RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 VAMP4O75379 141 aa18.98■□□□□ 0.63
SCYL3-205ENST00000470238 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
SCYL3-205ENST00000470238 BRPF1P55201 1214 aaPredicted RBP18.98■□□□□ 0.63
SCYL3-205ENST00000470238 MAP3K5Q99683 1374 aa18.98■□□□□ 0.63
SCYL3-205ENST00000470238 ABCC6O95255 1503 aa18.98■□□□□ 0.63
SCYL3-205ENST00000470238 ZC3H6P61129 1189 aaKnown RBP18.97■□□□□ 0.63
SCYL3-205ENST00000470238 TWISTNBQ3B726 338 aaPredicted RBP18.97■□□□□ 0.63
SCYL3-205ENST00000470238 FTSJ3Q8IY81 847 aaKnown RBP18.97■□□□□ 0.63
SCYL3-205ENST00000470238 COG6Q9Y2V7 657 aa18.97■□□□□ 0.63
SCYL3-205ENST00000470238 CRYBG1Q9Y4K1 1723 aa18.97■□□□□ 0.63
SCYL3-205ENST00000470238 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
SCYL3-205ENST00000470238 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
SCYL3-205ENST00000470238 DZIP1LQ8IYY4 767 aaKnown RBP18.96■□□□□ 0.63
SCYL3-205ENST00000470238 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
SCYL3-205ENST00000470238 KIAA0232Q92628 1395 aa18.96■□□□□ 0.62
SCYL3-205ENST00000470238 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
SCYL3-205ENST00000470238 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 RLBP1P12271 317 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 C8orf58Q8NAV2 365 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 NOB1Q9ULX3 412 aaKnown RBP18.95■□□□□ 0.62
SCYL3-205ENST00000470238 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
SCYL3-205ENST00000470238 ERBB3P21860 1342 aa18.94■□□□□ 0.62
SCYL3-205ENST00000470238 TRIM27P14373 513 aa18.94■□□□□ 0.62
SCYL3-205ENST00000470238 CENPQQ7L2Z9 268 aaPredicted RBP18.94■□□□□ 0.62
SCYL3-205ENST00000470238 CLUAP1Q96AJ1 413 aa18.94■□□□□ 0.62
SCYL3-205ENST00000470238 CPDO75976 1380 aa18.93■□□□□ 0.62
SCYL3-205ENST00000470238 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
SCYL3-205ENST00000470238 PLEKHO1Q53GL0 409 aaPredicted RBP18.93■□□□□ 0.62
SCYL3-205ENST00000470238 TNNQ9UQP3 1299 aa18.93■□□□□ 0.62
SCYL3-205ENST00000470238 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
SCYL3-205ENST00000470238 ELL2O00472 640 aaPredicted RBP18.92■□□□□ 0.62
SCYL3-205ENST00000470238 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
SCYL3-205ENST00000470238 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
SCYL3-205ENST00000470238 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
SCYL3-205ENST00000470238 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
SCYL3-205ENST00000470238 COL18A1P39060 1754 aa18.92■□□□□ 0.62
SCYL3-205ENST00000470238 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
SCYL3-205ENST00000470238 LMO7Q8WWI1 1683 aa18.91■□□□□ 0.62
SCYL3-205ENST00000470238 ARHGAP45Q92619 1136 aa18.91■□□□□ 0.62
SCYL3-205ENST00000470238 BABAM1Q9NWV8 329 aa18.91■□□□□ 0.62
SCYL3-205ENST00000470238 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
SCYL3-205ENST00000470238 FAM208AQ9UK61 1670 aaKnown RBP18.9■□□□□ 0.62
SCYL3-205ENST00000470238 IL17REQ8NFR9 667 aa18.89■□□□□ 0.61
SCYL3-205ENST00000470238 AKAP4Q5JQC9 854 aa18.88■□□□□ 0.61
SCYL3-205ENST00000470238 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
SCYL3-205ENST00000470238 DDX19BQ9UMR2 479 aa18.88■□□□□ 0.61
SCYL3-205ENST00000470238 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
SCYL3-205ENST00000470238 CEMIPQ8WUJ3 1361 aa18.87■□□□□ 0.61
SCYL3-205ENST00000470238 PLEKHG2Q9H7P9 1386 aa18.86■□□□□ 0.61
SCYL3-205ENST00000470238 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
SCYL3-205ENST00000470238 ITPRIPQ8IWB1 547 aa18.86■□□□□ 0.61
SCYL3-205ENST00000470238 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
SCYL3-205ENST00000470238 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
SCYL3-205ENST00000470238 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
SCYL3-205ENST00000470238 CHRNA2Q15822 529 aa18.85■□□□□ 0.61
SCYL3-205ENST00000470238 OVOS2A0A0G2JMS6 1433 aa18.85■□□□□ 0.61
SCYL3-205ENST00000470238 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
SCYL3-205ENST00000470238 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
SCYL3-205ENST00000470238 KRT24Q2M2I5 525 aa18.84■□□□□ 0.61
SCYL3-205ENST00000470238 TMEM57Q8N5G2 664 aa18.84■□□□□ 0.61
SCYL3-205ENST00000470238 RAPGEF4Q8WZA2 1011 aa18.84■□□□□ 0.61
SCYL3-205ENST00000470238 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
SCYL3-205ENST00000470238 PRDM11Q9NQV5 511 aa18.84■□□□□ 0.61
SCYL3-205ENST00000470238 ABCA3Q99758 1704 aa18.83■□□□□ 0.6
SCYL3-205ENST00000470238 CHMP4BQ9H444 224 aaKnown RBP18.83■□□□□ 0.6
SCYL3-205ENST00000470238 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
SCYL3-205ENST00000470238 TATP17735 454 aaPredicted RBP18.81■□□□□ 0.6
SCYL3-205ENST00000470238 ABCC4O15439 1325 aa18.81■□□□□ 0.6
SCYL3-205ENST00000470238 TEFQ10587 303 aa18.8■□□□□ 0.6
SCYL3-205ENST00000470238 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
SCYL3-205ENST00000470238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCYL3-205ENST00000470238 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
SCYL3-205ENST00000470238 RNMTO43148 476 aaKnown RBP18.79■□□□□ 0.6
SCYL3-205ENST00000470238 IGHDP01880 384 aa18.79■□□□□ 0.6
SCYL3-205ENST00000470238 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
SCYL3-205ENST00000470238 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
SCYL3-205ENST00000470238 PTPRCP08575 1304 aa18.79■□□□□ 0.6
SCYL3-205ENST00000470238 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
SCYL3-205ENST00000470238 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
SCYL3-205ENST00000470238 RBM19Q9Y4C8 960 aaKnown RBP18.79■□□□□ 0.6
SCYL3-205ENST00000470238 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
SCYL3-205ENST00000470238 MEGF6O75095 1541 aa18.78■□□□□ 0.6
SCYL3-205ENST00000470238 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
SCYL3-205ENST00000470238 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
SCYL3-205ENST00000470238 STK31Q9BXU1 1019 aa18.77■□□□□ 0.6
SCYL3-205ENST00000470238 WDR17Q8IZU2 1322 aa18.77■□□□□ 0.6
SCYL3-205ENST00000470238 ADAMTS7Q9UKP4 1686 aa18.77■□□□□ 0.59
SCYL3-205ENST00000470238 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.59
SCYL3-205ENST00000470238 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
SCYL3-205ENST00000470238 CHMP4AQ9BY43 222 aa18.76■□□□□ 0.59
SCYL3-205ENST00000470238 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
SCYL3-205ENST00000470238 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
SCYL3-205ENST00000470238 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
SCYL3-205ENST00000470238 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
SCYL3-205ENST00000470238 HOXB7P09629 217 aa18.74■□□□□ 0.59
SCYL3-205ENST00000470238 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
SCYL3-205ENST00000470238 RGS12O14924 1447 aa18.73■□□□□ 0.59
SCYL3-205ENST00000470238 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms