RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ZNF827Q17R98 1081 aa18.68■□□□□ 0.58
LINC00173-201ENST00000470091 NBPF6Q5VWK0 638 aa18.68■□□□□ 0.58
LINC00173-201ENST00000470091 NBPF4Q96M43 638 aa18.68■□□□□ 0.58
LINC00173-201ENST00000470091 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
LINC00173-201ENST00000470091 CASZ1Q86V15 1759 aa18.67■□□□□ 0.58
LINC00173-201ENST00000470091 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
LINC00173-201ENST00000470091 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
LINC00173-201ENST00000470091 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
LINC00173-201ENST00000470091 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
LINC00173-201ENST00000470091 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
LINC00173-201ENST00000470091 BTAF1O14981 1849 aa18.64■□□□□ 0.57
LINC00173-201ENST00000470091 UTRNP46939 3433 aa18.64■□□□□ 0.57
LINC00173-201ENST00000470091 SLC27A3Q5K4L6 730 aa18.63■□□□□ 0.57
LINC00173-201ENST00000470091 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
LINC00173-201ENST00000470091 ARXQ96QS3 562 aa18.63■□□□□ 0.57
LINC00173-201ENST00000470091 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
LINC00173-201ENST00000470091 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
LINC00173-201ENST00000470091 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
LINC00173-201ENST00000470091 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
LINC00173-201ENST00000470091 PPM1GO15355 546 aaPredicted RBP18.61■□□□□ 0.57
LINC00173-201ENST00000470091 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
LINC00173-201ENST00000470091 MYOM1P52179 1685 aa18.6■□□□□ 0.57
LINC00173-201ENST00000470091 MEGF6O75095 1541 aa18.6■□□□□ 0.57
LINC00173-201ENST00000470091 KLHL34Q8N239 644 aa18.6■□□□□ 0.57
LINC00173-201ENST00000470091 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
LINC00173-201ENST00000470091 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
LINC00173-201ENST00000470091 MIER1Q8N108 512 aa18.59■□□□□ 0.57
LINC00173-201ENST00000470091 MSH5O43196 834 aa18.58■□□□□ 0.56
LINC00173-201ENST00000470091 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
LINC00173-201ENST00000470091 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
LINC00173-201ENST00000470091 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
LINC00173-201ENST00000470091 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
LINC00173-201ENST00000470091 INSRP06213 1382 aa18.56■□□□□ 0.56
LINC00173-201ENST00000470091 CGNL1Q0VF96 1302 aa18.56■□□□□ 0.56
LINC00173-201ENST00000470091 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
LINC00173-201ENST00000470091 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
LINC00173-201ENST00000470091 NSD2O96028 1365 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 POLD1P28340 1107 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 PAPPAQ13219 1627 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 FLT4P35916 1363 aa18.55■□□□□ 0.56
LINC00173-201ENST00000470091 GPR162Q16538 588 aa18.53■□□□□ 0.56
LINC00173-201ENST00000470091 CYP27B1O15528 508 aa18.52■□□□□ 0.56
LINC00173-201ENST00000470091 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
LINC00173-201ENST00000470091 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
LINC00173-201ENST00000470091 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.55
LINC00173-201ENST00000470091 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.55
LINC00173-201ENST00000470091 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
LINC00173-201ENST00000470091 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
LINC00173-201ENST00000470091 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
LINC00173-201ENST00000470091 MSL1Q68DK7 614 aa18.49■□□□□ 0.55
LINC00173-201ENST00000470091 KIF24Q5T7B8 1368 aa18.49■□□□□ 0.55
LINC00173-201ENST00000470091 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
LINC00173-201ENST00000470091 ZNF784Q8NCA9 323 aaPredicted RBP18.48■□□□□ 0.55
LINC00173-201ENST00000470091 EYA1Q99502 592 aa18.48■□□□□ 0.55
LINC00173-201ENST00000470091 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
LINC00173-201ENST00000470091 KIF20BQ96Q89 1820 aa18.48■□□□□ 0.55
LINC00173-201ENST00000470091 ANP32CO43423 234 aa18.47■□□□□ 0.55
LINC00173-201ENST00000470091 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
LINC00173-201ENST00000470091 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
LINC00173-201ENST00000470091 MAP3K5Q99683 1374 aa18.46■□□□□ 0.55
LINC00173-201ENST00000470091 PIGBQ92521 554 aa18.46■□□□□ 0.55
LINC00173-201ENST00000470091 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
LINC00173-201ENST00000470091 LY75O60449 1722 aa18.44■□□□□ 0.54
LINC00173-201ENST00000470091 SMIM5Q71RC9 77 aa18.44■□□□□ 0.54
LINC00173-201ENST00000470091 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
LINC00173-201ENST00000470091 PANK3Q9H999 370 aa18.43■□□□□ 0.54
LINC00173-201ENST00000470091 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
LINC00173-201ENST00000470091 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
LINC00173-201ENST00000470091 AK7Q96M32 723 aa18.42■□□□□ 0.54
LINC00173-201ENST00000470091 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
LINC00173-201ENST00000470091 PHF14O94880 888 aa18.41■□□□□ 0.54
LINC00173-201ENST00000470091 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
LINC00173-201ENST00000470091 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
LINC00173-201ENST00000470091 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
LINC00173-201ENST00000470091 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
LINC00173-201ENST00000470091 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
LINC00173-201ENST00000470091 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
LINC00173-201ENST00000470091 PHKG2P15735 406 aa18.39■□□□□ 0.53
LINC00173-201ENST00000470091 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
LINC00173-201ENST00000470091 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
LINC00173-201ENST00000470091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00173-201ENST00000470091 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
LINC00173-201ENST00000470091 SIK1P57059 783 aa18.38■□□□□ 0.53
LINC00173-201ENST00000470091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
LINC00173-201ENST00000470091 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00173-201ENST00000470091 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
LINC00173-201ENST00000470091 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
LINC00173-201ENST00000470091 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
LINC00173-201ENST00000470091 NCAPD2Q15021 1401 aa18.36■□□□□ 0.53
LINC00173-201ENST00000470091 CHD4Q14839 1912 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
LINC00173-201ENST00000470091 ATP6V1AP38606 617 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 ITGB4P16144 1822 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
LINC00173-201ENST00000470091 ITPK1Q13572 414 aa18.34■□□□□ 0.53
LINC00173-201ENST00000470091 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms