RNA–Protein interactions for RNA: ENST00000471739.1

FYCO1-204, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 4

Gene FYCO1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-204ENST00000471739 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
FYCO1-204ENST00000471739 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
FYCO1-204ENST00000471739 INSRP06213 1382 aa17.01■□□□□ 0.31
FYCO1-204ENST00000471739 FLT4P35916 1363 aa17.01■□□□□ 0.31
FYCO1-204ENST00000471739 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
FYCO1-204ENST00000471739 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
FYCO1-204ENST00000471739 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
FYCO1-204ENST00000471739 MYOM1P52179 1685 aa17■□□□□ 0.31
FYCO1-204ENST00000471739 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
FYCO1-204ENST00000471739 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
FYCO1-204ENST00000471739 YY1P25490 414 aa16.99■□□□□ 0.31
FYCO1-204ENST00000471739 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
FYCO1-204ENST00000471739 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
FYCO1-204ENST00000471739 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
FYCO1-204ENST00000471739 AKT1S1Q96B36 256 aa16.98■□□□□ 0.31
FYCO1-204ENST00000471739 NSD2O96028 1365 aa16.98■□□□□ 0.31
FYCO1-204ENST00000471739 SHANK3Q9BYB0 1731 aa16.97■□□□□ 0.31
FYCO1-204ENST00000471739 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
FYCO1-204ENST00000471739 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
FYCO1-204ENST00000471739 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
FYCO1-204ENST00000471739 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
FYCO1-204ENST00000471739 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.3
FYCO1-204ENST00000471739 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.3
FYCO1-204ENST00000471739 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
FYCO1-204ENST00000471739 ARXQ96QS3 562 aa16.95■□□□□ 0.3
FYCO1-204ENST00000471739 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
FYCO1-204ENST00000471739 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
FYCO1-204ENST00000471739 UTRNP46939 3433 aa16.94■□□□□ 0.3
FYCO1-204ENST00000471739 KCNQ4P56696 695 aa16.94■□□□□ 0.3
FYCO1-204ENST00000471739 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
FYCO1-204ENST00000471739 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
FYCO1-204ENST00000471739 CCNL1Q9UK58 526 aaPredicted RBP16.93■□□□□ 0.3
FYCO1-204ENST00000471739 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
FYCO1-204ENST00000471739 LY75O60449 1722 aa16.91■□□□□ 0.3
FYCO1-204ENST00000471739 QSER1Q2KHR3 1735 aa16.91■□□□□ 0.3
FYCO1-204ENST00000471739 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
FYCO1-204ENST00000471739 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
FYCO1-204ENST00000471739 CYP27B1O15528 508 aa16.9■□□□□ 0.3
FYCO1-204ENST00000471739 POLD1P28340 1107 aa16.9■□□□□ 0.3
FYCO1-204ENST00000471739 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
FYCO1-204ENST00000471739 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.29
FYCO1-204ENST00000471739 ANKRD26Q9UPS8 1709 aa16.88■□□□□ 0.29
FYCO1-204ENST00000471739 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
FYCO1-204ENST00000471739 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
FYCO1-204ENST00000471739 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
FYCO1-204ENST00000471739 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
FYCO1-204ENST00000471739 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
FYCO1-204ENST00000471739 EYA1Q99502 592 aa16.86■□□□□ 0.29
FYCO1-204ENST00000471739 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
FYCO1-204ENST00000471739 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
FYCO1-204ENST00000471739 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
FYCO1-204ENST00000471739 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
FYCO1-204ENST00000471739 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
FYCO1-204ENST00000471739 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
FYCO1-204ENST00000471739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
FYCO1-204ENST00000471739 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
FYCO1-204ENST00000471739 MSH5O43196 834 aa16.84■□□□□ 0.29
FYCO1-204ENST00000471739 COL24A1Q17RW2 1714 aa16.84■□□□□ 0.29
FYCO1-204ENST00000471739 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
FYCO1-204ENST00000471739 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
FYCO1-204ENST00000471739 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
FYCO1-204ENST00000471739 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
FYCO1-204ENST00000471739 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
FYCO1-204ENST00000471739 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
FYCO1-204ENST00000471739 PIGBQ92521 554 aa16.82■□□□□ 0.28
FYCO1-204ENST00000471739 PANK3Q9H999 370 aa16.82■□□□□ 0.28
FYCO1-204ENST00000471739 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
FYCO1-204ENST00000471739 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
FYCO1-204ENST00000471739 EIF4A2Q14240 407 aaKnown RBP16.81■□□□□ 0.28
FYCO1-204ENST00000471739 GPR162Q16538 588 aa16.81■□□□□ 0.28
FYCO1-204ENST00000471739 C5P01031 1676 aa16.81■□□□□ 0.28
FYCO1-204ENST00000471739 PHKG2P15735 406 aa16.79■□□□□ 0.28
FYCO1-204ENST00000471739 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
FYCO1-204ENST00000471739 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
FYCO1-204ENST00000471739 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
FYCO1-204ENST00000471739 ITGB4P16144 1822 aa16.79■□□□□ 0.28
FYCO1-204ENST00000471739 IGSF1Q8N6C5 1336 aa16.78■□□□□ 0.28
FYCO1-204ENST00000471739 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
FYCO1-204ENST00000471739 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
FYCO1-204ENST00000471739 AK7Q96M32 723 aa16.78■□□□□ 0.28
FYCO1-204ENST00000471739 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
FYCO1-204ENST00000471739 SIK1P57059 783 aa16.77■□□□□ 0.28
FYCO1-204ENST00000471739 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.27
FYCO1-204ENST00000471739 C4BP0C0L5 1744 aa16.76■□□□□ 0.27
FYCO1-204ENST00000471739 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
FYCO1-204ENST00000471739 CHD4Q14839 1912 aa16.76■□□□□ 0.27
FYCO1-204ENST00000471739 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
FYCO1-204ENST00000471739 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
FYCO1-204ENST00000471739 AMIGO3Q86WK7 504 aa16.74■□□□□ 0.27
FYCO1-204ENST00000471739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
FYCO1-204ENST00000471739 PHF14O94880 888 aa16.73■□□□□ 0.27
FYCO1-204ENST00000471739 SSFA2P28290 1259 aa16.73■□□□□ 0.27
FYCO1-204ENST00000471739 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
FYCO1-204ENST00000471739 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
FYCO1-204ENST00000471739 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
FYCO1-204ENST00000471739 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
FYCO1-204ENST00000471739 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
FYCO1-204ENST00000471739 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
FYCO1-204ENST00000471739 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
FYCO1-204ENST00000471739 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms