RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 PTPREP23469 700 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 GPR162Q16538 588 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 HS3ST6Q96QI5 342 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 LMTK2Q8IWU2 1503 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 DLC1Q96QB1 1528 aa6.94□□□□□ -1.3
LMNB1-205ENST00000472034 CEP162Q5TB80 1403 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 OSBPP22059 807 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 PBX2P40425 430 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
LMNB1-205ENST00000472034 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
LMNB1-205ENST00000472034 ZNF526Q8TF50 670 aaPredicted RBP6.93□□□□□ -1.3
LMNB1-205ENST00000472034 BCL2L12Q9HB09 334 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 RRP7BPQ9NSQ0 103 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 KIF15Q9NS87 1388 aa6.93□□□□□ -1.3
LMNB1-205ENST00000472034 NUTM2FA1L443 756 aa6.92□□□□□ -1.3
LMNB1-205ENST00000472034 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
LMNB1-205ENST00000472034 KANK1Q14678 1352 aa6.92□□□□□ -1.3
LMNB1-205ENST00000472034 POTEMA6NI47 508 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 LMOD2Q6P5Q4 547 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 POTEGQ6S5H5 508 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 FAM196AQ6ZSG2 479 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.91□□□□□ -1.3
LMNB1-205ENST00000472034 ADAM33Q9BZ11 813 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 SPATA31A3Q5VYP0 1347 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 ROBO2Q9HCK4 1378 aa6.91□□□□□ -1.3
LMNB1-205ENST00000472034 ABCA3Q99758 1704 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 HTRA3P83110 453 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 GPIHBP1Q8IV16 184 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 BTG4Q9NY30 223 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 SPATA31A5Q5VU36 1347 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 SPATA31A7Q8IWB4 1347 aa6.9□□□□□ -1.3
LMNB1-205ENST00000472034 ERBINQ96RT1 1412 aa6.9□□□□□ -1.31
LMNB1-205ENST00000472034 RBM26Q5T8P6 1007 aaKnown RBP6.89□□□□□ -1.31
LMNB1-205ENST00000472034 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
LMNB1-205ENST00000472034 GPBP1L1Q9HC44 474 aaPredicted RBP6.89□□□□□ -1.31
LMNB1-205ENST00000472034 FCHSD2O94868 740 aa6.88□□□□□ -1.31
LMNB1-205ENST00000472034 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.313e-9■□□□□ 10.7
LMNB1-205ENST00000472034 PTF1AQ7RTS3 328 aa6.88□□□□□ -1.31
LMNB1-205ENST00000472034 WWC3Q9ULE0 1092 aa6.88□□□□□ -1.31
LMNB1-205ENST00000472034 PPP1R3GB7ZBB8 358 aa6.87□□□□□ -1.31
LMNB1-205ENST00000472034 APLP1P51693 650 aa6.87□□□□□ -1.31
LMNB1-205ENST00000472034 ARXQ96QS3 562 aa6.87□□□□□ -1.31
LMNB1-205ENST00000472034 TNS2Q63HR2 1409 aa6.86□□□□□ -1.31
LMNB1-205ENST00000472034 TSR1Q2NL82 804 aaKnown RBP6.86□□□□□ -1.31
LMNB1-205ENST00000472034 NLGN2Q8NFZ4 835 aa6.86□□□□□ -1.31
LMNB1-205ENST00000472034 CROCC2H7BZ55 1655 aa6.86□□□□□ -1.31
LMNB1-205ENST00000472034 NEXMIFQ5QGS0 1516 aa6.86□□□□□ -1.31
LMNB1-205ENST00000472034 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
LMNB1-205ENST00000472034 KRT28Q7Z3Y7 464 aa6.85□□□□□ -1.31
LMNB1-205ENST00000472034 STAC3Q96MF2 364 aa6.85□□□□□ -1.31
LMNB1-205ENST00000472034 MTFR1LQ9H019 292 aa6.85□□□□□ -1.31
LMNB1-205ENST00000472034 TECPR2O15040 1411 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 PSEN2P49810 448 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 HIC1Q14526 733 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 FAM161AQ3B820 660 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 CDAN1Q8IWY9 1227 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 JMYQ8N9B5 988 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 AXIN2Q9Y2T1 843 aa6.84□□□□□ -1.31
LMNB1-205ENST00000472034 ABCC5O15440 1437 aa6.84□□□□□ -1.32
LMNB1-205ENST00000472034 ADCY9O60503 1353 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 CDC42BPGQ6DT37 1551 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 SPATA31A1Q5TZJ5 1347 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 POTEB3A0JP26 581 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 PTGDRQ13258 359 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 POTEBQ6S5H4 581 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 PACS2Q86VP3 889 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 KLRG1Q96E93 195 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 RBM27Q9P2N5 1060 aaKnown RBP6.83□□□□□ -1.32
LMNB1-205ENST00000472034 CCDC144AA2RUR9 1427 aa6.83□□□□□ -1.32
LMNB1-205ENST00000472034 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
LMNB1-205ENST00000472034 WDR90Q96KV7 1748 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 TK2O00142 265 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 GNPATO15228 680 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 PRIM1P49642 420 aaKnown RBP6.82□□□□□ -1.32
LMNB1-205ENST00000472034 PRSS12P56730 875 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 LSM11P83369 360 aaKnown RBP eCLIP6.82□□□□□ -1.325e-7■■■■□ 20.7
LMNB1-205ENST00000472034 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 SLC4A5Q9BY07 1137 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 CDHR5Q9HBB8 845 aa6.82□□□□□ -1.32
LMNB1-205ENST00000472034 COL14A1Q05707 1796 aaKnown RBP6.82□□□□□ -1.32
LMNB1-205ENST00000472034 COL9A1P20849 921 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 SLC15A2Q16348 729 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 KRI1Q8N9T8 703 aaKnown RBP6.81□□□□□ -1.32
LMNB1-205ENST00000472034 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 CHIC2Q9UKJ5 165 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 NAIPQ13075 1403 aa6.81□□□□□ -1.32
LMNB1-205ENST00000472034 RRBP1Q9P2E9 1410 aaKnown RBP6.81□□□□□ -1.32
LMNB1-205ENST00000472034 RGPD3A6NKT7 1758 aaPredicted RBP6.8□□□□□ -1.32
LMNB1-205ENST00000472034 RGPD4Q7Z3J3 1758 aa6.8□□□□□ -1.32
LMNB1-205ENST00000472034 TRIM6-TRIM34B2RNG4 842 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms