RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 IL2RBP14784 551 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 MTHFSP49914 203 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
PTPRE-207ENST00000471218 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
PTPRE-207ENST00000471218 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-207ENST00000471218 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-207ENST00000471218 PTGER2P43116 358 aa12.11□□□□□ -0.47
PTPRE-207ENST00000471218 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
PTPRE-207ENST00000471218 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
PTPRE-207ENST00000471218 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
PTPRE-207ENST00000471218 SOX12O15370 315 aa12.1□□□□□ -0.47
PTPRE-207ENST00000471218 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
PTPRE-207ENST00000471218 ARXQ96QS3 562 aa12.1□□□□□ -0.47
PTPRE-207ENST00000471218 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
PTPRE-207ENST00000471218 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
PTPRE-207ENST00000471218 POLD1P28340 1107 aa12.09□□□□□ -0.47
PTPRE-207ENST00000471218 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-207ENST00000471218 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-207ENST00000471218 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
PTPRE-207ENST00000471218 COL18A1P39060 1754 aa12.09□□□□□ -0.47
PTPRE-207ENST00000471218 ERBB3P21860 1342 aa12.09□□□□□ -0.47
PTPRE-207ENST00000471218 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
PTPRE-207ENST00000471218 NME9Q86XW9 330 aa12.08□□□□□ -0.48
PTPRE-207ENST00000471218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPRE-207ENST00000471218 UTRNP46939 3433 aa12.08□□□□□ -0.48
PTPRE-207ENST00000471218 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
PTPRE-207ENST00000471218 PIK3C2AO00443 1686 aa12.07□□□□□ -0.48
PTPRE-207ENST00000471218 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
PTPRE-207ENST00000471218 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
PTPRE-207ENST00000471218 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
PTPRE-207ENST00000471218 CASZ1Q86V15 1759 aa12.06□□□□□ -0.48
PTPRE-207ENST00000471218 DIAPH1O60610 1272 aaKnown RBP12.06□□□□□ -0.48
PTPRE-207ENST00000471218 CCDC27Q2M243 656 aa12.06□□□□□ -0.48
PTPRE-207ENST00000471218 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
PTPRE-207ENST00000471218 GPR162Q16538 588 aa12.05□□□□□ -0.48
PTPRE-207ENST00000471218 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
PTPRE-207ENST00000471218 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
PTPRE-207ENST00000471218 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
PTPRE-207ENST00000471218 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
PTPRE-207ENST00000471218 FLT4P35916 1363 aa12.05□□□□□ -0.48
PTPRE-207ENST00000471218 FCHSD2O94868 740 aa12.04□□□□□ -0.48
PTPRE-207ENST00000471218 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-207ENST00000471218 IP6K1Q92551 441 aa12.04□□□□□ -0.48
PTPRE-207ENST00000471218 NFAT5O94916 1531 aa12.04□□□□□ -0.48
PTPRE-207ENST00000471218 ZNF521Q96K83 1311 aa12.04□□□□□ -0.48
PTPRE-207ENST00000471218 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
PTPRE-207ENST00000471218 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
PTPRE-207ENST00000471218 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
PTPRE-207ENST00000471218 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
PTPRE-207ENST00000471218 C1QTNF8P60827 252 aa12.01□□□□□ -0.49
PTPRE-207ENST00000471218 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
PTPRE-207ENST00000471218 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
PTPRE-207ENST00000471218 CHD4Q14839 1912 aa12.01□□□□□ -0.49
PTPRE-207ENST00000471218 PLEKHG2Q9H7P9 1386 aa12.01□□□□□ -0.49
PTPRE-207ENST00000471218 NHSQ6T4R5 1651 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 NEFMP07197 916 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
PTPRE-207ENST00000471218 IL13P35225 146 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 AMPHP49418 695 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
PTPRE-207ENST00000471218 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 AKT1S1Q96B36 256 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 RGPD5Q99666 1765 aa12□□□□□ -0.49
PTPRE-207ENST00000471218 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
PTPRE-207ENST00000471218 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
PTPRE-207ENST00000471218 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
PTPRE-207ENST00000471218 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
PTPRE-207ENST00000471218 MAPK8IP3Q9UPT6 1336 aa11.99□□□□□ -0.49
PTPRE-207ENST00000471218 IL16Q14005 1332 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 E9PSI1 815 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
PTPRE-207ENST00000471218 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
PTPRE-207ENST00000471218 KDRP35968 1356 aa11.97□□□□□ -0.49
PTPRE-207ENST00000471218 APAF1O14727 1248 aa11.97□□□□□ -0.49
PTPRE-207ENST00000471218 NEFLP07196 543 aa11.97□□□□□ -0.49
PTPRE-207ENST00000471218 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
PTPRE-207ENST00000471218 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
PTPRE-207ENST00000471218 RAPGEF4Q8WZA2 1011 aa11.97□□□□□ -0.49
PTPRE-207ENST00000471218 MAP2P11137 1827 aaKnown RBP11.97□□□□□ -0.49
PTPRE-207ENST00000471218 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
PTPRE-207ENST00000471218 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
PTPRE-207ENST00000471218 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.49
PTPRE-207ENST00000471218 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
PTPRE-207ENST00000471218 TRMT2AQ8IZ69 625 aaKnown RBP11.96□□□□□ -0.49
PTPRE-207ENST00000471218 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
PTPRE-207ENST00000471218 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
PTPRE-207ENST00000471218 CCNL1Q9UK58 526 aaPredicted RBP11.96□□□□□ -0.49
PTPRE-207ENST00000471218 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
PTPRE-207ENST00000471218 HOXC9P31274 260 aa11.95□□□□□ -0.5
PTPRE-207ENST00000471218 RRS1Q15050 365 aaKnown RBP11.95□□□□□ -0.5
PTPRE-207ENST00000471218 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
PTPRE-207ENST00000471218 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms