RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 OVOS2A0A0G2JMS6 1433 aa13.71□□□□□ -0.22
THBS3-206ENST00000469769 MEGF6O75095 1541 aa13.7□□□□□ -0.22
THBS3-206ENST00000469769 NEFMP07197 916 aa13.7□□□□□ -0.22
THBS3-206ENST00000469769 MTHFSDQ2M296 383 aaKnown RBP13.7□□□□□ -0.22
THBS3-206ENST00000469769 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
THBS3-206ENST00000469769 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
THBS3-206ENST00000469769 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
THBS3-206ENST00000469769 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
THBS3-206ENST00000469769 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
THBS3-206ENST00000469769 BARGINQ6ZT62 677 aa13.69□□□□□ -0.22
THBS3-206ENST00000469769 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
THBS3-206ENST00000469769 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
THBS3-206ENST00000469769 IL2RBP14784 551 aa13.68□□□□□ -0.22
THBS3-206ENST00000469769 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
THBS3-206ENST00000469769 RIPK4P57078 832 aa13.68□□□□□ -0.22
THBS3-206ENST00000469769 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
THBS3-206ENST00000469769 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
THBS3-206ENST00000469769 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
THBS3-206ENST00000469769 USP21Q9UK80 565 aa13.68□□□□□ -0.22
THBS3-206ENST00000469769 ATRNO75882 1429 aa13.67□□□□□ -0.22
THBS3-206ENST00000469769 ADAMTS7Q9UKP4 1686 aa13.67□□□□□ -0.22
THBS3-206ENST00000469769 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
THBS3-206ENST00000469769 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
THBS3-206ENST00000469769 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
THBS3-206ENST00000469769 AFF2P51816 1311 aa13.66□□□□□ -0.22
THBS3-206ENST00000469769 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
THBS3-206ENST00000469769 TRMT2AQ8IZ69 625 aaKnown RBP13.66□□□□□ -0.22
THBS3-206ENST00000469769 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
THBS3-206ENST00000469769 IL16Q14005 1332 aa13.65□□□□□ -0.22
THBS3-206ENST00000469769 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
THBS3-206ENST00000469769 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
THBS3-206ENST00000469769 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
THBS3-206ENST00000469769 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
THBS3-206ENST00000469769 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
THBS3-206ENST00000469769 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
THBS3-206ENST00000469769 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
THBS3-206ENST00000469769 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
THBS3-206ENST00000469769 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
THBS3-206ENST00000469769 TRPC5Q9UL62 973 aaPredicted RBP13.64□□□□□ -0.23
THBS3-206ENST00000469769 GLI3P10071 1580 aa13.63□□□□□ -0.23
THBS3-206ENST00000469769 CYP27B1O15528 508 aa13.63□□□□□ -0.23
THBS3-206ENST00000469769 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
THBS3-206ENST00000469769 ZCRB1Q8TBF4 217 aaKnown RBP13.63□□□□□ -0.23
THBS3-206ENST00000469769 GJD4Q96KN9 370 aaPredicted RBP13.63□□□□□ -0.23
THBS3-206ENST00000469769 LRRC37A3O60309 1634 aa13.63□□□□□ -0.23
THBS3-206ENST00000469769 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
THBS3-206ENST00000469769 PHKG2P15735 406 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
THBS3-206ENST00000469769 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
THBS3-206ENST00000469769 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
THBS3-206ENST00000469769 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
THBS3-206ENST00000469769 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
THBS3-206ENST00000469769 CALD1Q05682 793 aaKnown RBP13.61□□□□□ -0.23
THBS3-206ENST00000469769 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
THBS3-206ENST00000469769 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
THBS3-206ENST00000469769 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
THBS3-206ENST00000469769 E9PSI1 815 aa13.6□□□□□ -0.23
THBS3-206ENST00000469769 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
THBS3-206ENST00000469769 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
THBS3-206ENST00000469769 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
THBS3-206ENST00000469769 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
THBS3-206ENST00000469769 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
THBS3-206ENST00000469769 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
THBS3-206ENST00000469769 EXOC5O00471 708 aa13.59□□□□□ -0.23
THBS3-206ENST00000469769 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
THBS3-206ENST00000469769 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
THBS3-206ENST00000469769 DUSP27Q5VZP5 1158 aa13.59□□□□□ -0.23
THBS3-206ENST00000469769 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
THBS3-206ENST00000469769 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
THBS3-206ENST00000469769 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
THBS3-206ENST00000469769 MRC1P22897 1456 aa13.59□□□□□ -0.23
THBS3-206ENST00000469769 CHL1O00533 1208 aa13.58□□□□□ -0.24
THBS3-206ENST00000469769 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
THBS3-206ENST00000469769 DCAF5Q96JK2 942 aa13.58□□□□□ -0.24
THBS3-206ENST00000469769 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
THBS3-206ENST00000469769 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
THBS3-206ENST00000469769 MCM10Q7L590 875 aa13.57□□□□□ -0.24
THBS3-206ENST00000469769 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
THBS3-206ENST00000469769 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
THBS3-206ENST00000469769 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
THBS3-206ENST00000469769 CCDC9Q9Y3X0 531 aaKnown RBP13.57□□□□□ -0.24
THBS3-206ENST00000469769 BCL9O00512 1426 aa13.56□□□□□ -0.24
THBS3-206ENST00000469769 GNAI1P63096 354 aa13.56□□□□□ -0.24
THBS3-206ENST00000469769 DDB1Q16531 1140 aa13.56□□□□□ -0.24
THBS3-206ENST00000469769 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
THBS3-206ENST00000469769 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
THBS3-206ENST00000469769 RBM6P78332 1123 aaKnown RBP13.55□□□□□ -0.24
THBS3-206ENST00000469769 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
THBS3-206ENST00000469769 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
THBS3-206ENST00000469769 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
THBS3-206ENST00000469769 TOGARAM1Q9Y4F4 1720 aa13.54□□□□□ -0.24
THBS3-206ENST00000469769 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
THBS3-206ENST00000469769 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
THBS3-206ENST00000469769 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms