RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
LSM2-210ENST00000470086 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
LSM2-210ENST00000470086 KCNQ4P56696 695 aa12.27□□□□□ -0.45
LSM2-210ENST00000470086 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
LSM2-210ENST00000470086 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.45
LSM2-210ENST00000470086 CDK19Q9BWU1 502 aa12.27□□□□□ -0.45
LSM2-210ENST00000470086 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
LSM2-210ENST00000470086 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
LSM2-210ENST00000470086 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
LSM2-210ENST00000470086 NSD2O96028 1365 aa12.25□□□□□ -0.45
LSM2-210ENST00000470086 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
LSM2-210ENST00000470086 ITGB4P16144 1822 aa12.23□□□□□ -0.45
LSM2-210ENST00000470086 KIF3CO14782 793 aa12.22□□□□□ -0.45
LSM2-210ENST00000470086 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
LSM2-210ENST00000470086 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
LSM2-210ENST00000470086 NLRP13Q86W25 1043 aa12.21□□□□□ -0.45
LSM2-210ENST00000470086 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
LSM2-210ENST00000470086 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 MSL1Q68DK7 614 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
LSM2-210ENST00000470086 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
LSM2-210ENST00000470086 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
LSM2-210ENST00000470086 SOX12O15370 315 aa12.19□□□□□ -0.46
LSM2-210ENST00000470086 HTRA3P83110 453 aa12.19□□□□□ -0.46
LSM2-210ENST00000470086 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
LSM2-210ENST00000470086 NLRP6P59044 892 aa12.18□□□□□ -0.46
LSM2-210ENST00000470086 POTEHQ6S545 545 aa12.18□□□□□ -0.46
LSM2-210ENST00000470086 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
LSM2-210ENST00000470086 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
LSM2-210ENST00000470086 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
LSM2-210ENST00000470086 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
LSM2-210ENST00000470086 AMIGO3Q86WK7 504 aa12.16□□□□□ -0.46
LSM2-210ENST00000470086 ERBB3P21860 1342 aa12.15□□□□□ -0.46
LSM2-210ENST00000470086 EXOC5O00471 708 aa12.15□□□□□ -0.46
LSM2-210ENST00000470086 POLD1P28340 1107 aa12.15□□□□□ -0.46
LSM2-210ENST00000470086 CDCA7Q9BWT1 371 aaPredicted RBP12.15□□□□□ -0.46
LSM2-210ENST00000470086 TNRC6CQ9HCJ0 1690 aaKnown RBP12.15□□□□□ -0.46
LSM2-210ENST00000470086 SBF1O95248 1867 aa12.14□□□□□ -0.47
LSM2-210ENST00000470086 COL23A1Q86Y22 540 aaPredicted RBP12.14□□□□□ -0.47
LSM2-210ENST00000470086 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
LSM2-210ENST00000470086 MEGF6O75095 1541 aa12.14□□□□□ -0.47
LSM2-210ENST00000470086 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
LSM2-210ENST00000470086 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
LSM2-210ENST00000470086 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
LSM2-210ENST00000470086 GRIN3BO60391 1043 aa12.12□□□□□ -0.47
LSM2-210ENST00000470086 NBPF1Q3BBV0 1214 aa12.12□□□□□ -0.47
LSM2-210ENST00000470086 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
LSM2-210ENST00000470086 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
LSM2-210ENST00000470086 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
LSM2-210ENST00000470086 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
LSM2-210ENST00000470086 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
LSM2-210ENST00000470086 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
LSM2-210ENST00000470086 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
LSM2-210ENST00000470086 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
LSM2-210ENST00000470086 PXDNLA1KZ92 1463 aa12.1□□□□□ -0.47
LSM2-210ENST00000470086 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
LSM2-210ENST00000470086 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
LSM2-210ENST00000470086 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
LSM2-210ENST00000470086 CCDC88AQ3V6T2 1871 aa12.09□□□□□ -0.47
LSM2-210ENST00000470086 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
LSM2-210ENST00000470086 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
LSM2-210ENST00000470086 IL2RBP14784 551 aa12.08□□□□□ -0.48
LSM2-210ENST00000470086 APLP1P51693 650 aa12.08□□□□□ -0.48
LSM2-210ENST00000470086 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
LSM2-210ENST00000470086 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
LSM2-210ENST00000470086 CENPJQ9HC77 1338 aaPredicted RBP12.08□□□□□ -0.48
LSM2-210ENST00000470086 PRELPP51888 382 aa12.07□□□□□ -0.48
LSM2-210ENST00000470086 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
LSM2-210ENST00000470086 JMYQ8N9B5 988 aa12.06□□□□□ -0.48
LSM2-210ENST00000470086 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
LSM2-210ENST00000470086 SLC34A2O95436 690 aa12.05□□□□□ -0.48
LSM2-210ENST00000470086 FKBP8Q14318 412 aa12.05□□□□□ -0.48
LSM2-210ENST00000470086 TNS4Q8IZW8 715 aa12.05□□□□□ -0.48
LSM2-210ENST00000470086 KLRG1Q96E93 195 aa12.05□□□□□ -0.48
LSM2-210ENST00000470086 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
LSM2-210ENST00000470086 ANKRD24Q8TF21 1146 aa12.04□□□□□ -0.48
LSM2-210ENST00000470086 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
LSM2-210ENST00000470086 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
LSM2-210ENST00000470086 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
LSM2-210ENST00000470086 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
LSM2-210ENST00000470086 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
LSM2-210ENST00000470086 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
LSM2-210ENST00000470086 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
LSM2-210ENST00000470086 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.48
LSM2-210ENST00000470086 NME9Q86XW9 330 aa12.02□□□□□ -0.49
LSM2-210ENST00000470086 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
LSM2-210ENST00000470086 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
LSM2-210ENST00000470086 TOMM70O94826 608 aa12.01□□□□□ -0.49
LSM2-210ENST00000470086 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
LSM2-210ENST00000470086 MYH14Q7Z406 1995 aaKnown RBP12.01□□□□□ -0.49
LSM2-210ENST00000470086 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
LSM2-210ENST00000470086 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
LSM2-210ENST00000470086 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
LSM2-210ENST00000470086 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
LSM2-210ENST00000470086 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
LSM2-210ENST00000470086 AFDNP55196 1824 aaKnown RBP11.99□□□□□ -0.49
LSM2-210ENST00000470086 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms