RNA–Protein interactions for RNA: ENST00000469772.5

GTF2E1-202, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 5

Gene GTF2E1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-202ENST00000469772 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
GTF2E1-202ENST00000469772 BRWD3Q6RI45 1802 aa17.44■□□□□ 0.38
GTF2E1-202ENST00000469772 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
GTF2E1-202ENST00000469772 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
GTF2E1-202ENST00000469772 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
GTF2E1-202ENST00000469772 PCDH11XQ9BZA7 1347 aa17.43■□□□□ 0.38
GTF2E1-202ENST00000469772 PCDH11YQ9BZA8 1340 aa17.43■□□□□ 0.38
GTF2E1-202ENST00000469772 KDRP35968 1356 aa17.42■□□□□ 0.38
GTF2E1-202ENST00000469772 BCL9O00512 1426 aa17.42■□□□□ 0.38
GTF2E1-202ENST00000469772 NEFMP07197 916 aa17.42■□□□□ 0.38
GTF2E1-202ENST00000469772 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
GTF2E1-202ENST00000469772 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
GTF2E1-202ENST00000469772 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
GTF2E1-202ENST00000469772 SOCS7O14512 581 aa17.41■□□□□ 0.38
GTF2E1-202ENST00000469772 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
GTF2E1-202ENST00000469772 MEGF6O75095 1541 aa17.41■□□□□ 0.38
GTF2E1-202ENST00000469772 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
GTF2E1-202ENST00000469772 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
GTF2E1-202ENST00000469772 FCHSD2O94868 740 aa17.38■□□□□ 0.37
GTF2E1-202ENST00000469772 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
GTF2E1-202ENST00000469772 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
GTF2E1-202ENST00000469772 MARCH10Q8NA82 808 aaPredicted RBP17.37■□□□□ 0.37
GTF2E1-202ENST00000469772 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
GTF2E1-202ENST00000469772 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
GTF2E1-202ENST00000469772 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
GTF2E1-202ENST00000469772 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
GTF2E1-202ENST00000469772 HMOX1P09601 288 aa17.35■□□□□ 0.37
GTF2E1-202ENST00000469772 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
GTF2E1-202ENST00000469772 GAS2L2Q8NHY3 880 aa17.34■□□□□ 0.37
GTF2E1-202ENST00000469772 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
GTF2E1-202ENST00000469772 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
GTF2E1-202ENST00000469772 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
GTF2E1-202ENST00000469772 BAG6P46379 1132 aa17.32■□□□□ 0.36
GTF2E1-202ENST00000469772 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
GTF2E1-202ENST00000469772 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
GTF2E1-202ENST00000469772 PHKG2P15735 406 aa17.31■□□□□ 0.36
GTF2E1-202ENST00000469772 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
GTF2E1-202ENST00000469772 TRIM37O94972 964 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
GTF2E1-202ENST00000469772 CYP27B1O15528 508 aa17.29■□□□□ 0.36
GTF2E1-202ENST00000469772 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
GTF2E1-202ENST00000469772 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
GTF2E1-202ENST00000469772 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
GTF2E1-202ENST00000469772 SBF2Q86WG5 1849 aa17.26■□□□□ 0.35
GTF2E1-202ENST00000469772 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
GTF2E1-202ENST00000469772 APBA3O96018 575 aa17.26■□□□□ 0.35
GTF2E1-202ENST00000469772 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
GTF2E1-202ENST00000469772 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
GTF2E1-202ENST00000469772 MSH5O43196 834 aa17.25■□□□□ 0.35
GTF2E1-202ENST00000469772 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
GTF2E1-202ENST00000469772 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
GTF2E1-202ENST00000469772 PLSCR1O15162 318 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
GTF2E1-202ENST00000469772 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
GTF2E1-202ENST00000469772 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
GTF2E1-202ENST00000469772 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
GTF2E1-202ENST00000469772 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
GTF2E1-202ENST00000469772 CABP4P57796 275 aa17.22■□□□□ 0.35
GTF2E1-202ENST00000469772 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
GTF2E1-202ENST00000469772 RGPD3A6NKT7 1758 aaPredicted RBP17.22■□□□□ 0.35
GTF2E1-202ENST00000469772 RGPD4Q7Z3J3 1758 aa17.22■□□□□ 0.35
GTF2E1-202ENST00000469772 EP400Q96L91 3159 aa17.21■□□□□ 0.35
GTF2E1-202ENST00000469772 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
GTF2E1-202ENST00000469772 NFE2L2Q16236 605 aa17.2■□□□□ 0.34
GTF2E1-202ENST00000469772 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
GTF2E1-202ENST00000469772 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
GTF2E1-202ENST00000469772 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
GTF2E1-202ENST00000469772 KCNQ2O43526 872 aa17.19■□□□□ 0.34
GTF2E1-202ENST00000469772 TEFQ10587 303 aa17.19■□□□□ 0.34
GTF2E1-202ENST00000469772 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
GTF2E1-202ENST00000469772 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
GTF2E1-202ENST00000469772 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
GTF2E1-202ENST00000469772 BTAF1O14981 1849 aa17.18■□□□□ 0.34
GTF2E1-202ENST00000469772 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
GTF2E1-202ENST00000469772 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
GTF2E1-202ENST00000469772 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
GTF2E1-202ENST00000469772 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
GTF2E1-202ENST00000469772 PIGBQ92521 554 aa17.16■□□□□ 0.34
GTF2E1-202ENST00000469772 CAMKK2Q96RR4 588 aa17.16■□□□□ 0.34
GTF2E1-202ENST00000469772 ITGB4P16144 1822 aa17.16■□□□□ 0.34
GTF2E1-202ENST00000469772 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
GTF2E1-202ENST00000469772 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
GTF2E1-202ENST00000469772 ADAMTS7Q9UKP4 1686 aa17.15■□□□□ 0.34
GTF2E1-202ENST00000469772 TOGARAM1Q9Y4F4 1720 aa17.15■□□□□ 0.34
GTF2E1-202ENST00000469772 MRC1P22897 1456 aa17.14■□□□□ 0.33
GTF2E1-202ENST00000469772 RIPK4P57078 832 aa17.14■□□□□ 0.33
GTF2E1-202ENST00000469772 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
GTF2E1-202ENST00000469772 NGEFQ8N5V2 710 aa17.14■□□□□ 0.33
GTF2E1-202ENST00000469772 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms