RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	CAMTA1	Q9Y6Y1	1673 aa		13.91	□□□□□ -0.18
MRPS18B-208	ENST00000472267	ABCC6	O95255	1503 aa		13.91	□□□□□ -0.18
MRPS18B-208	ENST00000472267	MAP3K5	Q99683	1374 aa		13.9	□□□□□ -0.18
MRPS18B-208	ENST00000472267	CANX	P27824	592 aa	Known RBP	13.9	□□□□□ -0.18
MRPS18B-208	ENST00000472267	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.9	□□□□□ -0.18
MRPS18B-208	ENST00000472267	EXOC6	Q8TAG9	804 aa		13.9	□□□□□ -0.18
MRPS18B-208	ENST00000472267	C20orf194	Q5TEA3	1177 aa		13.9	□□□□□ -0.19
MRPS18B-208	ENST00000472267	PHLPP1	O60346	1717 aa		13.9	□□□□□ -0.19
MRPS18B-208	ENST00000472267	NCAPD2	Q15021	1401 aa		13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	UBAP1L	F5GYI3	381 aa		13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	HTATSF1	O43719	755 aa	Known RBP	13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	CT47B1	P0C2W7	299 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	FRAT1	Q92837	279 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	CRBN	Q96SW2	442 aa		13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	LMO7	Q8WWI1	1683 aa		13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	FAM208A	Q9UK61	1670 aa	Known RBP	13.89	□□□□□ -0.19
MRPS18B-208	ENST00000472267	RAPGEF4	Q8WZA2	1011 aa		13.88	□□□□□ -0.19
MRPS18B-208	ENST00000472267	CRB1	P82279	1406 aa		13.88	□□□□□ -0.19
MRPS18B-208	ENST00000472267	ELL2	O00472	640 aa	Predicted RBP	13.87	□□□□□ -0.19
MRPS18B-208	ENST00000472267	AMOT	Q4VCS5	1084 aa		13.87	□□□□□ -0.19
MRPS18B-208	ENST00000472267	B4GALNT3	Q6L9W6	998 aa		13.87	□□□□□ -0.19
MRPS18B-208	ENST00000472267	SMC4	Q9NTJ3	1288 aa		13.87	□□□□□ -0.19
MRPS18B-208	ENST00000472267	MIS18A	Q9NYP9	233 aa		13.87	□□□□□ -0.19
MRPS18B-208	ENST00000472267	CHL1	O00533	1208 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	TAT	P17735	454 aa	Predicted RBP	13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	STRN4	Q9NRL3	753 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	EVA1C	P58658	441 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	C1orf141	Q5JVX7	400 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	TOM1L2	Q6ZVM7	507 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	TSPYL6	Q8N831	410 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	IL17RE	Q8NFR9	667 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	SSH1	Q8WYL5	1049 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	TSPYL4	Q9UJ04	414 aa		13.86	□□□□□ -0.19
MRPS18B-208	ENST00000472267	AKAP4	Q5JQC9	854 aa		13.85	□□□□□ -0.19
MRPS18B-208	ENST00000472267	C8orf58	Q8NAV2	365 aa		13.85	□□□□□ -0.19
MRPS18B-208	ENST00000472267	WDR17	Q8IZU2	1322 aa		13.85	□□□□□ -0.19
MRPS18B-208	ENST00000472267	COL16A1	Q07092	1604 aa	Predicted RBP	13.85	□□□□□ -0.19
MRPS18B-208	ENST00000472267	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.85	□□□□□ -0.19
MRPS18B-208	ENST00000472267	COL5A2	P05997	1499 aa	Predicted RBP	13.84	□□□□□ -0.19
MRPS18B-208	ENST00000472267	VAMP4	O75379	141 aa		13.84	□□□□□ -0.19
MRPS18B-208	ENST00000472267	TWISTNB	Q3B726	338 aa	Predicted RBP	13.84	□□□□□ -0.19
MRPS18B-208	ENST00000472267	LRRC37A3	O60309	1634 aa		13.84	□□□□□ -0.19
MRPS18B-208	ENST00000472267	MPRIP	Q6WCQ1	1025 aa		13.83	□□□□□ -0.2
MRPS18B-208	ENST00000472267	CCDC136	Q96JN2	1154 aa		13.83	□□□□□ -0.2
MRPS18B-208	ENST00000472267	LGR6	Q9HBX8	967 aa		13.83	□□□□□ -0.2
MRPS18B-208	ENST00000472267	MEGF6	O75095	1541 aa		13.83	□□□□□ -0.2
MRPS18B-208	ENST00000472267	TCERG1	O14776	1098 aa	Known RBP	13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	KRT24	Q2M2I5	525 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PANK1	Q8TE04	598 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	SPG7	Q9UQ90	795 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	VIRMA	Q69YN4	1812 aa	Known RBP	13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	TAF7	Q15545	349 aa	Predicted RBP	13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	ALDH1L2	Q3SY69	923 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	LARP1	Q6PKG0	1096 aa	Known RBP	13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	BTG4	Q9NY30	223 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	TNN	Q9UQP3	1299 aa		13.82	□□□□□ -0.2
MRPS18B-208	ENST00000472267	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	NUTM2E	B1AL46	878 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	RNMT	O43148	476 aa	Known RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PDE3A	Q14432	1141 aa		13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	ZKSCAN2	Q63HK3	967 aa		13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	CLUAP1	Q96AJ1	413 aa		13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	ZNF428	Q96B54	188 aa		13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	NOB1	Q9ULX3	412 aa	Known RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	COL14A1	Q05707	1796 aa	Known RBP	13.81	□□□□□ -0.2
MRPS18B-208	ENST00000472267	CEMIP	Q8WUJ3	1361 aa		13.8	□□□□□ -0.2
MRPS18B-208	ENST00000472267	ADAMTS2	O95450	1211 aa		13.8	□□□□□ -0.2
MRPS18B-208	ENST00000472267	TEF	Q10587	303 aa		13.8	□□□□□ -0.2
MRPS18B-208	ENST00000472267	CERK	Q8TCT0	537 aa		13.8	□□□□□ -0.2
MRPS18B-208	ENST00000472267	CARD10	Q9BWT7	1032 aa		13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	COG6	Q9Y2V7	657 aa		13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	KIF16B	Q96L93	1317 aa		13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	FTSJ3	Q8IY81	847 aa	Known RBP	13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	MRPL50	Q8N5N7	158 aa	Known RBP	13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	USP35	Q9P2H5	1018 aa		13.79	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PARP4	Q9UKK3	1724 aa	Known RBP	13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	IPO8	O15397	1037 aa	Known RBP	13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	RLBP1	P12271	317 aa		13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PHKG2	P15735	406 aa		13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PELP1	Q8IZL8	1130 aa	Known RBP	13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	BABAM1	Q9NWV8	329 aa		13.78	□□□□□ -0.2
MRPS18B-208	ENST00000472267	PKD1L3	Q7Z443	1732 aa		13.77	□□□□□ -0.2
MRPS18B-208	ENST00000472267	DZIP1L	Q8IYY4	767 aa	Known RBP	13.77	□□□□□ -0.21
MRPS18B-208	ENST00000472267	IFNL2	Q8IZJ0	200 aa		13.77	□□□□□ -0.21
MRPS18B-208	ENST00000472267	OVOS2	A0A0G2JMS6	1433 aa		13.77	□□□□□ -0.21
MRPS18B-208	ENST00000472267	BTBD11	A6QL63	1104 aa		13.76	□□□□□ -0.21
MRPS18B-208	ENST00000472267	MS4A1	P11836	297 aa		13.76	□□□□□ -0.21
MRPS18B-208	ENST00000472267	TRIM27	P14373	513 aa		13.76	□□□□□ -0.21
MRPS18B-208	ENST00000472267	IL2RB	P14784	551 aa		13.76	□□□□□ -0.21
MRPS18B-208	ENST00000472267	ATF7IP	Q6VMQ6	1270 aa		13.76	□□□□□ -0.21
MRPS18B-208	ENST00000472267	CYP27B1	O15528	508 aa		13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	ZCRB1	Q8TBF4	217 aa	Known RBP	13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	SCN11A	Q9UI33	1791 aa		13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	PLCH1	Q4KWH8	1693 aa		13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	BRPF1	P55201	1214 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	KDM3B	Q7LBC6	1761 aa		13.75	□□□□□ -0.21
MRPS18B-208	ENST00000472267	PLEKHG2	Q9H7P9	1386 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms