RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
COMMD6-208ENST00000471682 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
COMMD6-208ENST00000471682 ZCRB1Q8TBF4 217 aaKnown RBP20.39■□□□□ 0.85
COMMD6-208ENST00000471682 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
COMMD6-208ENST00000471682 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
COMMD6-208ENST00000471682 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
COMMD6-208ENST00000471682 PNNQ9H307 717 aaKnown RBP20.37■□□□□ 0.85
COMMD6-208ENST00000471682 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
COMMD6-208ENST00000471682 BRWD3Q6RI45 1802 aa20.37■□□□□ 0.85
COMMD6-208ENST00000471682 BCL9O00512 1426 aa20.36■□□□□ 0.85
COMMD6-208ENST00000471682 PKD1L3Q7Z443 1732 aa20.36■□□□□ 0.85
COMMD6-208ENST00000471682 HMOX1P09601 288 aa20.36■□□□□ 0.85
COMMD6-208ENST00000471682 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
COMMD6-208ENST00000471682 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
COMMD6-208ENST00000471682 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
COMMD6-208ENST00000471682 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
COMMD6-208ENST00000471682 CCER2I3L3R5 266 aa20.35■□□□□ 0.85
COMMD6-208ENST00000471682 WDR43Q15061 677 aaKnown RBP eCLIP20.34■□□□□ 0.85
COMMD6-208ENST00000471682 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
COMMD6-208ENST00000471682 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.85
COMMD6-208ENST00000471682 ILDR2Q71H61 639 aa20.33■□□□□ 0.85
COMMD6-208ENST00000471682 MARCH10Q8NA82 808 aaPredicted RBP20.33■□□□□ 0.85
COMMD6-208ENST00000471682 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
COMMD6-208ENST00000471682 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
COMMD6-208ENST00000471682 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
COMMD6-208ENST00000471682 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
COMMD6-208ENST00000471682 NEFMP07197 916 aa20.3■□□□□ 0.84
COMMD6-208ENST00000471682 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
COMMD6-208ENST00000471682 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
COMMD6-208ENST00000471682 CYP27B1O15528 508 aa20.29■□□□□ 0.84
COMMD6-208ENST00000471682 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
COMMD6-208ENST00000471682 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
COMMD6-208ENST00000471682 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
COMMD6-208ENST00000471682 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
COMMD6-208ENST00000471682 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
COMMD6-208ENST00000471682 PHKG2P15735 406 aa20.27■□□□□ 0.84
COMMD6-208ENST00000471682 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
COMMD6-208ENST00000471682 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
COMMD6-208ENST00000471682 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
COMMD6-208ENST00000471682 ZNF530Q6P9A1 599 aaPredicted RBP20.26■□□□□ 0.83
COMMD6-208ENST00000471682 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
COMMD6-208ENST00000471682 CCDC125Q86Z20 511 aa20.24■□□□□ 0.83
COMMD6-208ENST00000471682 MIER1Q8N108 512 aa20.24■□□□□ 0.83
COMMD6-208ENST00000471682 RUNDC1Q96C34 613 aa20.24■□□□□ 0.83
COMMD6-208ENST00000471682 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
COMMD6-208ENST00000471682 MAPK8IP3Q9UPT6 1336 aa20.24■□□□□ 0.83
COMMD6-208ENST00000471682 FAM182BQ5T319 152 aa20.22■□□□□ 0.83
COMMD6-208ENST00000471682 HTATSF1O43719 755 aaKnown RBP20.21■□□□□ 0.83
COMMD6-208ENST00000471682 GNAT3A8MTJ3 354 aa20.2■□□□□ 0.82
COMMD6-208ENST00000471682 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
COMMD6-208ENST00000471682 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
COMMD6-208ENST00000471682 MAP3K5Q99683 1374 aa20.2■□□□□ 0.82
COMMD6-208ENST00000471682 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
COMMD6-208ENST00000471682 NFE2L2Q16236 605 aa20.19■□□□□ 0.82
COMMD6-208ENST00000471682 NHSQ6T4R5 1651 aa20.18■□□□□ 0.82
COMMD6-208ENST00000471682 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
COMMD6-208ENST00000471682 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
COMMD6-208ENST00000471682 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
COMMD6-208ENST00000471682 TRIM37O94972 964 aa20.16■□□□□ 0.82
COMMD6-208ENST00000471682 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
COMMD6-208ENST00000471682 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
COMMD6-208ENST00000471682 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.82
COMMD6-208ENST00000471682 EP400Q96L91 3159 aa20.15■□□□□ 0.82
COMMD6-208ENST00000471682 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
COMMD6-208ENST00000471682 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
COMMD6-208ENST00000471682 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
COMMD6-208ENST00000471682 DOT1LQ8TEK3 1739 aa20.15■□□□□ 0.82
COMMD6-208ENST00000471682 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 SF3B2Q13435 895 aaKnown RBP20.14■□□□□ 0.81
COMMD6-208ENST00000471682 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
COMMD6-208ENST00000471682 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 KAT6BQ8WYB5 2073 aa20.14■□□□□ 0.81
COMMD6-208ENST00000471682 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
COMMD6-208ENST00000471682 KCNQ2O43526 872 aa20.13■□□□□ 0.81
COMMD6-208ENST00000471682 MRC1P22897 1456 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 RIPK4P57078 832 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 CABP4P57796 275 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
COMMD6-208ENST00000471682 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
COMMD6-208ENST00000471682 SOCS7O14512 581 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 APAF1O14727 1248 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 PLSCR1O15162 318 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
COMMD6-208ENST00000471682 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 ITGB4P16144 1822 aa20.11■□□□□ 0.81
COMMD6-208ENST00000471682 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
COMMD6-208ENST00000471682 BAG6P46379 1132 aa20.09■□□□□ 0.81
COMMD6-208ENST00000471682 PIGBQ92521 554 aa20.09■□□□□ 0.81
COMMD6-208ENST00000471682 APBA3O96018 575 aa20.08■□□□□ 0.81
COMMD6-208ENST00000471682 TEFQ10587 303 aa20.08■□□□□ 0.81
COMMD6-208ENST00000471682 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
COMMD6-208ENST00000471682 PTF1AQ7RTS3 328 aa20.08■□□□□ 0.81
COMMD6-208ENST00000471682 NFATC2IPQ8NCF5 419 aa20.08■□□□□ 0.81
COMMD6-208ENST00000471682 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms