RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
MRPL40-203ENST00000471259 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
MRPL40-203ENST00000471259 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
MRPL40-203ENST00000471259 UTRNP46939 3433 aa15.99■□□□□ 0.15
MRPL40-203ENST00000471259 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
MRPL40-203ENST00000471259 AMPHP49418 695 aa15.98■□□□□ 0.15
MRPL40-203ENST00000471259 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
MRPL40-203ENST00000471259 COG3Q96JB2 828 aa15.98■□□□□ 0.15
MRPL40-203ENST00000471259 CGNL1Q0VF96 1302 aa15.97■□□□□ 0.15
MRPL40-203ENST00000471259 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
MRPL40-203ENST00000471259 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
MRPL40-203ENST00000471259 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
MRPL40-203ENST00000471259 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
MRPL40-203ENST00000471259 USP47Q96K76 1375 aa15.97■□□□□ 0.15
MRPL40-203ENST00000471259 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
MRPL40-203ENST00000471259 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
MRPL40-203ENST00000471259 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
MRPL40-203ENST00000471259 COL24A1Q17RW2 1714 aa15.96■□□□□ 0.15
MRPL40-203ENST00000471259 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
MRPL40-203ENST00000471259 IFFO2Q5TF58 517 aa15.94■□□□□ 0.14
MRPL40-203ENST00000471259 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
MRPL40-203ENST00000471259 A0A1W2PP64 1363 aa15.93■□□□□ 0.14
MRPL40-203ENST00000471259 HOXC9P31274 260 aa15.93■□□□□ 0.14
MRPL40-203ENST00000471259 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
MRPL40-203ENST00000471259 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
MRPL40-203ENST00000471259 LY75O60449 1722 aa15.92■□□□□ 0.14
MRPL40-203ENST00000471259 CD2APQ9Y5K6 639 aa15.92■□□□□ 0.14
MRPL40-203ENST00000471259 NLGN2Q8NFZ4 835 aa15.91■□□□□ 0.14
MRPL40-203ENST00000471259 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
MRPL40-203ENST00000471259 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
MRPL40-203ENST00000471259 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
MRPL40-203ENST00000471259 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
MRPL40-203ENST00000471259 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
MRPL40-203ENST00000471259 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
MRPL40-203ENST00000471259 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
MRPL40-203ENST00000471259 KCNQ4P56696 695 aa15.88■□□□□ 0.13
MRPL40-203ENST00000471259 SMARCC1Q92922 1105 aaPredicted RBP15.88■□□□□ 0.13
MRPL40-203ENST00000471259 TUBGCP6Q96RT7 1819 aa15.88■□□□□ 0.13
MRPL40-203ENST00000471259 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
MRPL40-203ENST00000471259 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
MRPL40-203ENST00000471259 NSD2O96028 1365 aa15.87■□□□□ 0.13
MRPL40-203ENST00000471259 YBX3P16989 372 aaKnown RBP eCLIP15.87■□□□□ 0.133e-10■■□□□ 12
MRPL40-203ENST00000471259 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
MRPL40-203ENST00000471259 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
MRPL40-203ENST00000471259 AK7Q96M32 723 aa15.86■□□□□ 0.13
MRPL40-203ENST00000471259 ATP10DQ9P241 1426 aa15.85■□□□□ 0.13
MRPL40-203ENST00000471259 KIF24Q5T7B8 1368 aa15.84■□□□□ 0.13
MRPL40-203ENST00000471259 MEGF6O75095 1541 aa15.84■□□□□ 0.13
MRPL40-203ENST00000471259 NBPF6Q5VWK0 638 aa15.83■□□□□ 0.12
MRPL40-203ENST00000471259 MSL1Q68DK7 614 aa15.83■□□□□ 0.12
MRPL40-203ENST00000471259 NBPF4Q96M43 638 aa15.83■□□□□ 0.12
MRPL40-203ENST00000471259 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
MRPL40-203ENST00000471259 HSPA6P17066 643 aa15.82■□□□□ 0.12
MRPL40-203ENST00000471259 CDCA8Q53HL2 280 aa15.82■□□□□ 0.12
MRPL40-203ENST00000471259 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
MRPL40-203ENST00000471259 C5P01031 1676 aa15.82■□□□□ 0.12
MRPL40-203ENST00000471259 INSRP06213 1382 aa15.8■□□□□ 0.12
MRPL40-203ENST00000471259 FLT4P35916 1363 aa15.8■□□□□ 0.12
MRPL40-203ENST00000471259 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
MRPL40-203ENST00000471259 TMF1P82094 1093 aa15.8■□□□□ 0.12
MRPL40-203ENST00000471259 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
MRPL40-203ENST00000471259 RGPD2P0DJD1 1756 aa15.8■□□□□ 0.12
MRPL40-203ENST00000471259 SSFA2P28290 1259 aa15.79■□□□□ 0.12
MRPL40-203ENST00000471259 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
MRPL40-203ENST00000471259 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
MRPL40-203ENST00000471259 IGSF1Q8N6C5 1336 aa15.78■□□□□ 0.12
MRPL40-203ENST00000471259 FYB1O15117 783 aa15.78■□□□□ 0.12
MRPL40-203ENST00000471259 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
MRPL40-203ENST00000471259 TESK2Q96S53 571 aa15.78■□□□□ 0.12
MRPL40-203ENST00000471259 ADCY9O60503 1353 aa15.77■□□□□ 0.12
MRPL40-203ENST00000471259 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
MRPL40-203ENST00000471259 TAF1LQ8IZX4 1826 aa15.77■□□□□ 0.11
MRPL40-203ENST00000471259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
MRPL40-203ENST00000471259 FBLN1P23142 703 aa15.76■□□□□ 0.11
MRPL40-203ENST00000471259 ZNF526Q8TF50 670 aaPredicted RBP15.76■□□□□ 0.11
MRPL40-203ENST00000471259 C4BP0C0L5 1744 aa15.76■□□□□ 0.11
MRPL40-203ENST00000471259 PHF14O94880 888 aa15.75■□□□□ 0.11
MRPL40-203ENST00000471259 CYP27B1O15528 508 aa15.74■□□□□ 0.11
MRPL40-203ENST00000471259 NKX1-1Q15270 411 aaPredicted RBP15.74■□□□□ 0.11
MRPL40-203ENST00000471259 HSP90AB2PQ58FF8 381 aa15.74■□□□□ 0.11
MRPL40-203ENST00000471259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.74■□□□□ 0.11
MRPL40-203ENST00000471259 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
MRPL40-203ENST00000471259 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
MRPL40-203ENST00000471259 APLP1P51693 650 aa15.73■□□□□ 0.11
MRPL40-203ENST00000471259 SIK1P57059 783 aa15.73■□□□□ 0.11
MRPL40-203ENST00000471259 TGFB2P61812 414 aa15.72■□□□□ 0.11
MRPL40-203ENST00000471259 PIGBQ92521 554 aa15.72■□□□□ 0.11
MRPL40-203ENST00000471259 ITGB4P16144 1822 aa15.71■□□□□ 0.11
MRPL40-203ENST00000471259 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
MRPL40-203ENST00000471259 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
MRPL40-203ENST00000471259 GNPATO15228 680 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 TOMM70O94826 608 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 ATP6V1AP38606 617 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 CEP350Q5VT06 3117 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 KIF20BQ96Q89 1820 aa15.7■□□□□ 0.1
MRPL40-203ENST00000471259 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
MRPL40-203ENST00000471259 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
MRPL40-203ENST00000471259 RTCBQ9Y3I0 505 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms