RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 BCL9O00512 1426 aa12.75□□□□□ -0.37
SHROOM3-203ENST00000469923 NSD2O96028 1365 aa12.75□□□□□ -0.37
SHROOM3-203ENST00000469923 INSRP06213 1382 aa12.75□□□□□ -0.37
SHROOM3-203ENST00000469923 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
SHROOM3-203ENST00000469923 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
SHROOM3-203ENST00000469923 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
SHROOM3-203ENST00000469923 WASHC2AQ641Q2 1341 aa12.73□□□□□ -0.37
SHROOM3-203ENST00000469923 PTGER2P43116 358 aa12.73□□□□□ -0.37
SHROOM3-203ENST00000469923 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
SHROOM3-203ENST00000469923 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
SHROOM3-203ENST00000469923 UTRNP46939 3433 aa12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 RREB1Q92766 1687 aa12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 ABCC6O95255 1503 aa12.72□□□□□ -0.37
SHROOM3-203ENST00000469923 FLT4P35916 1363 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 MPRIPQ6WCQ1 1025 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 MORC1Q86VD1 984 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
SHROOM3-203ENST00000469923 PIGBQ92521 554 aa12.7□□□□□ -0.38
SHROOM3-203ENST00000469923 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
SHROOM3-203ENST00000469923 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
SHROOM3-203ENST00000469923 CC2D1BQ5T0F9 858 aaKnown RBP12.69□□□□□ -0.38
SHROOM3-203ENST00000469923 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
SHROOM3-203ENST00000469923 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
SHROOM3-203ENST00000469923 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
SHROOM3-203ENST00000469923 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
SHROOM3-203ENST00000469923 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
SHROOM3-203ENST00000469923 BTAF1O14981 1849 aa12.67□□□□□ -0.38
SHROOM3-203ENST00000469923 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
SHROOM3-203ENST00000469923 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SHROOM3-203ENST00000469923 IL13P35225 146 aa12.66□□□□□ -0.38
SHROOM3-203ENST00000469923 KNSTRNQ9Y448 316 aa12.66□□□□□ -0.38
SHROOM3-203ENST00000469923 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 PHKG2P15735 406 aa12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 MTHFSP49914 203 aa12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-203ENST00000469923 LRP5O75197 1615 aa12.64□□□□□ -0.39
SHROOM3-203ENST00000469923 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
SHROOM3-203ENST00000469923 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
SHROOM3-203ENST00000469923 NCAPD2Q15021 1401 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 HMOX1P09601 288 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 ITPK1Q13572 414 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 ATG3Q9NT62 314 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
SHROOM3-203ENST00000469923 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
SHROOM3-203ENST00000469923 CASZ1Q86V15 1759 aa12.62□□□□□ -0.39
SHROOM3-203ENST00000469923 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
SHROOM3-203ENST00000469923 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
SHROOM3-203ENST00000469923 TOGARAM1Q9Y4F4 1720 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 PAPPAQ13219 1627 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 MSH5O43196 834 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 SYT17Q9BSW7 474 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
SHROOM3-203ENST00000469923 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
SHROOM3-203ENST00000469923 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
SHROOM3-203ENST00000469923 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
SHROOM3-203ENST00000469923 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
SHROOM3-203ENST00000469923 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
SHROOM3-203ENST00000469923 ARXQ96QS3 562 aa12.58□□□□□ -0.4
SHROOM3-203ENST00000469923 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 PHF14O94880 888 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 SIK1P57059 783 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
SHROOM3-203ENST00000469923 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
SHROOM3-203ENST00000469923 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
SHROOM3-203ENST00000469923 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
SHROOM3-203ENST00000469923 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
SHROOM3-203ENST00000469923 ITGB4P16144 1822 aa12.55□□□□□ -0.4
SHROOM3-203ENST00000469923 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
SHROOM3-203ENST00000469923 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
SHROOM3-203ENST00000469923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
SHROOM3-203ENST00000469923 LY75O60449 1722 aa12.53□□□□□ -0.4
SHROOM3-203ENST00000469923 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms