RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
CD46-213ENST00000471987 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
CD46-213ENST00000471987 LYSMD3Q7Z3D4 306 aa10.87□□□□□ -0.67
CD46-213ENST00000471987 RNF144AP50876 292 aaPredicted RBP10.86□□□□□ -0.67
CD46-213ENST00000471987 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
CD46-213ENST00000471987 SCTRP47872 440 aa10.85□□□□□ -0.67
CD46-213ENST00000471987 IRF5Q13568 498 aa10.85□□□□□ -0.67
CD46-213ENST00000471987 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
CD46-213ENST00000471987 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
CD46-213ENST00000471987 MEN1O00255 615 aa10.84□□□□□ -0.67
CD46-213ENST00000471987 ITGA6P23229 1130 aa10.84□□□□□ -0.67
CD46-213ENST00000471987 GPC1P35052 558 aa10.84□□□□□ -0.67
CD46-213ENST00000471987 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
CD46-213ENST00000471987 LORP23490 312 aaPredicted RBP10.83□□□□□ -0.68
CD46-213ENST00000471987 TRAK2O60296 914 aa10.82□□□□□ -0.68
CD46-213ENST00000471987 MCM6Q14566 821 aa10.82□□□□□ -0.68
CD46-213ENST00000471987 PRICKLE2Q7Z3G6 844 aa10.82□□□□□ -0.68
CD46-213ENST00000471987 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
CD46-213ENST00000471987 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
CD46-213ENST00000471987 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
CD46-213ENST00000471987 MYCP01106 439 aaPredicted RBP10.81□□□□□ -0.68
CD46-213ENST00000471987 ABL2P42684 1182 aa10.81□□□□□ -0.68
CD46-213ENST00000471987 CLN3Q13286 438 aa10.81□□□□□ -0.68
CD46-213ENST00000471987 WASHC4Q2M389 1173 aa10.81□□□□□ -0.68
CD46-213ENST00000471987 VAC14Q08AM6 782 aa10.8□□□□□ -0.68
CD46-213ENST00000471987 GPR161Q8N6U8 529 aaKnown RBP10.8□□□□□ -0.68
CD46-213ENST00000471987 CCDC85AQ96PX6 553 aaPredicted RBP10.8□□□□□ -0.68
CD46-213ENST00000471987 CDC14CA4D256 554 aa10.79□□□□□ -0.68
CD46-213ENST00000471987 SLFNL1Q499Z3 407 aa10.79□□□□□ -0.68
CD46-213ENST00000471987 SV2AQ7L0J3 742 aa10.79□□□□□ -0.68
CD46-213ENST00000471987 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
CD46-213ENST00000471987 GNRH1P01148 92 aa10.78□□□□□ -0.68
CD46-213ENST00000471987 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
CD46-213ENST00000471987 VWA5B2Q8N398 1253 aa10.78□□□□□ -0.68
CD46-213ENST00000471987 RHOQP17081 205 aa10.77□□□□□ -0.69
CD46-213ENST00000471987 RNF135Q8IUD6 432 aa10.77□□□□□ -0.69
CD46-213ENST00000471987 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
CD46-213ENST00000471987 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
CD46-213ENST00000471987 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
CD46-213ENST00000471987 DOLKQ9UPQ8 538 aa10.76□□□□□ -0.69
CD46-213ENST00000471987 SOX11P35716 441 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 KRT76Q01546 638 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 USP4Q13107 963 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
CD46-213ENST00000471987 ESYT1Q9BSJ8 1104 aa10.74□□□□□ -0.69
CD46-213ENST00000471987 RAB6BQ9NRW1 208 aa10.74□□□□□ -0.69
CD46-213ENST00000471987 POU4F2Q12837 409 aa10.73□□□□□ -0.69
CD46-213ENST00000471987 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
CD46-213ENST00000471987 TSGA10IPQ3SY00 556 aa10.73□□□□□ -0.69
CD46-213ENST00000471987 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
CD46-213ENST00000471987 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
CD46-213ENST00000471987 SPATA31C2B4DYI2 1134 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 WDR44Q5JSH3 913 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 GMCL1Q96IK5 515 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 COG6Q9Y2V7 657 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 DYRK1BQ9Y463 629 aa10.72□□□□□ -0.69
CD46-213ENST00000471987 IL2RAP01589 272 aa10.71□□□□□ -0.69
CD46-213ENST00000471987 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
CD46-213ENST00000471987 RNFT1Q5M7Z0 435 aa10.71□□□□□ -0.69
CD46-213ENST00000471987 NBPF10Q6P3W6 841 aaKnown RBP10.71□□□□□ -0.69
CD46-213ENST00000471987 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
CD46-213ENST00000471987 NBPF15Q8N660 670 aa10.71□□□□□ -0.69
CD46-213ENST00000471987 MAP7D1Q3KQU3 841 aa10.7□□□□□ -0.7
CD46-213ENST00000471987 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
CD46-213ENST00000471987 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
CD46-213ENST00000471987 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
CD46-213ENST00000471987 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
CD46-213ENST00000471987 CENPCQ03188 943 aa10.69□□□□□ -0.7
CD46-213ENST00000471987 FLIIQ13045 1269 aa10.69□□□□□ -0.7
CD46-213ENST00000471987 RIPOR1Q6ZS17 1223 aa10.69□□□□□ -0.7
CD46-213ENST00000471987 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
CD46-213ENST00000471987 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
CD46-213ENST00000471987 H7C1W4 665 aa10.68□□□□□ -0.7
CD46-213ENST00000471987 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
CD46-213ENST00000471987 GAS2L1Q99501 681 aaPredicted RBP10.68□□□□□ -0.7
CD46-213ENST00000471987 RAD21O60216 631 aa10.67□□□□□ -0.7
CD46-213ENST00000471987 GTF2E1P29083 439 aaPredicted RBP10.67□□□□□ -0.7
CD46-213ENST00000471987 FOXR1Q6PIV2 292 aa10.67□□□□□ -0.7
CD46-213ENST00000471987 PLPP7Q8NBV4 271 aa10.67□□□□□ -0.7
CD46-213ENST00000471987 ZNF837Q96EG3 531 aaPredicted RBP10.67□□□□□ -0.7
CD46-213ENST00000471987 TIMMDC1Q9NPL8 285 aa10.67□□□□□ -0.7
CD46-213ENST00000471987 HRH3Q9Y5N1 445 aa10.67□□□□□ -0.7
CD46-213ENST00000471987 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
CD46-213ENST00000471987 DBN1Q16643 649 aa10.65□□□□□ -0.7
CD46-213ENST00000471987 GNASQ5JWF2 1037 aa10.65□□□□□ -0.7
CD46-213ENST00000471987 FHDC1Q9C0D6 1143 aaPredicted RBP10.65□□□□□ -0.7
CD46-213ENST00000471987 ETNK1Q9HBU6 452 aa10.65□□□□□ -0.7
CD46-213ENST00000471987 F11P03951 625 aa10.64□□□□□ -0.71
CD46-213ENST00000471987 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
CD46-213ENST00000471987 POM121Q96HA1 1249 aa10.64□□□□□ -0.71
CD46-213ENST00000471987 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
CD46-213ENST00000471987 SRSF11Q05519 484 aaKnown RBP10.62□□□□□ -0.71
CD46-213ENST00000471987 GAS6Q14393 721 aa10.62□□□□□ -0.71
CD46-213ENST00000471987 SVOPQ8N4V2 548 aa10.62□□□□□ -0.71
CD46-213ENST00000471987 ALG2Q9H553 416 aa10.62□□□□□ -0.71
CD46-213ENST00000471987 A0A1B0GTH6 734 aa10.61□□□□□ -0.71
CD46-213ENST00000471987 TLR1Q15399 786 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms