RNA–Protein interactions for RNA: ENST00000470027.7

PAX6-214, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 3,587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-214ENST00000470027 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
PAX6-214ENST00000470027 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
PAX6-214ENST00000470027 IGHDP01880 384 aa11.63□□□□□ -0.55
PAX6-214ENST00000470027 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
PAX6-214ENST00000470027 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
PAX6-214ENST00000470027 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
PAX6-214ENST00000470027 USP31Q70CQ4 1352 aa11.62□□□□□ -0.55
PAX6-214ENST00000470027 SEC24BO95487 1268 aa11.62□□□□□ -0.55
PAX6-214ENST00000470027 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
PAX6-214ENST00000470027 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
PAX6-214ENST00000470027 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
PAX6-214ENST00000470027 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
PAX6-214ENST00000470027 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
PAX6-214ENST00000470027 HSP90AA1P07900 732 aaKnown RBP11.62□□□□□ -0.55
PAX6-214ENST00000470027 KIF1AQ12756 1690 aa11.61□□□□□ -0.55
PAX6-214ENST00000470027 CRYBG1Q9Y4K1 1723 aa11.61□□□□□ -0.55
PAX6-214ENST00000470027 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
PAX6-214ENST00000470027 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
PAX6-214ENST00000470027 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
PAX6-214ENST00000470027 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
PAX6-214ENST00000470027 FGD1P98174 961 aa11.6□□□□□ -0.55
PAX6-214ENST00000470027 PDIA4P13667 645 aaKnown RBP11.6□□□□□ -0.55
PAX6-214ENST00000470027 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
PAX6-214ENST00000470027 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
PAX6-214ENST00000470027 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
PAX6-214ENST00000470027 E9PSI1 815 aa11.59□□□□□ -0.55
PAX6-214ENST00000470027 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
PAX6-214ENST00000470027 TNNQ9UQP3 1299 aa11.59□□□□□ -0.55
PAX6-214ENST00000470027 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
PAX6-214ENST00000470027 TRMT2AQ8IZ69 625 aaKnown RBP11.59□□□□□ -0.55
PAX6-214ENST00000470027 NFAT5O94916 1531 aa11.59□□□□□ -0.55
PAX6-214ENST00000470027 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
PAX6-214ENST00000470027 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
PAX6-214ENST00000470027 RGPD5Q99666 1765 aa11.58□□□□□ -0.56
PAX6-214ENST00000470027 ANXA1P04083 346 aa11.58□□□□□ -0.56
PAX6-214ENST00000470027 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
PAX6-214ENST00000470027 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
PAX6-214ENST00000470027 TEFQ10587 303 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 MYH16Q9H6N6 1097 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 AIMP1Q12904 312 aaKnown RBP11.57□□□□□ -0.56
PAX6-214ENST00000470027 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 MAP3K19Q56UN5 1328 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
PAX6-214ENST00000470027 MST1RQ04912 1400 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 TTC21AQ8NDW8 1320 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
PAX6-214ENST00000470027 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 IL13P35225 146 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
PAX6-214ENST00000470027 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
PAX6-214ENST00000470027 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 PANK2Q9BZ23 570 aa11.56□□□□□ -0.56
PAX6-214ENST00000470027 NCOA3Q9Y6Q9 1424 aa11.55□□□□□ -0.56
PAX6-214ENST00000470027 AAMPQ13685 434 aa11.55□□□□□ -0.56
PAX6-214ENST00000470027 ZNF530Q6P9A1 599 aaPredicted RBP11.55□□□□□ -0.56
PAX6-214ENST00000470027 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
PAX6-214ENST00000470027 VIRMAQ69YN4 1812 aaKnown RBP11.55□□□□□ -0.56
PAX6-214ENST00000470027 DCCP43146 1447 aa11.55□□□□□ -0.56
PAX6-214ENST00000470027 TRAK2O60296 914 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
PAX6-214ENST00000470027 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 SLIT3O75094 1523 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
PAX6-214ENST00000470027 PTCD1O75127 700 aaKnown RBP11.54□□□□□ -0.56
PAX6-214ENST00000470027 GCP02774 474 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 MCM4P33991 863 aa11.54□□□□□ -0.56
PAX6-214ENST00000470027 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
PAX6-214ENST00000470027 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
PAX6-214ENST00000470027 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
PAX6-214ENST00000470027 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
PAX6-214ENST00000470027 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
PAX6-214ENST00000470027 CHMP5Q9NZZ3 219 aa11.52□□□□□ -0.56
PAX6-214ENST00000470027 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
PAX6-214ENST00000470027 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
PAX6-214ENST00000470027 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
PAX6-214ENST00000470027 CAMTA1Q9Y6Y1 1673 aa11.52□□□□□ -0.57
PAX6-214ENST00000470027 EYA1Q99502 592 aa11.52□□□□□ -0.57
PAX6-214ENST00000470027 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
PAX6-214ENST00000470027 COL18A1P39060 1754 aa11.52□□□□□ -0.57
PAX6-214ENST00000470027 SLC39A6Q13433 755 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 CCDC27Q2M243 656 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 ABCA3Q99758 1704 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
PAX6-214ENST00000470027 FAM182BQ5T319 152 aa11.51□□□□□ -0.57
PAX6-214ENST00000470027 MSH6P52701 1360 aa11.5□□□□□ -0.57
PAX6-214ENST00000470027 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
PAX6-214ENST00000470027 ANKRD24Q8TF21 1146 aa11.5□□□□□ -0.57
PAX6-214ENST00000470027 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
PAX6-214ENST00000470027 MRE11P49959 708 aa11.5□□□□□ -0.57
PAX6-214ENST00000470027 PXDNQ92626 1479 aa11.5□□□□□ -0.57
PAX6-214ENST00000470027 SRCAPQ6ZRS2 3230 aa11.49□□□□□ -0.57
PAX6-214ENST00000470027 USP19O94966 1318 aa11.49□□□□□ -0.57
PAX6-214ENST00000470027 NHSL1Q5SYE7 1610 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms