RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
POLR1A-206ENST00000471427 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
POLR1A-206ENST00000471427 SLC27A3Q5K4L6 730 aa13.19□□□□□ -0.3
POLR1A-206ENST00000471427 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
POLR1A-206ENST00000471427 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
POLR1A-206ENST00000471427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
POLR1A-206ENST00000471427 MEGF6O75095 1541 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 PPM1GO15355 546 aaPredicted RBP13.18□□□□□ -0.3
POLR1A-206ENST00000471427 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 EYA1Q99502 592 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 NHSQ6T4R5 1651 aa13.18□□□□□ -0.3
POLR1A-206ENST00000471427 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
POLR1A-206ENST00000471427 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
POLR1A-206ENST00000471427 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
POLR1A-206ENST00000471427 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
POLR1A-206ENST00000471427 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
POLR1A-206ENST00000471427 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
POLR1A-206ENST00000471427 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.3
POLR1A-206ENST00000471427 CYP27B1O15528 508 aa13.15□□□□□ -0.3
POLR1A-206ENST00000471427 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
POLR1A-206ENST00000471427 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
POLR1A-206ENST00000471427 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
POLR1A-206ENST00000471427 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
POLR1A-206ENST00000471427 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
POLR1A-206ENST00000471427 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
POLR1A-206ENST00000471427 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
POLR1A-206ENST00000471427 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
POLR1A-206ENST00000471427 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
POLR1A-206ENST00000471427 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
POLR1A-206ENST00000471427 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
POLR1A-206ENST00000471427 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
POLR1A-206ENST00000471427 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
POLR1A-206ENST00000471427 BTAF1O14981 1849 aa13.12□□□□□ -0.31
POLR1A-206ENST00000471427 MTFR1LQ9H019 292 aa13.12□□□□□ -0.31
POLR1A-206ENST00000471427 PTGER2P43116 358 aa13.11□□□□□ -0.31
POLR1A-206ENST00000471427 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
POLR1A-206ENST00000471427 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
POLR1A-206ENST00000471427 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
POLR1A-206ENST00000471427 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
POLR1A-206ENST00000471427 ZBTB7AO95365 584 aa13.1□□□□□ -0.31
POLR1A-206ENST00000471427 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
POLR1A-206ENST00000471427 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
POLR1A-206ENST00000471427 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
POLR1A-206ENST00000471427 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
POLR1A-206ENST00000471427 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
POLR1A-206ENST00000471427 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
POLR1A-206ENST00000471427 PHKG2P15735 406 aa13.08□□□□□ -0.32
POLR1A-206ENST00000471427 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
POLR1A-206ENST00000471427 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
POLR1A-206ENST00000471427 PIGBQ92521 554 aa13.08□□□□□ -0.32
POLR1A-206ENST00000471427 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
POLR1A-206ENST00000471427 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
POLR1A-206ENST00000471427 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
POLR1A-206ENST00000471427 IL13P35225 146 aa13.07□□□□□ -0.32
POLR1A-206ENST00000471427 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
POLR1A-206ENST00000471427 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
POLR1A-206ENST00000471427 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
POLR1A-206ENST00000471427 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
POLR1A-206ENST00000471427 KCNQ4P56696 695 aa13.06□□□□□ -0.32
POLR1A-206ENST00000471427 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 MTHFSP49914 203 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 KDRP35968 1356 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 LY75O60449 1722 aa13.05□□□□□ -0.32
POLR1A-206ENST00000471427 FLAD1Q8NFF5 587 aa13.04□□□□□ -0.32
POLR1A-206ENST00000471427 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
POLR1A-206ENST00000471427 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
POLR1A-206ENST00000471427 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
POLR1A-206ENST00000471427 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
POLR1A-206ENST00000471427 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
POLR1A-206ENST00000471427 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
POLR1A-206ENST00000471427 SIK1P57059 783 aa13.02□□□□□ -0.33
POLR1A-206ENST00000471427 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
POLR1A-206ENST00000471427 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
POLR1A-206ENST00000471427 ARXQ96QS3 562 aa13.02□□□□□ -0.33
POLR1A-206ENST00000471427 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
POLR1A-206ENST00000471427 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
POLR1A-206ENST00000471427 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
POLR1A-206ENST00000471427 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
POLR1A-206ENST00000471427 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
POLR1A-206ENST00000471427 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
POLR1A-206ENST00000471427 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
POLR1A-206ENST00000471427 POLD1P28340 1107 aa13□□□□□ -0.33
POLR1A-206ENST00000471427 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
POLR1A-206ENST00000471427 ITGB4P16144 1822 aa12.99□□□□□ -0.33
POLR1A-206ENST00000471427 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
POLR1A-206ENST00000471427 UTRNP46939 3433 aa12.98□□□□□ -0.33
POLR1A-206ENST00000471427 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
POLR1A-206ENST00000471427 CABP4P57796 275 aa12.98□□□□□ -0.33
POLR1A-206ENST00000471427 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
POLR1A-206ENST00000471427 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
POLR1A-206ENST00000471427 SSFA2P28290 1259 aa12.97□□□□□ -0.33
POLR1A-206ENST00000471427 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
POLR1A-206ENST00000471427 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
POLR1A-206ENST00000471427 COL24A1Q17RW2 1714 aa12.96□□□□□ -0.33
POLR1A-206ENST00000471427 ITPK1Q13572 414 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms