RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CDCA7Q9BWT1 371 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-208ENST00000470170 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
COL11A1-208ENST00000470170 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
COL11A1-208ENST00000470170 MEN1O00255 615 aa12□□□□□ -0.49
COL11A1-208ENST00000470170 INSM1Q01101 510 aaPredicted RBP12□□□□□ -0.49
COL11A1-208ENST00000470170 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
COL11A1-208ENST00000470170 A0A1W2PRU2 124 aa11.99□□□□□ -0.49
COL11A1-208ENST00000470170 CYP2U1Q7Z449 544 aa11.99□□□□□ -0.49
COL11A1-208ENST00000470170 SLC35F4A4IF30 521 aa11.98□□□□□ -0.49
COL11A1-208ENST00000470170 TRAK2O60296 914 aa11.98□□□□□ -0.49
COL11A1-208ENST00000470170 WASHC4Q2M389 1173 aa11.98□□□□□ -0.49
COL11A1-208ENST00000470170 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
COL11A1-208ENST00000470170 ESF1Q9H501 851 aaKnown RBP11.98□□□□□ -0.49
COL11A1-208ENST00000470170 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-208ENST00000470170 SLFNL1Q499Z3 407 aa11.97□□□□□ -0.49
COL11A1-208ENST00000470170 LYSMD3Q7Z3D4 306 aa11.97□□□□□ -0.49
COL11A1-208ENST00000470170 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
COL11A1-208ENST00000470170 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
COL11A1-208ENST00000470170 ARHGEF10LQ9HCE6 1279 aa11.97□□□□□ -0.49
COL11A1-208ENST00000470170 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.49
COL11A1-208ENST00000470170 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.49
COL11A1-208ENST00000470170 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
COL11A1-208ENST00000470170 RNF135Q8IUD6 432 aa11.95□□□□□ -0.5
COL11A1-208ENST00000470170 DOLKQ9UPQ8 538 aa11.95□□□□□ -0.5
COL11A1-208ENST00000470170 RHOQP17081 205 aa11.94□□□□□ -0.5
COL11A1-208ENST00000470170 NLRP3Q96P20 1036 aa11.94□□□□□ -0.5
COL11A1-208ENST00000470170 MYCP01106 439 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-208ENST00000470170 ITGA6P23229 1130 aa11.93□□□□□ -0.5
COL11A1-208ENST00000470170 CLN3Q13286 438 aa11.93□□□□□ -0.5
COL11A1-208ENST00000470170 GPC1P35052 558 aa11.92□□□□□ -0.5
COL11A1-208ENST00000470170 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
COL11A1-208ENST00000470170 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
COL11A1-208ENST00000470170 GPR161Q8N6U8 529 aaKnown RBP11.92□□□□□ -0.5
COL11A1-208ENST00000470170 LORP23490 312 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-208ENST00000470170 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
COL11A1-208ENST00000470170 GNRH1P01148 92 aa11.9□□□□□ -0.5
COL11A1-208ENST00000470170 FLIIQ13045 1269 aa11.9□□□□□ -0.5
COL11A1-208ENST00000470170 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
COL11A1-208ENST00000470170 STK17AQ9UEE5 414 aa11.9□□□□□ -0.5
COL11A1-208ENST00000470170 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
COL11A1-208ENST00000470170 CDC14CA4D256 554 aa11.89□□□□□ -0.51
COL11A1-208ENST00000470170 IL2RAP01589 272 aa11.89□□□□□ -0.51
COL11A1-208ENST00000470170 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
COL11A1-208ENST00000470170 ZSCAN1Q8NBB4 408 aa11.89□□□□□ -0.51
COL11A1-208ENST00000470170 NANOS1Q8WY41 292 aaKnown RBP11.89□□□□□ -0.51
COL11A1-208ENST00000470170 RAD21O60216 631 aa11.88□□□□□ -0.51
COL11A1-208ENST00000470170 SOX11P35716 441 aa11.88□□□□□ -0.51
COL11A1-208ENST00000470170 VWA5B2Q8N398 1253 aa11.88□□□□□ -0.51
COL11A1-208ENST00000470170 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
COL11A1-208ENST00000470170 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
COL11A1-208ENST00000470170 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
COL11A1-208ENST00000470170 KRT76Q01546 638 aa11.87□□□□□ -0.51
COL11A1-208ENST00000470170 POU4F2Q12837 409 aa11.87□□□□□ -0.51
COL11A1-208ENST00000470170 USP4Q13107 963 aa11.87□□□□□ -0.51
COL11A1-208ENST00000470170 CUEDC1Q9NWM3 386 aaPredicted RBP11.87□□□□□ -0.51
COL11A1-208ENST00000470170 PIK3CDO00329 1044 aa11.86□□□□□ -0.51
COL11A1-208ENST00000470170 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
COL11A1-208ENST00000470170 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
COL11A1-208ENST00000470170 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
COL11A1-208ENST00000470170 CENPCQ03188 943 aa11.84□□□□□ -0.51
COL11A1-208ENST00000470170 SV2AQ7L0J3 742 aa11.84□□□□□ -0.51
COL11A1-208ENST00000470170 CNTNAP3BQ96NU0 1288 aa11.84□□□□□ -0.51
COL11A1-208ENST00000470170 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-208ENST00000470170 CNTNAP3Q9BZ76 1288 aa11.84□□□□□ -0.51
COL11A1-208ENST00000470170 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
COL11A1-208ENST00000470170 NBPF15Q8N660 670 aa11.83□□□□□ -0.52
COL11A1-208ENST00000470170 ALG2Q9H553 416 aa11.83□□□□□ -0.52
COL11A1-208ENST00000470170 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 SPATA31C2B4DYI2 1134 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 ETNK1Q9HBU6 452 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 HRH3Q9Y5N1 445 aa11.82□□□□□ -0.52
COL11A1-208ENST00000470170 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
COL11A1-208ENST00000470170 WASLO00401 505 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-208ENST00000470170 RIPOR1Q6ZS17 1223 aa11.8□□□□□ -0.52
COL11A1-208ENST00000470170 TAS1R3Q7RTX0 852 aa11.8□□□□□ -0.52
COL11A1-208ENST00000470170 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-208ENST00000470170 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-208ENST00000470170 DYRK1BQ9Y463 629 aa11.8□□□□□ -0.52
COL11A1-208ENST00000470170 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-208ENST00000470170 SKIP12755 728 aa11.78□□□□□ -0.52
COL11A1-208ENST00000470170 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
COL11A1-208ENST00000470170 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
COL11A1-208ENST00000470170 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-208ENST00000470170 TIMMDC1Q9NPL8 285 aa11.78□□□□□ -0.52
COL11A1-208ENST00000470170 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
COL11A1-208ENST00000470170 PHKA2P46019 1235 aa11.77□□□□□ -0.53
COL11A1-208ENST00000470170 SCNN1DP51172 638 aa11.77□□□□□ -0.53
COL11A1-208ENST00000470170 TRIM22Q8IYM9 498 aa11.77□□□□□ -0.53
COL11A1-208ENST00000470170 GDF10P55107 478 aa11.76□□□□□ -0.53
COL11A1-208ENST00000470170 TLR1Q15399 786 aa11.76□□□□□ -0.53
COL11A1-208ENST00000470170 DBN1Q16643 649 aa11.76□□□□□ -0.53
COL11A1-208ENST00000470170 WDR44Q5JSH3 913 aa11.76□□□□□ -0.53
COL11A1-208ENST00000470170 TMEM214Q6NUQ4 689 aaKnown RBP11.75□□□□□ -0.53
COL11A1-208ENST00000470170 GPR25O00155 361 aa11.74□□□□□ -0.53
COL11A1-208ENST00000470170 EML3Q32P44 896 aa11.74□□□□□ -0.53
COL11A1-208ENST00000470170 INHAP05111 366 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms