RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MSH5O43196 834 aa27.15■■□□□ 1.94
SORT1-203ENST00000471996 HDGFL2Q7Z4V5 671 aaPredicted RBP27.15■■□□□ 1.94
SORT1-203ENST00000471996 TMC1Q8TDI8 760 aa27.14■■□□□ 1.94
SORT1-203ENST00000471996 LTV1Q96GA3 475 aaPredicted RBP27.14■■□□□ 1.94
SORT1-203ENST00000471996 GPBP1L1Q9HC44 474 aaPredicted RBP27.13■■□□□ 1.93
SORT1-203ENST00000471996 EDC4Q6P2E9 1401 aaKnown RBP27.12■■□□□ 1.93
SORT1-203ENST00000471996 LY75O60449 1722 aa27.11■■□□□ 1.93
SORT1-203ENST00000471996 HSPA6P17066 643 aa27.11■■□□□ 1.93
SORT1-203ENST00000471996 MSL1Q68DK7 614 aa27.11■■□□□ 1.93
SORT1-203ENST00000471996 SLC12A5Q9H2X9 1139 aa27.11■■□□□ 1.93
SORT1-203ENST00000471996 CD2APQ9Y5K6 639 aa27.11■■□□□ 1.93
SORT1-203ENST00000471996 ZCRB1Q8TBF4 217 aaKnown RBP27.1■■□□□ 1.93
SORT1-203ENST00000471996 ADCY9O60503 1353 aa27.08■■□□□ 1.93
SORT1-203ENST00000471996 USP47Q96K76 1375 aa27.08■■□□□ 1.93
SORT1-203ENST00000471996 DOT1LQ8TEK3 1739 aa27.07■■□□□ 1.92
SORT1-203ENST00000471996 TERF2IPQ9NYB0 399 aa27.07■■□□□ 1.92
SORT1-203ENST00000471996 FAM208AQ9UK61 1670 aaKnown RBP27.06■■□□□ 1.92
SORT1-203ENST00000471996 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
SORT1-203ENST00000471996 A0A1W2PP64 1363 aa27.05■■□□□ 1.92
SORT1-203ENST00000471996 ZNF526Q8TF50 670 aaPredicted RBP27.04■■□□□ 1.92
SORT1-203ENST00000471996 MEGF6O75095 1541 aa27.03■■□□□ 1.92
SORT1-203ENST00000471996 HOXC9P31274 260 aa27.03■■□□□ 1.92
SORT1-203ENST00000471996 MAP3K19Q56UN5 1328 aa27.03■■□□□ 1.92
SORT1-203ENST00000471996 FLAD1Q8NFF5 587 aa27.03■■□□□ 1.92
SORT1-203ENST00000471996 HMGB2P26583 209 aaKnown RBP27.01■■□□□ 1.91
SORT1-203ENST00000471996 AMPHP49418 695 aa27■■□□□ 1.91
SORT1-203ENST00000471996 NEUROD1Q13562 356 aa26.98■■□□□ 1.91
SORT1-203ENST00000471996 COG3Q96JB2 828 aa26.98■■□□□ 1.91
SORT1-203ENST00000471996 PUS7Q96PZ0 661 aaKnown RBP26.98■■□□□ 1.91
SORT1-203ENST00000471996 CGNL1Q0VF96 1302 aa26.97■■□□□ 1.91
SORT1-203ENST00000471996 FBLN1P23142 703 aa26.97■■□□□ 1.91
SORT1-203ENST00000471996 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
SORT1-203ENST00000471996 NBPF6Q5VWK0 638 aa26.95■■□□□ 1.9
SORT1-203ENST00000471996 NBPF4Q96M43 638 aa26.95■■□□□ 1.9
SORT1-203ENST00000471996 PALLDQ8WX93 1383 aa26.94■■□□□ 1.9
SORT1-203ENST00000471996 IGSF1Q8N6C5 1336 aa26.93■■□□□ 1.9
SORT1-203ENST00000471996 KIF3CO14782 793 aa26.93■■□□□ 1.9
SORT1-203ENST00000471996 C5P01031 1676 aa26.92■■□□□ 1.9
SORT1-203ENST00000471996 RAPGEF4Q8WZA2 1011 aa26.92■■□□□ 1.9
SORT1-203ENST00000471996 RTL1A6NKG5 1358 aa26.9■■□□□ 1.9
SORT1-203ENST00000471996 USHBP1Q8N6Y0 703 aa26.9■■□□□ 1.9
SORT1-203ENST00000471996 WWC3Q9ULE0 1092 aa26.9■■□□□ 1.9
SORT1-203ENST00000471996 MPRIPQ6WCQ1 1025 aa26.89■■□□□ 1.9
SORT1-203ENST00000471996 AMIGO3Q86WK7 504 aa26.89■■□□□ 1.9
SORT1-203ENST00000471996 AK7Q96M32 723 aa26.89■■□□□ 1.9
SORT1-203ENST00000471996 RGPD2P0DJD1 1756 aa26.89■■□□□ 1.89
SORT1-203ENST00000471996 TATP17735 454 aaPredicted RBP26.88■■□□□ 1.89
SORT1-203ENST00000471996 PCDH11XQ9BZA7 1347 aa26.88■■□□□ 1.89
SORT1-203ENST00000471996 PCDH11YQ9BZA8 1340 aa26.88■■□□□ 1.89
SORT1-203ENST00000471996 RRS1Q15050 365 aaKnown RBP26.87■■□□□ 1.89
SORT1-203ENST00000471996 APLP1P51693 650 aa26.86■■□□□ 1.89
SORT1-203ENST00000471996 SMARCC1Q92922 1105 aaPredicted RBP26.86■■□□□ 1.89
SORT1-203ENST00000471996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.85■■□□□ 1.89
SORT1-203ENST00000471996 PHF14O94880 888 aa26.85■■□□□ 1.89
SORT1-203ENST00000471996 C4BP0C0L5 1744 aa26.84■■□□□ 1.89
SORT1-203ENST00000471996 SMG6Q86US8 1419 aaKnown RBP26.83■■□□□ 1.89
SORT1-203ENST00000471996 NSD3Q9BZ95 1437 aa26.83■■□□□ 1.89
SORT1-203ENST00000471996 SMIM5Q71RC9 77 aa26.83■■□□□ 1.89
SORT1-203ENST00000471996 TAF1LQ8IZX4 1826 aa26.83■■□□□ 1.89
SORT1-203ENST00000471996 CYP27B1O15528 508 aa26.82■■□□□ 1.88
SORT1-203ENST00000471996 SSFA2P28290 1259 aa26.81■■□□□ 1.88
SORT1-203ENST00000471996 DNAJC5GQ8N7S2 189 aa26.81■■□□□ 1.88
SORT1-203ENST00000471996 TOGARAM1Q9Y4F4 1720 aa26.8■■□□□ 1.88
SORT1-203ENST00000471996 TOMM70O94826 608 aa26.79■■□□□ 1.88
SORT1-203ENST00000471996 HSP90AB2PQ58FF8 381 aa26.78■■□□□ 1.88
SORT1-203ENST00000471996 PIGBQ92521 554 aa26.78■■□□□ 1.88
SORT1-203ENST00000471996 TESK2Q96S53 571 aa26.78■■□□□ 1.88
SORT1-203ENST00000471996 CICQ96RK0 1608 aaPredicted RBP26.77■■□□□ 1.88
SORT1-203ENST00000471996 INSRP06213 1382 aa26.77■■□□□ 1.88
SORT1-203ENST00000471996 FYB1O15117 783 aa26.77■■□□□ 1.88
SORT1-203ENST00000471996 LINC00116Q8NCU8 138 aa26.76■■□□□ 1.87
SORT1-203ENST00000471996 GGNBP2Q9H3C7 697 aa26.76■■□□□ 1.87
SORT1-203ENST00000471996 UBR3Q6ZT12 1888 aa26.75■■□□□ 1.87
SORT1-203ENST00000471996 LOC102724428A0A0B4J2F2 783 aa26.74■■□□□ 1.87
SORT1-203ENST00000471996 SIK1P57059 783 aa26.74■■□□□ 1.87
SORT1-203ENST00000471996 NKX1-1Q15270 411 aaPredicted RBP26.73■■□□□ 1.87
SORT1-203ENST00000471996 FLT4P35916 1363 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 PXDNLA1KZ92 1463 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 ST20-MTHFSA0A0A6YYL1 179 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 GNPATO15228 680 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 SLC24A1O60721 1099 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 MMP10P09238 476 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 TGFB2P61812 414 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 KIF24Q5T7B8 1368 aa26.71■■□□□ 1.87
SORT1-203ENST00000471996 ITPK1Q13572 414 aa26.69■■□□□ 1.86
SORT1-203ENST00000471996 BCS1LQ9Y276 419 aa26.69■■□□□ 1.86
SORT1-203ENST00000471996 ITGB4P16144 1822 aa26.68■■□□□ 1.86
SORT1-203ENST00000471996 NMRK2Q9NPI5 230 aa26.68■■□□□ 1.86
SORT1-203ENST00000471996 MAP2P11137 1827 aaKnown RBP26.67■■□□□ 1.86
SORT1-203ENST00000471996 A0A0G2JLW4 131 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 ATP6V1AP38606 617 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 ARHGAP27Q6ZUM4 889 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 TMOD3Q9NYL9 352 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 ASAP1Q9ULH1 1129 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 SPG7Q9UQ90 795 aa26.66■■□□□ 1.86
SORT1-203ENST00000471996 RBM46Q8TBY0 533 aaKnown RBP26.64■■□□□ 1.86
SORT1-203ENST00000471996 PKD1L3Q7Z443 1732 aa26.64■■□□□ 1.85
SORT1-203ENST00000471996 NCAPD2Q15021 1401 aa26.63■■□□□ 1.85
SORT1-203ENST00000471996 NLGN1Q8N2Q7 840 aa26.62■■□□□ 1.85
SORT1-203ENST00000471996 KLRG1Q96E93 195 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms