RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ZNF853P0CG23 659 aa8.72□□□□□ -1.01
GAPVD1-215ENST00000470056 TRIM27P14373 513 aa8.72□□□□□ -1.01
GAPVD1-215ENST00000470056 MSNP26038 577 aaKnown RBP8.71□□□□□ -1.01
GAPVD1-215ENST00000470056 NPHP3Q7Z494 1330 aa8.71□□□□□ -1.01
GAPVD1-215ENST00000470056 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-215ENST00000470056 DCCP43146 1447 aa8.71□□□□□ -1.02
GAPVD1-215ENST00000470056 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
GAPVD1-215ENST00000470056 NRKQ7Z2Y5 1582 aa8.71□□□□□ -1.02
GAPVD1-215ENST00000470056 KRT28Q7Z3Y7 464 aa8.71□□□□□ -1.02
GAPVD1-215ENST00000470056 PTPRCP08575 1304 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 EYA1Q99502 592 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 HMMRO75330 724 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 BACH2Q9BYV9 841 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 HDAC5Q9UQL6 1122 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 VAMP4O75379 141 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 KDRP35968 1356 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 TEFQ10587 303 aa8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 HDAC1Q13547 482 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-215ENST00000470056 CHL1O00533 1208 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 FOXO3O43524 673 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 MAP3K5Q99683 1374 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 THUMPD2Q9BTF0 503 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 ELL2O00472 640 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 GCC1Q96CN9 775 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
GAPVD1-215ENST00000470056 MCM10Q7L590 875 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 GBP4Q96PP9 640 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 MTHFSDQ2M296 383 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 TMEM57Q8N5G2 664 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 TMEM94Q12767 1356 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 CCT4P50991 539 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 TAF7Q15545 349 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 ZRSR1Q15695 479 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 GCP02774 474 aa8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 DNTTIP2Q5QJE6 756 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-215ENST00000470056 NWD1Q149M9 1564 aa8.67□□□□□ -1.02
GAPVD1-215ENST00000470056 FAM83GA6ND36 823 aa8.67□□□□□ -1.02
GAPVD1-215ENST00000470056 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
GAPVD1-215ENST00000470056 HSCBQ8IWL3 235 aa8.67□□□□□ -1.02
GAPVD1-215ENST00000470056 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-215ENST00000470056 RLBP1P12271 317 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 HOXB7P09629 217 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 AKAP4Q5JQC9 854 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
GAPVD1-215ENST00000470056 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 KIF1AQ12756 1690 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 SLC4A2P04920 1241 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 GNAI3P08754 354 aa8.65□□□□□ -1.02
GAPVD1-215ENST00000470056 ABCC4O15439 1325 aa8.65□□□□□ -1.03
GAPVD1-215ENST00000470056 NCAPD2Q15021 1401 aa8.65□□□□□ -1.03
GAPVD1-215ENST00000470056 NALCNQ8IZF0 1738 aa8.65□□□□□ -1.03
GAPVD1-215ENST00000470056 SYAP1Q96A49 352 aaPredicted RBP8.65□□□□□ -1.03
GAPVD1-215ENST00000470056 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.03
GAPVD1-215ENST00000470056 NLRP2Q9NX02 1062 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 MAP2P11137 1827 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 USP19O94966 1318 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 MTERF4Q7Z6M4 381 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 PLEKHG2Q9H7P9 1386 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 IGHDP01880 384 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 XPCQ01831 940 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-215ENST00000470056 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
GAPVD1-215ENST00000470056 TSPYL6Q8N831 410 aa8.63□□□□□ -1.03
GAPVD1-215ENST00000470056 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
GAPVD1-215ENST00000470056 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
GAPVD1-215ENST00000470056 INTS3Q68E01 1043 aaKnown RBP8.62□□□□□ -1.03
GAPVD1-215ENST00000470056 SMC5Q8IY18 1101 aa8.62□□□□□ -1.03
GAPVD1-215ENST00000470056 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
GAPVD1-215ENST00000470056 SLC4A10Q6U841 1118 aa8.62□□□□□ -1.03
GAPVD1-215ENST00000470056 CRB1P82279 1406 aa8.62□□□□□ -1.03
GAPVD1-215ENST00000470056 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 DDX58O95786 925 aaKnown RBP8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 HSP90AA2PQ14568 343 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 TTC5Q8N0Z6 440 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.039e-7■■□□□ 13.5
GAPVD1-215ENST00000470056 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 USHBP1Q8N6Y0 703 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 HSPA2P54652 639 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 MST1RQ04912 1400 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms