RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 TATP17735 454 aaPredicted RBP25■■□□□ 1.59
SNX4-203ENST00000471751 TMPOP42166 694 aaKnown RBP25■■□□□ 1.59
SNX4-203ENST00000471751 NFE2L2Q16236 605 aa25■■□□□ 1.59
SNX4-203ENST00000471751 CCDC146Q8IYE0 955 aa25■■□□□ 1.59
SNX4-203ENST00000471751 TRPC5Q9UL62 973 aaPredicted RBP25■■□□□ 1.59
SNX4-203ENST00000471751 HTATSF1O43719 755 aaKnown RBP24.99■■□□□ 1.59
SNX4-203ENST00000471751 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
SNX4-203ENST00000471751 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
SNX4-203ENST00000471751 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
SNX4-203ENST00000471751 BARGINQ6ZT62 677 aa24.98■■□□□ 1.59
SNX4-203ENST00000471751 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
SNX4-203ENST00000471751 SPATA31A1Q5TZJ5 1347 aa24.97■■□□□ 1.59
SNX4-203ENST00000471751 IL2RBP14784 551 aa24.97■■□□□ 1.59
SNX4-203ENST00000471751 PDE3BQ13370 1112 aa24.96■■□□□ 1.59
SNX4-203ENST00000471751 USHBP1Q8N6Y0 703 aa24.96■■□□□ 1.59
SNX4-203ENST00000471751 SPG7Q9UQ90 795 aa24.96■■□□□ 1.59
SNX4-203ENST00000471751 PARP4Q9UKK3 1724 aaKnown RBP24.94■■□□□ 1.58
SNX4-203ENST00000471751 RIPK4P57078 832 aa24.93■■□□□ 1.58
SNX4-203ENST00000471751 OVOS2A0A0G2JMS6 1433 aa24.93■■□□□ 1.58
SNX4-203ENST00000471751 RGS12O14924 1447 aa24.93■■□□□ 1.58
SNX4-203ENST00000471751 CALD1Q05682 793 aaKnown RBP24.92■■□□□ 1.58
SNX4-203ENST00000471751 MTHFSDQ2M296 383 aaKnown RBP24.92■■□□□ 1.58
SNX4-203ENST00000471751 WDR63Q8IWG1 891 aa24.92■■□□□ 1.58
SNX4-203ENST00000471751 UPF1Q92900 1129 aaKnown RBP eCLIP24.92■■□□□ 1.58
SNX4-203ENST00000471751 ZNF521Q96K83 1311 aa24.91■■□□□ 1.58
SNX4-203ENST00000471751 DISP2A7MBM2 1401 aa24.91■■□□□ 1.58
SNX4-203ENST00000471751 AKAP4Q5JQC9 854 aa24.9■■□□□ 1.58
SNX4-203ENST00000471751 WWC1Q8IX03 1113 aa24.9■■□□□ 1.58
SNX4-203ENST00000471751 ATRNO75882 1429 aa24.9■■□□□ 1.58
SNX4-203ENST00000471751 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.58
SNX4-203ENST00000471751 GNAT3A8MTJ3 354 aa24.88■■□□□ 1.57
SNX4-203ENST00000471751 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
SNX4-203ENST00000471751 ZCRB1Q8TBF4 217 aaKnown RBP24.88■■□□□ 1.57
SNX4-203ENST00000471751 MEGF6O75095 1541 aa24.88■■□□□ 1.57
SNX4-203ENST00000471751 IL16Q14005 1332 aa24.88■■□□□ 1.57
SNX4-203ENST00000471751 DLG5Q8TDM6 1919 aa24.88■■□□□ 1.57
SNX4-203ENST00000471751 RTF1Q92541 710 aaKnown RBP24.87■■□□□ 1.57
SNX4-203ENST00000471751 GJD4Q96KN9 370 aaPredicted RBP24.87■■□□□ 1.57
SNX4-203ENST00000471751 YTHDC1Q96MU7 727 aaKnown RBP24.87■■□□□ 1.57
SNX4-203ENST00000471751 CCDC9Q9Y3X0 531 aaKnown RBP24.87■■□□□ 1.57
SNX4-203ENST00000471751 ONECUT3O60422 494 aaPredicted RBP24.86■■□□□ 1.57
SNX4-203ENST00000471751 C1orf141Q5JVX7 400 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 IFNL2Q8IZJ0 200 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 TRIM35Q9UPQ4 493 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 WNK3Q9BYP7 1800 aa24.86■■□□□ 1.57
SNX4-203ENST00000471751 MAP3K5Q99683 1374 aa24.85■■□□□ 1.57
SNX4-203ENST00000471751 EXOC5O00471 708 aa24.85■■□□□ 1.57
SNX4-203ENST00000471751 GOLGA2Q08379 1002 aa24.85■■□□□ 1.57
SNX4-203ENST00000471751 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
SNX4-203ENST00000471751 ZNF530Q6P9A1 599 aaPredicted RBP24.85■■□□□ 1.57
SNX4-203ENST00000471751 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
SNX4-203ENST00000471751 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.56
SNX4-203ENST00000471751 BABAM1Q9NWV8 329 aa24.83■■□□□ 1.56
SNX4-203ENST00000471751 RRP7AQ9Y3A4 280 aaKnown RBP24.83■■□□□ 1.56
SNX4-203ENST00000471751 PHKG2P15735 406 aa24.81■■□□□ 1.56
SNX4-203ENST00000471751 E9PSI1 815 aa24.8■■□□□ 1.56
SNX4-203ENST00000471751 DCAF5Q96JK2 942 aa24.8■■□□□ 1.56
SNX4-203ENST00000471751 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
SNX4-203ENST00000471751 DDB1Q16531 1140 aa24.79■■□□□ 1.56
SNX4-203ENST00000471751 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
SNX4-203ENST00000471751 ADAMTS7Q9UKP4 1686 aa24.78■■□□□ 1.56
SNX4-203ENST00000471751 CYP27B1O15528 508 aa24.78■■□□□ 1.56
SNX4-203ENST00000471751 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
SNX4-203ENST00000471751 TRMT2AQ8IZ69 625 aaKnown RBP24.77■■□□□ 1.56
SNX4-203ENST00000471751 GNAI1P63096 354 aa24.76■■□□□ 1.55
SNX4-203ENST00000471751 MYH16Q9H6N6 1097 aa24.76■■□□□ 1.55
SNX4-203ENST00000471751 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
SNX4-203ENST00000471751 GLI3P10071 1580 aa24.76■■□□□ 1.55
SNX4-203ENST00000471751 A0A0G2JS52 829 aa24.75■■□□□ 1.55
SNX4-203ENST00000471751 CENPBP07199 599 aaPredicted RBP24.75■■□□□ 1.55
SNX4-203ENST00000471751 MYT1Q01538 1121 aa24.75■■□□□ 1.55
SNX4-203ENST00000471751 SLFN5Q08AF3 891 aa24.75■■□□□ 1.55
SNX4-203ENST00000471751 IL17REQ8NFR9 667 aa24.75■■□□□ 1.55
SNX4-203ENST00000471751 CFAP44Q96MT7 982 aa24.75■■□□□ 1.55
SNX4-203ENST00000471751 ERVV-2B6SEH9 535 aa24.74■■□□□ 1.55
SNX4-203ENST00000471751 RNMTO43148 476 aaKnown RBP24.74■■□□□ 1.55
SNX4-203ENST00000471751 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
SNX4-203ENST00000471751 SEPT12Q8IYM1 358 aa24.74■■□□□ 1.55
SNX4-203ENST00000471751 SHANK3Q9BYB0 1731 aa24.74■■□□□ 1.55
SNX4-203ENST00000471751 THSD7AQ9UPZ6 1657 aa24.74■■□□□ 1.55
SNX4-203ENST00000471751 ZNF853P0CG23 659 aa24.73■■□□□ 1.55
SNX4-203ENST00000471751 SCN11AQ9UI33 1791 aa24.72■■□□□ 1.55
SNX4-203ENST00000471751 TAF7Q15545 349 aaPredicted RBP24.71■■□□□ 1.55
SNX4-203ENST00000471751 LRRC37A3O60309 1634 aa24.7■■□□□ 1.55
SNX4-203ENST00000471751 BCL9O00512 1426 aa24.7■■□□□ 1.54
SNX4-203ENST00000471751 CHL1O00533 1208 aa24.7■■□□□ 1.54
SNX4-203ENST00000471751 MCM10Q7L590 875 aa24.7■■□□□ 1.54
SNX4-203ENST00000471751 VIRMAQ69YN4 1812 aaKnown RBP24.7■■□□□ 1.54
SNX4-203ENST00000471751 TEFQ10587 303 aa24.69■■□□□ 1.54
SNX4-203ENST00000471751 MPRIPQ6WCQ1 1025 aa24.69■■□□□ 1.54
SNX4-203ENST00000471751 DDX54Q8TDD1 881 aaKnown RBP24.69■■□□□ 1.54
SNX4-203ENST00000471751 CT47B1P0C2W7 299 aaPredicted RBP24.67■■□□□ 1.54
SNX4-203ENST00000471751 DCTN1Q14203 1278 aa24.67■■□□□ 1.54
SNX4-203ENST00000471751 DUSP27Q5VZP5 1158 aa24.67■■□□□ 1.54
SNX4-203ENST00000471751 LGR6Q9HBX8 967 aa24.67■■□□□ 1.54
SNX4-203ENST00000471751 MRC1P22897 1456 aa24.67■■□□□ 1.54
SNX4-203ENST00000471751 SLC52A2Q9HAB3 445 aa24.66■■□□□ 1.54
SNX4-203ENST00000471751 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms