RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 DDB1Q16531 1140 aa16.38■□□□□ 0.21
CLRN1-205ENST00000472224 ARHGEF25Q86VW2 580 aa16.38■□□□□ 0.21
CLRN1-205ENST00000472224 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
CLRN1-205ENST00000472224 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
CLRN1-205ENST00000472224 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
CLRN1-205ENST00000472224 ABCC6O95255 1503 aa16.37■□□□□ 0.21
CLRN1-205ENST00000472224 ARXQ96QS3 562 aa16.37■□□□□ 0.21
CLRN1-205ENST00000472224 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
CLRN1-205ENST00000472224 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
CLRN1-205ENST00000472224 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
CLRN1-205ENST00000472224 FYB1O15117 783 aa16.35■□□□□ 0.21
CLRN1-205ENST00000472224 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
CLRN1-205ENST00000472224 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
CLRN1-205ENST00000472224 PANK3Q9H999 370 aa16.34■□□□□ 0.21
CLRN1-205ENST00000472224 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
CLRN1-205ENST00000472224 FBLN1P23142 703 aa16.33■□□□□ 0.2
CLRN1-205ENST00000472224 GPR162Q16538 588 aa16.33■□□□□ 0.2
CLRN1-205ENST00000472224 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
CLRN1-205ENST00000472224 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
CLRN1-205ENST00000472224 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
CLRN1-205ENST00000472224 WDR17Q8IZU2 1322 aa16.31■□□□□ 0.2
CLRN1-205ENST00000472224 AMPHP49418 695 aa16.31■□□□□ 0.2
CLRN1-205ENST00000472224 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
CLRN1-205ENST00000472224 BTAF1O14981 1849 aa16.31■□□□□ 0.2
CLRN1-205ENST00000472224 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
CLRN1-205ENST00000472224 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
CLRN1-205ENST00000472224 CCDC7Q96M83 1385 aa16.3■□□□□ 0.2
CLRN1-205ENST00000472224 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
CLRN1-205ENST00000472224 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
CLRN1-205ENST00000472224 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
CLRN1-205ENST00000472224 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
CLRN1-205ENST00000472224 ANKRD24Q8TF21 1146 aa16.29■□□□□ 0.2
CLRN1-205ENST00000472224 ERBB3P21860 1342 aa16.28■□□□□ 0.2
CLRN1-205ENST00000472224 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
CLRN1-205ENST00000472224 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
CLRN1-205ENST00000472224 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
CLRN1-205ENST00000472224 IP6K1Q92551 441 aa16.27■□□□□ 0.2
CLRN1-205ENST00000472224 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.2
CLRN1-205ENST00000472224 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
CLRN1-205ENST00000472224 TNS2Q63HR2 1409 aa16.27■□□□□ 0.19
CLRN1-205ENST00000472224 HOXC9P31274 260 aa16.26■□□□□ 0.19
CLRN1-205ENST00000472224 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
CLRN1-205ENST00000472224 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
CLRN1-205ENST00000472224 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
CLRN1-205ENST00000472224 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
CLRN1-205ENST00000472224 CARD10Q9BWT7 1032 aa16.25■□□□□ 0.19
CLRN1-205ENST00000472224 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
CLRN1-205ENST00000472224 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
CLRN1-205ENST00000472224 NSD2O96028 1365 aa16.24■□□□□ 0.19
CLRN1-205ENST00000472224 ATP10DQ9P241 1426 aa16.23■□□□□ 0.19
CLRN1-205ENST00000472224 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
CLRN1-205ENST00000472224 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CLRN1-205ENST00000472224 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
CLRN1-205ENST00000472224 EMILIN1Q9Y6C2 1016 aa16.23■□□□□ 0.19
CLRN1-205ENST00000472224 FLT4P35916 1363 aa16.23■□□□□ 0.19
CLRN1-205ENST00000472224 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLRN1-205ENST00000472224 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
CLRN1-205ENST00000472224 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
CLRN1-205ENST00000472224 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
CLRN1-205ENST00000472224 EXOC5O00471 708 aa16.2■□□□□ 0.18
CLRN1-205ENST00000472224 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
CLRN1-205ENST00000472224 INSRP06213 1382 aa16.19■□□□□ 0.18
CLRN1-205ENST00000472224 HSPA6P17066 643 aa16.19■□□□□ 0.18
CLRN1-205ENST00000472224 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
CLRN1-205ENST00000472224 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CLRN1-205ENST00000472224 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
CLRN1-205ENST00000472224 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
CLRN1-205ENST00000472224 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
CLRN1-205ENST00000472224 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
CLRN1-205ENST00000472224 IL2RBP14784 551 aa16.17■□□□□ 0.18
CLRN1-205ENST00000472224 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
CLRN1-205ENST00000472224 SLC16A10Q8TF71 515 aa16.17■□□□□ 0.18
CLRN1-205ENST00000472224 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
CLRN1-205ENST00000472224 ADCY9O60503 1353 aa16.16■□□□□ 0.18
CLRN1-205ENST00000472224 POLD1P28340 1107 aa16.16■□□□□ 0.18
CLRN1-205ENST00000472224 LY75O60449 1722 aa16.16■□□□□ 0.18
CLRN1-205ENST00000472224 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
CLRN1-205ENST00000472224 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
CLRN1-205ENST00000472224 MEGF6O75095 1541 aa16.14■□□□□ 0.17
CLRN1-205ENST00000472224 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
CLRN1-205ENST00000472224 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
CLRN1-205ENST00000472224 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
CLRN1-205ENST00000472224 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
CLRN1-205ENST00000472224 DOT1LQ8TEK3 1739 aa16.11■□□□□ 0.17
CLRN1-205ENST00000472224 KCNQ4P56696 695 aa16.11■□□□□ 0.17
CLRN1-205ENST00000472224 ZNF526Q8TF50 670 aaPredicted RBP16.11■□□□□ 0.17
CLRN1-205ENST00000472224 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
CLRN1-205ENST00000472224 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
CLRN1-205ENST00000472224 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
CLRN1-205ENST00000472224 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
CLRN1-205ENST00000472224 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
CLRN1-205ENST00000472224 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
CLRN1-205ENST00000472224 TFCP2L1Q9NZI6 479 aa16.09■□□□□ 0.17
CLRN1-205ENST00000472224 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
CLRN1-205ENST00000472224 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
CLRN1-205ENST00000472224 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
CLRN1-205ENST00000472224 EYA1Q99502 592 aa16.07■□□□□ 0.16
CLRN1-205ENST00000472224 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
CLRN1-205ENST00000472224 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
CLRN1-205ENST00000472224 MTHFSP49914 203 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms