RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 EXOC5O00471 708 aa22.28■■□□□ 1.16
CCM2-205ENST00000472223 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
CCM2-205ENST00000472223 NCAPD2Q15021 1401 aa22.28■■□□□ 1.16
CCM2-205ENST00000472223 CCDC146Q8IYE0 955 aa22.27■■□□□ 1.16
CCM2-205ENST00000472223 PARP4Q9UKK3 1724 aaKnown RBP22.27■■□□□ 1.16
CCM2-205ENST00000472223 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
CCM2-205ENST00000472223 GAS2L2Q8NHY3 880 aa22.26■■□□□ 1.15
CCM2-205ENST00000472223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCM2-205ENST00000472223 DDB1Q16531 1140 aa22.25■■□□□ 1.15
CCM2-205ENST00000472223 ZCRB1Q8TBF4 217 aaKnown RBP22.25■■□□□ 1.15
CCM2-205ENST00000472223 C1orf141Q5JVX7 400 aa22.24■■□□□ 1.15
CCM2-205ENST00000472223 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
CCM2-205ENST00000472223 PDE3BQ13370 1112 aa22.22■■□□□ 1.15
CCM2-205ENST00000472223 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
CCM2-205ENST00000472223 WNK3Q9BYP7 1800 aa22.22■■□□□ 1.15
CCM2-205ENST00000472223 OVOS2A0A0G2JMS6 1433 aa22.22■■□□□ 1.15
CCM2-205ENST00000472223 MEGF6O75095 1541 aa22.21■■□□□ 1.15
CCM2-205ENST00000472223 PCDH11XQ9BZA7 1347 aa22.21■■□□□ 1.15
CCM2-205ENST00000472223 PCDH11YQ9BZA8 1340 aa22.21■■□□□ 1.15
CCM2-205ENST00000472223 GLI3P10071 1580 aa22.21■■□□□ 1.15
CCM2-205ENST00000472223 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
CCM2-205ENST00000472223 ZNF530Q6P9A1 599 aaPredicted RBP22.2■■□□□ 1.14
CCM2-205ENST00000472223 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
CCM2-205ENST00000472223 LMOD3Q0VAK6 560 aa22.19■■□□□ 1.14
CCM2-205ENST00000472223 NFE2L2Q16236 605 aa22.19■■□□□ 1.14
CCM2-205ENST00000472223 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
CCM2-205ENST00000472223 SEPT12Q8IYM1 358 aa22.19■■□□□ 1.14
CCM2-205ENST00000472223 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
CCM2-205ENST00000472223 DDX54Q8TDD1 881 aaKnown RBP22.19■■□□□ 1.14
CCM2-205ENST00000472223 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
CCM2-205ENST00000472223 DISP2A7MBM2 1401 aa22.19■■□□□ 1.14
CCM2-205ENST00000472223 APAF1O14727 1248 aa22.18■■□□□ 1.14
CCM2-205ENST00000472223 HSP90AB1P08238 724 aaKnown RBP22.18■■□□□ 1.14
CCM2-205ENST00000472223 NEUROD2Q15784 382 aa22.18■■□□□ 1.14
CCM2-205ENST00000472223 POTEAQ6S8J7 498 aa22.18■■□□□ 1.14
CCM2-205ENST00000472223 NGEFQ8N5V2 710 aa22.18■■□□□ 1.14
CCM2-205ENST00000472223 RIPK4P57078 832 aa22.17■■□□□ 1.14
CCM2-205ENST00000472223 AKAP4Q5JQC9 854 aa22.17■■□□□ 1.14
CCM2-205ENST00000472223 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
CCM2-205ENST00000472223 PKD1L3Q7Z443 1732 aa22.15■■□□□ 1.14
CCM2-205ENST00000472223 GNAT3A8MTJ3 354 aa22.15■■□□□ 1.14
CCM2-205ENST00000472223 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
CCM2-205ENST00000472223 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
CCM2-205ENST00000472223 PHKG2P15735 406 aa22.13■■□□□ 1.13
CCM2-205ENST00000472223 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
CCM2-205ENST00000472223 MAP3K5Q99683 1374 aa22.12■■□□□ 1.13
CCM2-205ENST00000472223 THSD7AQ9UPZ6 1657 aa22.12■■□□□ 1.13
CCM2-205ENST00000472223 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCM2-205ENST00000472223 LRRC37A3O60309 1634 aa22.11■■□□□ 1.13
CCM2-205ENST00000472223 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
CCM2-205ENST00000472223 KRT27Q7Z3Y8 459 aa22.11■■□□□ 1.13
CCM2-205ENST00000472223 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
CCM2-205ENST00000472223 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
CCM2-205ENST00000472223 CYP27B1O15528 508 aa22.09■■□□□ 1.13
CCM2-205ENST00000472223 CALD1Q05682 793 aaKnown RBP22.09■■□□□ 1.13
CCM2-205ENST00000472223 DLG5Q8TDM6 1919 aa22.08■■□□□ 1.12
CCM2-205ENST00000472223 MPRIPQ6WCQ1 1025 aa22.07■■□□□ 1.12
CCM2-205ENST00000472223 KAT6BQ8WYB5 2073 aa22.07■■□□□ 1.12
CCM2-205ENST00000472223 SENP3-EIF4A1A0A087X0R7 540 aa22.06■■□□□ 1.12
CCM2-205ENST00000472223 TEFQ10587 303 aa22.06■■□□□ 1.12
CCM2-205ENST00000472223 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
CCM2-205ENST00000472223 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
CCM2-205ENST00000472223 MARCH10Q8NA82 808 aaPredicted RBP22.06■■□□□ 1.12
CCM2-205ENST00000472223 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
CCM2-205ENST00000472223 SHANK3Q9BYB0 1731 aa22.05■■□□□ 1.12
CCM2-205ENST00000472223 RNMTO43148 476 aaKnown RBP22.04■■□□□ 1.12
CCM2-205ENST00000472223 FAM196AQ6ZSG2 479 aa22.04■■□□□ 1.12
CCM2-205ENST00000472223 MCM10Q7L590 875 aa22.04■■□□□ 1.12
CCM2-205ENST00000472223 RGS12O14924 1447 aa22.04■■□□□ 1.12
CCM2-205ENST00000472223 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
CCM2-205ENST00000472223 ERVV-2B6SEH9 535 aa22.03■■□□□ 1.12
CCM2-205ENST00000472223 CABP4P57796 275 aa22.03■■□□□ 1.12
CCM2-205ENST00000472223 WWC1Q8IX03 1113 aa22.02■■□□□ 1.12
CCM2-205ENST00000472223 SYTL4Q96C24 671 aaPredicted RBP22.02■■□□□ 1.12
CCM2-205ENST00000472223 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.12
CCM2-205ENST00000472223 DCTN1Q14203 1278 aa22.01■■□□□ 1.11
CCM2-205ENST00000472223 LGR6Q9HBX8 967 aa22.01■■□□□ 1.11
CCM2-205ENST00000472223 WDR63Q8IWG1 891 aa22■■□□□ 1.11
CCM2-205ENST00000472223 IL17REQ8NFR9 667 aa22■■□□□ 1.11
CCM2-205ENST00000472223 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
CCM2-205ENST00000472223 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
CCM2-205ENST00000472223 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
CCM2-205ENST00000472223 FAM182BQ5T319 152 aa21.98■■□□□ 1.11
CCM2-205ENST00000472223 SLC52A2Q9HAB3 445 aa21.98■■□□□ 1.11
CCM2-205ENST00000472223 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
CCM2-205ENST00000472223 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
CCM2-205ENST00000472223 ACSBG1Q96GR2 724 aa21.97■■□□□ 1.11
CCM2-205ENST00000472223 ZBED9Q6R2W3 1325 aa21.97■■□□□ 1.11
CCM2-205ENST00000472223 PRIM1P49642 420 aaKnown RBP21.96■■□□□ 1.11
CCM2-205ENST00000472223 GNAI1P63096 354 aa21.96■■□□□ 1.11
CCM2-205ENST00000472223 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
CCM2-205ENST00000472223 NFATC2IPQ8NCF5 419 aa21.96■■□□□ 1.11
CCM2-205ENST00000472223 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
CCM2-205ENST00000472223 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
CCM2-205ENST00000472223 BCL9O00512 1426 aa21.96■■□□□ 1.11
CCM2-205ENST00000472223 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
CCM2-205ENST00000472223 IL16Q14005 1332 aa21.95■■□□□ 1.1
CCM2-205ENST00000472223 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
CCM2-205ENST00000472223 BABAM1Q9NWV8 329 aa21.94■■□□□ 1.1
CCM2-205ENST00000472223 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms