RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 KCNQ2O43526 872 aa13.06□□□□□ -0.32
CPSF4-211ENST00000471455 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-211ENST00000471455 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
CPSF4-211ENST00000471455 BCL9O00512 1426 aa13.05□□□□□ -0.32
CPSF4-211ENST00000471455 ABCC6O95255 1503 aa13.05□□□□□ -0.32
CPSF4-211ENST00000471455 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
CPSF4-211ENST00000471455 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
CPSF4-211ENST00000471455 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
CPSF4-211ENST00000471455 YY1P25490 414 aa13.04□□□□□ -0.32
CPSF4-211ENST00000471455 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-211ENST00000471455 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
CPSF4-211ENST00000471455 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
CPSF4-211ENST00000471455 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
CPSF4-211ENST00000471455 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CPSF4-211ENST00000471455 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
CPSF4-211ENST00000471455 COL18A1P39060 1754 aa13.02□□□□□ -0.32
CPSF4-211ENST00000471455 SBF2Q86WG5 1849 aa13.02□□□□□ -0.32
CPSF4-211ENST00000471455 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
CPSF4-211ENST00000471455 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
CPSF4-211ENST00000471455 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
CPSF4-211ENST00000471455 TNS2Q63HR2 1409 aa13□□□□□ -0.33
CPSF4-211ENST00000471455 EXOC5O00471 708 aa13□□□□□ -0.33
CPSF4-211ENST00000471455 STK32BQ9NY57 414 aa13□□□□□ -0.33
CPSF4-211ENST00000471455 SOX12O15370 315 aa12.99□□□□□ -0.33
CPSF4-211ENST00000471455 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-211ENST00000471455 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-211ENST00000471455 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
CPSF4-211ENST00000471455 NFAT5O94916 1531 aa12.98□□□□□ -0.33
CPSF4-211ENST00000471455 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
CPSF4-211ENST00000471455 ANO8Q9HCE9 1232 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-211ENST00000471455 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
CPSF4-211ENST00000471455 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
CPSF4-211ENST00000471455 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
CPSF4-211ENST00000471455 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
CPSF4-211ENST00000471455 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
CPSF4-211ENST00000471455 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
CPSF4-211ENST00000471455 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-211ENST00000471455 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
CPSF4-211ENST00000471455 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
CPSF4-211ENST00000471455 ERBB3P21860 1342 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
CPSF4-211ENST00000471455 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
CPSF4-211ENST00000471455 IL2RBP14784 551 aa12.93□□□□□ -0.34
CPSF4-211ENST00000471455 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
CPSF4-211ENST00000471455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
CPSF4-211ENST00000471455 MYOM1P52179 1685 aa12.93□□□□□ -0.34
CPSF4-211ENST00000471455 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
CPSF4-211ENST00000471455 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
CPSF4-211ENST00000471455 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
CPSF4-211ENST00000471455 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
CPSF4-211ENST00000471455 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
CPSF4-211ENST00000471455 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
CPSF4-211ENST00000471455 PSEN1P49768 467 aa12.91□□□□□ -0.34
CPSF4-211ENST00000471455 LTN1O94822 1766 aa12.91□□□□□ -0.34
CPSF4-211ENST00000471455 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
CPSF4-211ENST00000471455 PTGER2P43116 358 aa12.9□□□□□ -0.34
CPSF4-211ENST00000471455 NME9Q86XW9 330 aa12.9□□□□□ -0.34
CPSF4-211ENST00000471455 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
CPSF4-211ENST00000471455 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
CPSF4-211ENST00000471455 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
CPSF4-211ENST00000471455 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
CPSF4-211ENST00000471455 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
CPSF4-211ENST00000471455 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
CPSF4-211ENST00000471455 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
CPSF4-211ENST00000471455 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-211ENST00000471455 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
CPSF4-211ENST00000471455 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-211ENST00000471455 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
CPSF4-211ENST00000471455 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
CPSF4-211ENST00000471455 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-211ENST00000471455 C7P10643 843 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 ARXQ96QS3 562 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 BTAF1O14981 1849 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
CPSF4-211ENST00000471455 RGL2O15211 777 aa12.86□□□□□ -0.35
CPSF4-211ENST00000471455 POLD1P28340 1107 aa12.85□□□□□ -0.35
CPSF4-211ENST00000471455 LHX8Q68G74 356 aa12.85□□□□□ -0.35
CPSF4-211ENST00000471455 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
CPSF4-211ENST00000471455 IP6K1Q92551 441 aa12.85□□□□□ -0.35
CPSF4-211ENST00000471455 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
CPSF4-211ENST00000471455 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-211ENST00000471455 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
CPSF4-211ENST00000471455 COG3Q96JB2 828 aa12.84□□□□□ -0.35
CPSF4-211ENST00000471455 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
CPSF4-211ENST00000471455 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-211ENST00000471455 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
CPSF4-211ENST00000471455 CHD4Q14839 1912 aa12.83□□□□□ -0.36
CPSF4-211ENST00000471455 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
CPSF4-211ENST00000471455 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
CPSF4-211ENST00000471455 AMPHP49418 695 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms