RNA–Protein interactions for RNA: ENST00000471809.5

IFT27-208, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 6,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-208ENST00000471809 SSFA2P28290 1259 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 HIP1O00291 1037 aa13.8□□□□□ -0.2
IFT27-208ENST00000471809 CCDC158Q5M9N0 1113 aa13.8□□□□□ -0.2
IFT27-208ENST00000471809 BRD4O60885 1362 aaPredicted RBP13.8□□□□□ -0.2
IFT27-208ENST00000471809 IQCEQ6IPM2 695 aa13.8□□□□□ -0.2
IFT27-208ENST00000471809 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
IFT27-208ENST00000471809 TAF4BQ92750 862 aa13.8□□□□□ -0.2
IFT27-208ENST00000471809 ISM2Q6H9L7 571 aa13.79□□□□□ -0.2
IFT27-208ENST00000471809 CCDC85AQ96PX6 553 aaPredicted RBP13.79□□□□□ -0.2
IFT27-208ENST00000471809 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
IFT27-208ENST00000471809 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
IFT27-208ENST00000471809 LUC7LQ9NQ29 371 aaKnown RBP13.79□□□□□ -0.2
IFT27-208ENST00000471809 ZSWIM4Q9H7M6 989 aa13.79□□□□□ -0.2
IFT27-208ENST00000471809 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
IFT27-208ENST00000471809 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
IFT27-208ENST00000471809 LIG1P18858 919 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 KIF4BQ2VIQ3 1234 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
IFT27-208ENST00000471809 LMAN1P49257 510 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 FAM107BQ9H098 131 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 WWC2Q6AWC2 1192 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
IFT27-208ENST00000471809 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
IFT27-208ENST00000471809 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
IFT27-208ENST00000471809 SMTNL1A8MU46 457 aa13.77□□□□□ -0.2
IFT27-208ENST00000471809 PPFIA3O75145 1194 aa13.77□□□□□ -0.2
IFT27-208ENST00000471809 IFFO1Q0D2I5 559 aa13.77□□□□□ -0.21
IFT27-208ENST00000471809 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
IFT27-208ENST00000471809 USP5P45974 858 aa13.77□□□□□ -0.21
IFT27-208ENST00000471809 AAMPQ13685 434 aa13.76□□□□□ -0.21
IFT27-208ENST00000471809 KIF18AQ8NI77 898 aa13.76□□□□□ -0.21
IFT27-208ENST00000471809 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
IFT27-208ENST00000471809 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
IFT27-208ENST00000471809 CCDC97Q96F63 343 aaPredicted RBP13.76□□□□□ -0.21
IFT27-208ENST00000471809 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
IFT27-208ENST00000471809 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 KIF5CO60282 957 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 BIN1O00499 593 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 NLRP6P59044 892 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
IFT27-208ENST00000471809 CEP63Q96MT8 703 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
IFT27-208ENST00000471809 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 WIZO95785 1651 aa13.75□□□□□ -0.21
IFT27-208ENST00000471809 SOGA3Q5TF21 947 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.74□□□□□ -0.21
IFT27-208ENST00000471809 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 HDGFL1Q5TGJ6 251 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 PRPF40BQ6NWY9 871 aaKnown RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 IGSF3O75054 1194 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 ADCY5O95622 1261 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
IFT27-208ENST00000471809 SPA17Q15506 151 aa13.74□□□□□ -0.21
IFT27-208ENST00000471809 TDO2P48775 406 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 LUZP1Q86V48 1076 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 ZNF397Q8NF99 534 aaPredicted RBP13.73□□□□□ -0.21
IFT27-208ENST00000471809 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
IFT27-208ENST00000471809 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 NEBLO76041 1014 aa13.73□□□□□ -0.21
IFT27-208ENST00000471809 RBM5P52756 815 aaKnown RBP eCLIP13.73□□□□□ -0.21
IFT27-208ENST00000471809 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 MACROD2A1Z1Q3 448 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 CCDC91Q7Z6B0 441 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 TXLNBQ8N3L3 684 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 UBA5Q9GZZ9 404 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 TTC16Q8NEE8 873 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
IFT27-208ENST00000471809 GTF2A1P52655 376 aaPredicted RBP13.71□□□□□ -0.21
IFT27-208ENST00000471809 ZSCAN12O43309 604 aa13.71□□□□□ -0.21
IFT27-208ENST00000471809 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
IFT27-208ENST00000471809 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
IFT27-208ENST00000471809 ZNF76P36508 570 aa13.71□□□□□ -0.22
IFT27-208ENST00000471809 MAATS1Q7Z4T9 603 aa13.71□□□□□ -0.22
IFT27-208ENST00000471809 TERF1P54274 439 aa13.71□□□□□ -0.22
IFT27-208ENST00000471809 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.22
IFT27-208ENST00000471809 STRN4Q9NRL3 753 aa13.71□□□□□ -0.22
IFT27-208ENST00000471809 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
IFT27-208ENST00000471809 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
IFT27-208ENST00000471809 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
IFT27-208ENST00000471809 MNAT1P51948 309 aa13.7□□□□□ -0.22
IFT27-208ENST00000471809 UBE2Q2Q8WVN8 375 aa13.7□□□□□ -0.22
IFT27-208ENST00000471809 SMARCC1Q92922 1105 aaPredicted RBP13.7□□□□□ -0.22
IFT27-208ENST00000471809 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
IFT27-208ENST00000471809 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms