RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	5e-20	■■■□□ 14.8
HDLBP-233	ENST00000470710	CRB1	P82279	1406 aa		11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	RGPD5	Q99666	1765 aa		11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	SLIT2	O94813	1529 aa		11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	TAT	P17735	454 aa	Predicted RBP	11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	STRN4	Q9NRL3	753 aa		11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	MAP3K5	Q99683	1374 aa		11.37	□□□□□ -0.59
HDLBP-233	ENST00000470710	MEGF6	O75095	1541 aa		11.36	□□□□□ -0.59
HDLBP-233	ENST00000470710	GNAT3	A8MTJ3	354 aa		11.36	□□□□□ -0.59
HDLBP-233	ENST00000470710	MYH16	Q9H6N6	1097 aa		11.36	□□□□□ -0.59
HDLBP-233	ENST00000470710	OVOS2	A0A0G2JMS6	1433 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	AKAP4	Q5JQC9	854 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	RTF1	Q92541	710 aa	Known RBP	11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	IFT57	Q9NWB7	429 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	SPG7	Q9UQ90	795 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	RGPD2	P0DJD1	1756 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	LRP6	O75581	1613 aa		11.35	□□□□□ -0.59
HDLBP-233	ENST00000470710	ZNF853	P0CG23	659 aa		11.34	□□□□□ -0.59
HDLBP-233	ENST00000470710	IL2RB	P14784	551 aa		11.34	□□□□□ -0.59
HDLBP-233	ENST00000470710	GNAI1	P63096	354 aa		11.34	□□□□□ -0.59
HDLBP-233	ENST00000470710	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.34	□□□□□ -0.59
HDLBP-233	ENST00000470710	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.34	□□□□□ -0.59
HDLBP-233	ENST00000470710	CEMIP	Q8WUJ3	1361 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	DCTN1	Q14203	1278 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	C1orf141	Q5JVX7	400 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	MCM10	Q7L590	875 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	UNC5CL	Q8IV45	518 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	CFAP44	Q96MT7	982 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	THUMPD2	Q9BTF0	503 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	THRAP3	Q9Y2W1	955 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	DISP2	A7MBM2	1401 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	FANCI	Q9NVI1	1328 aa		11.33	□□□□□ -0.6
HDLBP-233	ENST00000470710	CT47B1	P0C2W7	299 aa	Predicted RBP	11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	IL17RE	Q8NFR9	667 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	NGLY1	Q96IV0	654 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	C8orf37	Q96NL8	207 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	BABAM1	Q9NWV8	329 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	PLCH1	Q4KWH8	1693 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	SPATA31A1	Q5TZJ5	1347 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	SPATA31A5	Q5VU36	1347 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	SPATA31A7	Q8IWB4	1347 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	NRAP	Q86VF7	1730 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	NWD2	Q9ULI1	1742 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	BCL9L	Q86UU0	1499 aa		11.32	□□□□□ -0.6
HDLBP-233	ENST00000470710	CHL1	O00533	1208 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	PHKG2	P15735	406 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	VPS72	Q15906	364 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	IFNL2	Q8IZJ0	200 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	ZCRB1	Q8TBF4	217 aa	Known RBP	11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	RCAN3	Q9UKA8	241 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	PCDH11X	Q9BZA7	1347 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	PCDH11Y	Q9BZA8	1340 aa		11.31	□□□□□ -0.6
HDLBP-233	ENST00000470710	CYP27B1	O15528	508 aa		11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	RNMT	O43148	476 aa	Known RBP	11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	HSP90AB1	P08238	724 aa	Known RBP	11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	TSR2	Q969E8	191 aa	Known RBP	11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	MBIP	Q9NS73	344 aa		11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	RNF123	Q5XPI4	1314 aa		11.3	□□□□□ -0.6
HDLBP-233	ENST00000470710	PKD1L3	Q7Z443	1732 aa		11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	DLG5	Q8TDM6	1919 aa		11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	LRRC37A3	O60309	1634 aa		11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	MEX3C	Q5U5Q3	659 aa	Known RBP	11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	BARGIN	Q6ZT62	677 aa		11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	FBXO41	Q8TF61	875 aa		11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	PARP4	Q9UKK3	1724 aa	Known RBP	11.29	□□□□□ -0.6
HDLBP-233	ENST00000470710	NKX1-1	Q15270	411 aa	Predicted RBP	11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	TAF7	Q15545	349 aa	Predicted RBP	11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	MPRIP	Q6WCQ1	1025 aa		11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	DCAF5	Q96JK2	942 aa		11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	LGR6	Q9HBX8	967 aa		11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	USP35	Q9P2H5	1018 aa		11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	LAS1L	Q9Y4W2	734 aa	Known RBP	11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.28	□□□□□ -0.6
HDLBP-233	ENST00000470710	KDM6A	O15550	1401 aa	Predicted RBP	11.27	□□□□□ -0.6
HDLBP-233	ENST00000470710	EXOSC9	Q06265	439 aa	Known RBP	11.27	□□□□□ -0.61
HDLBP-233	ENST00000470710	ZNF428	Q96B54	188 aa		11.27	□□□□□ -0.61
HDLBP-233	ENST00000470710	USP21	Q9UK80	565 aa		11.27	□□□□□ -0.61
HDLBP-233	ENST00000470710	AFF2	P51816	1311 aa		11.27	□□□□□ -0.61
HDLBP-233	ENST00000470710	ADAMTS7	Q9UKP4	1686 aa		11.27	□□□□□ -0.61
HDLBP-233	ENST00000470710	TEF	Q10587	303 aa		11.26	□□□□□ -0.61
HDLBP-233	ENST00000470710	TSPYL4	Q9UJ04	414 aa		11.26	□□□□□ -0.61
HDLBP-233	ENST00000470710	CCDC9	Q9Y3X0	531 aa	Known RBP	11.26	□□□□□ -0.61
HDLBP-233	ENST00000470710	TNS2	Q63HR2	1409 aa		11.26	□□□□□ -0.61
HDLBP-233	ENST00000470710	MRC1	P22897	1456 aa		11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	EXOC5	O00471	708 aa		11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	RARS	P54136	660 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	SLC52A2	Q9HAB3	445 aa		11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	ATRN	O75882	1429 aa		11.25	□□□□□ -0.61
HDLBP-233	ENST00000470710	ERVV-2	B6SEH9	535 aa		11.24	□□□□□ -0.61
HDLBP-233	ENST00000470710	RRP1	P56182	461 aa	Known RBP	11.24	□□□□□ -0.61
HDLBP-233	ENST00000470710	DDX54	Q8TDD1	881 aa	Known RBP	11.24	□□□□□ -0.61
HDLBP-233	ENST00000470710	SOS1	Q07889	1333 aa	Predicted RBP	11.24	□□□□□ -0.61
HDLBP-233	ENST00000470710	BTBD11	A6QL63	1104 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	VAMP4	O75379	141 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	NEFL	P07196	543 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	DDB1	Q16531	1140 aa		11.23	□□□□□ -0.61

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