472339 TMEM63CQ9P1W3 806 aa18.17■□□□□ 0.5
FXR1-209ENST00000472339 R3HCC1Q9Y3T6 440 aaKnown RBP18.17■□□□□ 0.5
FXR1-209ENST00000472339 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
FXR1-209ENST00000472339 MCM2P49736 904 aa18.17■□□□□ 0.5
FXR1-209ENST00000472339 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
FXR1-209ENST00000472339 MSH6P52701 1360 aa18.17■□□□□ 0.5
FXR1-209ENST00000472339 OSBPL3Q9H4L5 887 aa18.16■□□□□ 0.5
FXR1-209ENST00000472339 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
FXR1-209ENST00000472339 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
FXR1-209ENST00000472339 NME9Q86XW9 330 aa18.16■□□□□ 0.5
FXR1-209ENST00000472339 HMMRO75330 724 aa18.15■□□□□ 0.5
FXR1-209ENST00000472339 SYCE3A1L190 88 aa18.14■□□□□ 0.5
FXR1-209ENST00000472339 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
FXR1-209ENST00000472339 COG3Q96JB2 828 aa18.14■□□□□ 0.49
FXR1-209ENST00000472339 RICTORQ6R327 1708 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 CHL1O00533 1208 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 MEIS3Q99687 375 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 APBB1O00213 710 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 BRD1O95696 1058 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
FXR1-209ENST00000472339 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
FXR1-209ENST00000472339 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
FXR1-209ENST00000472339 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
FXR1-209ENST00000472339 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
FXR1-209ENST00000472339 CUL4AQ13619 759 aa18.12■□□□□ 0.49
FXR1-209ENST00000472339 NSFL1CQ9UNZ2 370 aaKnown RBP18.12■□□□□ 0.49
FXR1-209ENST00000472339 NEK4P51957 841 aa18.11■□□□□ 0.49
FXR1-209ENST00000472339 PDE1AP54750 535 aa18.11■□□□□ 0.49
FXR1-209ENST00000472339 ZRANB1Q9UGI0 708 aa18.11■□□□□ 0.49
FXR1-209ENST00000472339 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
FXR1-209ENST00000472339 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
FXR1-209ENST00000472339 UQCRHLA0A096LP55 91 aa18.1■□□□□ 0.49
FXR1-209ENST00000472339 UQCRHP07919 91 aa18.1■□□□□ 0.49
FXR1-209ENST00000472339 MCCP23508 829 aa18.1■□□□□ 0.49
FXR1-209ENST00000472339 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
FXR1-209ENST00000472339 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
FXR1-209ENST00000472339 INTS4Q96HW7 963 aaKnown RBP18.1■□□□□ 0.49
FXR1-209ENST00000472339 WASLO00401 505 aaPredicted RBP18.1■□□□□ 0.49
FXR1-209ENST00000472339 DYNC1I1O14576 645 aa18.1■□□□□ 0.49
FXR1-209ENST00000472339 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
FXR1-209ENST00000472339 ANAPC15P60006 121 aa18.09■□□□□ 0.49
FXR1-209ENST00000472339 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
FXR1-209ENST00000472339 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
FXR1-209ENST00000472339 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
FXR1-209ENST00000472339 CPS1P31327 1500 aa18.09■□□□□ 0.49
FXR1-209ENST00000472339 SASS6Q6UVJ0 657 aa18.08■□□□□ 0.49
FXR1-209ENST00000472339 CHAMP1Q96JM3 812 aa18.08■□□□□ 0.49
FXR1-209ENST00000472339 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.49
FXR1-209ENST00000472339 TUBGCP6Q96RT7 1819 aa18.08■□□□□ 0.49
FXR1-209ENST00000472339 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.48
FXR1-209ENST00000472339 C3P01024 1663 aa18.08■□□□□ 0.48
FXR1-209ENST00000472339 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
FXR1-209ENST00000472339 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
FXR1-209ENST00000472339 CCT4P50991 539 aaKnown RBP18.07■□□□□ 0.48
FXR1-209ENST00000472339 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
FXR1-209ENST00000472339 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
FXR1-209ENST00000472339 IL17RAQ96F46 866 aa18.07■□□□□ 0.48
FXR1-209ENST00000472339 PHF14O94880 888 aa18.06■□□□□ 0.48
FXR1-209ENST00000472339 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
FXR1-209ENST00000472339 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FXR1-209ENST00000472339 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
FXR1-209ENST00000472339 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.05■□□□□ 0.48
FXR1-209ENST00000472339 SALL3Q9BXA9 1300 aa18.05■□□□□ 0.48
FXR1-209ENST00000472339 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
FXR1-209ENST00000472339 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
FXR1-209ENST00000472339 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
FXR1-209ENST00000472339 RNF214Q8ND24 703 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms