RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
TRIM59-204ENST00000471396 TNS2Q63HR2 1409 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 SMG6Q86US8 1419 aaKnown RBP10.51□□□□□ -0.73
TRIM59-204ENST00000471396 RGPD1P0DJD0 1748 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
TRIM59-204ENST00000471396 KNSTRNQ9Y448 316 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 INSRP06213 1382 aa10.51□□□□□ -0.73
TRIM59-204ENST00000471396 MAP2P11137 1827 aaKnown RBP10.5□□□□□ -0.73
TRIM59-204ENST00000471396 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM59-204ENST00000471396 DDB1Q16531 1140 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 FAM182BQ5T319 152 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 MIER1Q8N108 512 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 OVOS2A0A0G2JMS6 1433 aa10.5□□□□□ -0.73
TRIM59-204ENST00000471396 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
TRIM59-204ENST00000471396 FAM196AQ6ZSG2 479 aa10.49□□□□□ -0.73
TRIM59-204ENST00000471396 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
TRIM59-204ENST00000471396 TNS1Q9HBL0 1735 aaKnown RBP10.49□□□□□ -0.73
TRIM59-204ENST00000471396 IL2RBP14784 551 aa10.48□□□□□ -0.73
TRIM59-204ENST00000471396 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
TRIM59-204ENST00000471396 HSP90AB2PQ58FF8 381 aa10.48□□□□□ -0.73
TRIM59-204ENST00000471396 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
TRIM59-204ENST00000471396 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
TRIM59-204ENST00000471396 MORC1Q86VD1 984 aa10.47□□□□□ -0.73
TRIM59-204ENST00000471396 POLKQ9UBT6 870 aa10.47□□□□□ -0.73
TRIM59-204ENST00000471396 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
TRIM59-204ENST00000471396 BCL9O00512 1426 aa10.47□□□□□ -0.73
TRIM59-204ENST00000471396 EXOC5O00471 708 aa10.46□□□□□ -0.73
TRIM59-204ENST00000471396 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.73
TRIM59-204ENST00000471396 PER1O15534 1290 aaPredicted RBP10.46□□□□□ -0.73
TRIM59-204ENST00000471396 NPC1L1Q9UHC9 1359 aa10.46□□□□□ -0.74
TRIM59-204ENST00000471396 NCAPD2Q15021 1401 aa10.46□□□□□ -0.74
TRIM59-204ENST00000471396 MEGF6O75095 1541 aa10.46□□□□□ -0.74
TRIM59-204ENST00000471396 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 TRIM37O94972 964 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 BAG6P46379 1132 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 DEFB132Q7Z7B7 95 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 MARCH10Q8NA82 808 aaPredicted RBP10.45□□□□□ -0.74
TRIM59-204ENST00000471396 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
TRIM59-204ENST00000471396 USHBP1Q8N6Y0 703 aa10.44□□□□□ -0.74
TRIM59-204ENST00000471396 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
TRIM59-204ENST00000471396 ZEB1P37275 1124 aaPredicted RBP10.43□□□□□ -0.74
TRIM59-204ENST00000471396 CC2D1BQ5T0F9 858 aaKnown RBP10.43□□□□□ -0.74
TRIM59-204ENST00000471396 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
TRIM59-204ENST00000471396 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
TRIM59-204ENST00000471396 PARD3Q8TEW0 1356 aa10.42□□□□□ -0.74
TRIM59-204ENST00000471396 NHSQ6T4R5 1651 aa10.42□□□□□ -0.74
TRIM59-204ENST00000471396 EIF4A2Q14240 407 aaKnown RBP10.42□□□□□ -0.74
TRIM59-204ENST00000471396 RGPD3A6NKT7 1758 aaPredicted RBP10.42□□□□□ -0.74
TRIM59-204ENST00000471396 RGPD4Q7Z3J3 1758 aa10.42□□□□□ -0.74
TRIM59-204ENST00000471396 APBA3O96018 575 aa10.41□□□□□ -0.74
TRIM59-204ENST00000471396 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
TRIM59-204ENST00000471396 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
TRIM59-204ENST00000471396 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
TRIM59-204ENST00000471396 EYA1Q99502 592 aa10.41□□□□□ -0.74
TRIM59-204ENST00000471396 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
TRIM59-204ENST00000471396 IGSF1Q8N6C5 1336 aa10.4□□□□□ -0.74
TRIM59-204ENST00000471396 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
TRIM59-204ENST00000471396 BCL11BQ9C0K0 894 aaPredicted RBP10.4□□□□□ -0.74
TRIM59-204ENST00000471396 RREB1Q92766 1687 aa10.4□□□□□ -0.74
TRIM59-204ENST00000471396 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
TRIM59-204ENST00000471396 DOT1LQ8TEK3 1739 aa10.39□□□□□ -0.75
TRIM59-204ENST00000471396 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
TRIM59-204ENST00000471396 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
TRIM59-204ENST00000471396 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
TRIM59-204ENST00000471396 PCDH11XQ9BZA7 1347 aa10.38□□□□□ -0.75
TRIM59-204ENST00000471396 PCDH11YQ9BZA8 1340 aa10.38□□□□□ -0.75
TRIM59-204ENST00000471396 MTHFSP49914 203 aa10.38□□□□□ -0.75
TRIM59-204ENST00000471396 CNGB1Q14028 1251 aaPredicted RBP10.38□□□□□ -0.75
TRIM59-204ENST00000471396 EZH2Q15910 746 aaKnown RBP10.38□□□□□ -0.75
TRIM59-204ENST00000471396 PTF1AQ7RTS3 328 aa10.38□□□□□ -0.75
TRIM59-204ENST00000471396 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
TRIM59-204ENST00000471396 BTAF1O14981 1849 aa10.37□□□□□ -0.75
TRIM59-204ENST00000471396 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
TRIM59-204ENST00000471396 IL13P35225 146 aa10.37□□□□□ -0.75
TRIM59-204ENST00000471396 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
TRIM59-204ENST00000471396 PLSCR1O15162 318 aa10.36□□□□□ -0.75
TRIM59-204ENST00000471396 KCNQ2O43526 872 aa10.36□□□□□ -0.75
TRIM59-204ENST00000471396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM59-204ENST00000471396 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
TRIM59-204ENST00000471396 KDRP35968 1356 aa10.36□□□□□ -0.75
TRIM59-204ENST00000471396 CYP27B1O15528 508 aa10.35□□□□□ -0.75
TRIM59-204ENST00000471396 TOGARAM1Q9Y4F4 1720 aa10.34□□□□□ -0.75
TRIM59-204ENST00000471396 DIAPH1O60610 1272 aaKnown RBP10.34□□□□□ -0.75
TRIM59-204ENST00000471396 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
TRIM59-204ENST00000471396 AEBP1Q8IUX7 1158 aa10.34□□□□□ -0.75
TRIM59-204ENST00000471396 PPP2R1AP30153 589 aa10.33□□□□□ -0.76
TRIM59-204ENST00000471396 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
TRIM59-204ENST00000471396 SYTL4Q96C24 671 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-204ENST00000471396 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-204ENST00000471396 NKX1-1Q15270 411 aaPredicted RBP10.32□□□□□ -0.76
TRIM59-204ENST00000471396 TXNRD1Q16881 649 aa10.32□□□□□ -0.76
TRIM59-204ENST00000471396 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
TRIM59-204ENST00000471396 IFNL2Q8IZJ0 200 aa10.32□□□□□ -0.76
TRIM59-204ENST00000471396 CFAP53Q96M91 514 aa10.32□□□□□ -0.76
TRIM59-204ENST00000471396 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms