RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
COL4A5-203ENST00000470339 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
COL4A5-203ENST00000470339 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
COL4A5-203ENST00000470339 RTF1Q92541 710 aaKnown RBP19.71■□□□□ 0.75
COL4A5-203ENST00000470339 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
COL4A5-203ENST00000470339 CRB1P82279 1406 aa19.7■□□□□ 0.74
COL4A5-203ENST00000470339 HSPA1LP34931 641 aa19.7■□□□□ 0.74
COL4A5-203ENST00000470339 IFT57Q9NWB7 429 aa19.7■□□□□ 0.74
COL4A5-203ENST00000470339 PKD1L3Q7Z443 1732 aa19.7■□□□□ 0.74
COL4A5-203ENST00000470339 VIRMAQ69YN4 1812 aaKnown RBP19.69■□□□□ 0.74
COL4A5-203ENST00000470339 NRAPQ86VF7 1730 aa19.69■□□□□ 0.74
COL4A5-203ENST00000470339 GNAI1P63096 354 aa19.69■□□□□ 0.74
COL4A5-203ENST00000470339 ADAMTS2O95450 1211 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 LARP1Q6PKG0 1096 aaKnown RBP19.68■□□□□ 0.74
COL4A5-203ENST00000470339 CFAP44Q96MT7 982 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 STRN4Q9NRL3 753 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 RCAN3Q9UKA8 241 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
COL4A5-203ENST00000470339 LRRC37A3O60309 1634 aa19.67■□□□□ 0.74
COL4A5-203ENST00000470339 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
COL4A5-203ENST00000470339 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
COL4A5-203ENST00000470339 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
COL4A5-203ENST00000470339 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
COL4A5-203ENST00000470339 ZNF530Q6P9A1 599 aaPredicted RBP19.66■□□□□ 0.74
COL4A5-203ENST00000470339 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
COL4A5-203ENST00000470339 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
COL4A5-203ENST00000470339 MEGF6O75095 1541 aa19.66■□□□□ 0.74
COL4A5-203ENST00000470339 SLIT2O94813 1529 aa19.66■□□□□ 0.74
COL4A5-203ENST00000470339 C1orf141Q5JVX7 400 aa19.65■□□□□ 0.74
COL4A5-203ENST00000470339 THUMPD2Q9BTF0 503 aaKnown RBP19.65■□□□□ 0.74
COL4A5-203ENST00000470339 BABAM1Q9NWV8 329 aa19.65■□□□□ 0.74
COL4A5-203ENST00000470339 FANCIQ9NVI1 1328 aa19.65■□□□□ 0.74
COL4A5-203ENST00000470339 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
COL4A5-203ENST00000470339 ADAMTS7Q9UKP4 1686 aa19.65■□□□□ 0.74
COL4A5-203ENST00000470339 DCTN1Q14203 1278 aa19.64■□□□□ 0.73
COL4A5-203ENST00000470339 MCM10Q7L590 875 aa19.64■□□□□ 0.73
COL4A5-203ENST00000470339 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
COL4A5-203ENST00000470339 CHL1O00533 1208 aa19.63■□□□□ 0.73
COL4A5-203ENST00000470339 IL2RBP14784 551 aa19.63■□□□□ 0.73
COL4A5-203ENST00000470339 IL17REQ8NFR9 667 aa19.63■□□□□ 0.73
COL4A5-203ENST00000470339 WNK3Q9BYP7 1800 aa19.62■□□□□ 0.73
COL4A5-203ENST00000470339 SCN11AQ9UI33 1791 aa19.62■□□□□ 0.73
COL4A5-203ENST00000470339 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
COL4A5-203ENST00000470339 THRAP3Q9Y2W1 955 aaKnown RBP19.61■□□□□ 0.73
COL4A5-203ENST00000470339 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.6■□□□□ 0.73
COL4A5-203ENST00000470339 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
COL4A5-203ENST00000470339 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
COL4A5-203ENST00000470339 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
COL4A5-203ENST00000470339 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
COL4A5-203ENST00000470339 NEFLP07196 543 aa19.59■□□□□ 0.73
COL4A5-203ENST00000470339 PHKG2P15735 406 aa19.59■□□□□ 0.73
COL4A5-203ENST00000470339 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
COL4A5-203ENST00000470339 ZCRB1Q8TBF4 217 aaKnown RBP19.59■□□□□ 0.73
COL4A5-203ENST00000470339 ZNF428Q96B54 188 aa19.59■□□□□ 0.73
COL4A5-203ENST00000470339 CDCA7Q9BWT1 371 aaPredicted RBP19.59■□□□□ 0.73
COL4A5-203ENST00000470339 MBIPQ9NS73 344 aa19.59■□□□□ 0.73
COL4A5-203ENST00000470339 LRP6O75581 1613 aa19.58■□□□□ 0.73
COL4A5-203ENST00000470339 SIPA1L3O60292 1781 aaPredicted RBP19.58■□□□□ 0.73
COL4A5-203ENST00000470339 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
COL4A5-203ENST00000470339 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
COL4A5-203ENST00000470339 UNC5CLQ8IV45 518 aa19.58■□□□□ 0.72
COL4A5-203ENST00000470339 NGLY1Q96IV0 654 aa19.58■□□□□ 0.72
COL4A5-203ENST00000470339 SHANK3Q9BYB0 1731 aa19.58■□□□□ 0.72
COL4A5-203ENST00000470339 DISP2A7MBM2 1401 aa19.58■□□□□ 0.72
COL4A5-203ENST00000470339 SPATA31A1Q5TZJ5 1347 aa19.57■□□□□ 0.72
COL4A5-203ENST00000470339 PCDH11XQ9BZA7 1347 aa19.57■□□□□ 0.72
COL4A5-203ENST00000470339 PCDH11YQ9BZA8 1340 aa19.57■□□□□ 0.72
COL4A5-203ENST00000470339 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
COL4A5-203ENST00000470339 SPATA31A5Q5VU36 1347 aa19.56■□□□□ 0.72
COL4A5-203ENST00000470339 SPATA31A7Q8IWB4 1347 aa19.56■□□□□ 0.72
COL4A5-203ENST00000470339 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
COL4A5-203ENST00000470339 BCL9LQ86UU0 1499 aa19.55■□□□□ 0.72
COL4A5-203ENST00000470339 CYP27B1O15528 508 aa19.55■□□□□ 0.72
COL4A5-203ENST00000470339 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
COL4A5-203ENST00000470339 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
COL4A5-203ENST00000470339 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
COL4A5-203ENST00000470339 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
COL4A5-203ENST00000470339 TEFQ10587 303 aa19.54■□□□□ 0.72
COL4A5-203ENST00000470339 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
COL4A5-203ENST00000470339 VPS72Q15906 364 aa19.54■□□□□ 0.72
COL4A5-203ENST00000470339 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
COL4A5-203ENST00000470339 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
COL4A5-203ENST00000470339 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
COL4A5-203ENST00000470339 BARGINQ6ZT62 677 aa19.53■□□□□ 0.72
COL4A5-203ENST00000470339 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
COL4A5-203ENST00000470339 USP35Q9P2H5 1018 aa19.53■□□□□ 0.72
COL4A5-203ENST00000470339 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
COL4A5-203ENST00000470339 ERICH6BQ5W0A0 696 aa19.52■□□□□ 0.72
COL4A5-203ENST00000470339 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
COL4A5-203ENST00000470339 VAMP4O75379 141 aa19.51■□□□□ 0.71
COL4A5-203ENST00000470339 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
COL4A5-203ENST00000470339 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
COL4A5-203ENST00000470339 MRC1P22897 1456 aa19.51■□□□□ 0.71
COL4A5-203ENST00000470339 USP21Q9UK80 565 aa19.5■□□□□ 0.71
COL4A5-203ENST00000470339 CACNA1FO60840 1977 aa19.5■□□□□ 0.71
COL4A5-203ENST00000470339 ERVV-2B6SEH9 535 aa19.49■□□□□ 0.71
COL4A5-203ENST00000470339 EXOC5O00471 708 aa19.49■□□□□ 0.71
COL4A5-203ENST00000470339 TWISTNBQ3B726 338 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms