RNA–Protein interactions for RNA: ENST00000470518.5

SGSM3-208, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-208ENST00000470518 STK32BQ9NY57 414 aa18.81■□□□□ 0.6
SGSM3-208ENST00000470518 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
SGSM3-208ENST00000470518 ATF5Q9Y2D1 282 aaPredicted RBP18.8■□□□□ 0.6
SGSM3-208ENST00000470518 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 KAT6BQ8WYB5 2073 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 NBPF6Q5VWK0 638 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 AKT1S1Q96B36 256 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 NBPF4Q96M43 638 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 CARD14Q9BXL6 1004 aa18.79■□□□□ 0.6
SGSM3-208ENST00000470518 C5P01031 1676 aa18.78■□□□□ 0.6
SGSM3-208ENST00000470518 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 INSRP06213 1382 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
SGSM3-208ENST00000470518 KCNQ4P56696 695 aa18.76■□□□□ 0.59
SGSM3-208ENST00000470518 TMF1P82094 1093 aa18.76■□□□□ 0.59
SGSM3-208ENST00000470518 DDX54Q8TDD1 881 aaKnown RBP18.76■□□□□ 0.59
SGSM3-208ENST00000470518 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
SGSM3-208ENST00000470518 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
SGSM3-208ENST00000470518 ITGB4P16144 1822 aa18.75■□□□□ 0.59
SGSM3-208ENST00000470518 AMPHP49418 695 aa18.75■□□□□ 0.59
SGSM3-208ENST00000470518 FLT4P35916 1363 aa18.75■□□□□ 0.59
SGSM3-208ENST00000470518 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
SGSM3-208ENST00000470518 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
SGSM3-208ENST00000470518 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
SGSM3-208ENST00000470518 YY1P25490 414 aa18.73■□□□□ 0.59
SGSM3-208ENST00000470518 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
SGSM3-208ENST00000470518 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
SGSM3-208ENST00000470518 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
SGSM3-208ENST00000470518 ZCRB1Q8TBF4 217 aaKnown RBP18.72■□□□□ 0.59
SGSM3-208ENST00000470518 SMG6Q86US8 1419 aaKnown RBP18.72■□□□□ 0.59
SGSM3-208ENST00000470518 SLC27A3Q5K4L6 730 aa18.71■□□□□ 0.59
SGSM3-208ENST00000470518 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
SGSM3-208ENST00000470518 CHD4Q14839 1912 aa18.69■□□□□ 0.58
SGSM3-208ENST00000470518 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
SGSM3-208ENST00000470518 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
SGSM3-208ENST00000470518 C4BP0C0L5 1744 aa18.67■□□□□ 0.58
SGSM3-208ENST00000470518 CYP27B1O15528 508 aa18.67■□□□□ 0.58
SGSM3-208ENST00000470518 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
SGSM3-208ENST00000470518 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
SGSM3-208ENST00000470518 ARXQ96QS3 562 aa18.67■□□□□ 0.58
SGSM3-208ENST00000470518 CEP350Q5VT06 3117 aa18.65■□□□□ 0.58
SGSM3-208ENST00000470518 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
SGSM3-208ENST00000470518 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
SGSM3-208ENST00000470518 AMIGO3Q86WK7 504 aa18.64■□□□□ 0.57
SGSM3-208ENST00000470518 PALLDQ8WX93 1383 aa18.63■□□□□ 0.57
SGSM3-208ENST00000470518 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
SGSM3-208ENST00000470518 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
SGSM3-208ENST00000470518 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
SGSM3-208ENST00000470518 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
SGSM3-208ENST00000470518 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
SGSM3-208ENST00000470518 COL23A1Q86Y22 540 aaPredicted RBP18.6■□□□□ 0.57
SGSM3-208ENST00000470518 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
SGSM3-208ENST00000470518 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
SGSM3-208ENST00000470518 ZNF784Q8NCA9 323 aaPredicted RBP18.59■□□□□ 0.57
SGSM3-208ENST00000470518 POLKQ9UBT6 870 aa18.59■□□□□ 0.57
SGSM3-208ENST00000470518 EYA1Q99502 592 aa18.58■□□□□ 0.56
SGSM3-208ENST00000470518 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
SGSM3-208ENST00000470518 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
SGSM3-208ENST00000470518 KIAA1551Q9HCM1 1747 aa18.56■□□□□ 0.56
SGSM3-208ENST00000470518 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
SGSM3-208ENST00000470518 KDRP35968 1356 aa18.55■□□□□ 0.56
SGSM3-208ENST00000470518 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
SGSM3-208ENST00000470518 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
SGSM3-208ENST00000470518 SMIM5Q71RC9 77 aa18.54■□□□□ 0.56
SGSM3-208ENST00000470518 PIGBQ92521 554 aa18.54■□□□□ 0.56
SGSM3-208ENST00000470518 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
SGSM3-208ENST00000470518 KDM6AO15550 1401 aaPredicted RBP18.53■□□□□ 0.56
SGSM3-208ENST00000470518 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
SGSM3-208ENST00000470518 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
SGSM3-208ENST00000470518 MPRIPQ6WCQ1 1025 aa18.53■□□□□ 0.56
SGSM3-208ENST00000470518 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.56
SGSM3-208ENST00000470518 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
SGSM3-208ENST00000470518 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
SGSM3-208ENST00000470518 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
SGSM3-208ENST00000470518 CICQ96RK0 1608 aaPredicted RBP18.52■□□□□ 0.55
SGSM3-208ENST00000470518 PHKG2P15735 406 aa18.51■□□□□ 0.55
SGSM3-208ENST00000470518 POLD1P28340 1107 aa18.51■□□□□ 0.55
SGSM3-208ENST00000470518 LINC00116Q8NCU8 138 aa18.51■□□□□ 0.55
SGSM3-208ENST00000470518 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
SGSM3-208ENST00000470518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
SGSM3-208ENST00000470518 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
SGSM3-208ENST00000470518 ITPK1Q13572 414 aa18.49■□□□□ 0.55
SGSM3-208ENST00000470518 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
SGSM3-208ENST00000470518 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
SGSM3-208ENST00000470518 TJP1Q07157 1748 aa18.49■□□□□ 0.55
SGSM3-208ENST00000470518 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
SGSM3-208ENST00000470518 ASAP1Q9ULH1 1129 aa18.48■□□□□ 0.55
SGSM3-208ENST00000470518 SLC4A9Q96Q91 983 aa18.47■□□□□ 0.55
SGSM3-208ENST00000470518 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
SGSM3-208ENST00000470518 LOC102724428A0A0B4J2F2 783 aa18.46■□□□□ 0.55
SGSM3-208ENST00000470518 SIK1P57059 783 aa18.46■□□□□ 0.55
SGSM3-208ENST00000470518 PANK3Q9H999 370 aa18.46■□□□□ 0.55
SGSM3-208ENST00000470518 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
SGSM3-208ENST00000470518 ADAMTS7Q9UKP4 1686 aa18.46■□□□□ 0.55
SGSM3-208ENST00000470518 GPR162Q16538 588 aa18.45■□□□□ 0.54
SGSM3-208ENST00000470518 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
SGSM3-208ENST00000470518 ATG3Q9NT62 314 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms