RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 NUP188Q5SRE5 1749 aa36.53■■■■□ 3.44
SNX5-206ENST00000469704 NHSQ6T4R5 1651 aa36.51■■■■□ 3.44
SNX5-206ENST00000469704 MEGF6O75095 1541 aa36.51■■■■□ 3.44
SNX5-206ENST00000469704 USHBP1Q8N6Y0 703 aa36.51■■■■□ 3.44
SNX5-206ENST00000469704 ACSBG1Q96GR2 724 aa36.51■■■■□ 3.44
SNX5-206ENST00000469704 TATP17735 454 aaPredicted RBP36.49■■■■□ 3.43
SNX5-206ENST00000469704 TNNT2P45379 298 aaPredicted RBP36.49■■■■□ 3.43
SNX5-206ENST00000469704 PROM2Q8N271 834 aa36.48■■■■□ 3.43
SNX5-206ENST00000469704 MORC1Q86VD1 984 aa36.47■■■■□ 3.43
SNX5-206ENST00000469704 NCAPD2Q15021 1401 aa36.43■■■■□ 3.42
SNX5-206ENST00000469704 SHANK3Q9BYB0 1731 aa36.43■■■■□ 3.42
SNX5-206ENST00000469704 TXNRD1Q16881 649 aa36.43■■■■□ 3.42
SNX5-206ENST00000469704 AMER1Q5JTC6 1135 aaPredicted RBP36.42■■■■□ 3.42
SNX5-206ENST00000469704 EYA1Q99502 592 aa36.41■■■■□ 3.42
SNX5-206ENST00000469704 PER1O15534 1290 aaPredicted RBP36.4■■■■□ 3.42
SNX5-206ENST00000469704 BTAF1O14981 1849 aa36.38■■■■□ 3.42
SNX5-206ENST00000469704 LRP5O75197 1615 aa36.37■■■■□ 3.41
SNX5-206ENST00000469704 EIF4A2Q14240 407 aaKnown RBP36.37■■■■□ 3.41
SNX5-206ENST00000469704 PCDH11XQ9BZA7 1347 aa36.36■■■■□ 3.41
SNX5-206ENST00000469704 PCDH11YQ9BZA8 1340 aa36.36■■■■□ 3.41
SNX5-206ENST00000469704 PRIM1P49642 420 aaKnown RBP36.35■■■■□ 3.41
SNX5-206ENST00000469704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.33■■■■□ 3.41
SNX5-206ENST00000469704 SYTL4Q96C24 671 aaPredicted RBP36.32■■■■□ 3.4
SNX5-206ENST00000469704 SPG7Q9UQ90 795 aa36.31■■■■□ 3.4
SNX5-206ENST00000469704 ANO8Q9HCE9 1232 aaPredicted RBP36.3■■■■□ 3.4
SNX5-206ENST00000469704 DOT1LQ8TEK3 1739 aa36.3■■■■□ 3.4
SNX5-206ENST00000469704 CYP27B1O15528 508 aa36.29■■■■□ 3.4
SNX5-206ENST00000469704 PLEKHG2Q9H7P9 1386 aa36.28■■■■□ 3.4
SNX5-206ENST00000469704 PKD1L3Q7Z443 1732 aa36.28■■■■□ 3.4
SNX5-206ENST00000469704 STK32BQ9NY57 414 aa36.27■■■■□ 3.4
SNX5-206ENST00000469704 IGSF1Q8N6C5 1336 aa36.27■■■■□ 3.4
SNX5-206ENST00000469704 SLC15A2Q16348 729 aa36.25■■■■□ 3.39
SNX5-206ENST00000469704 SLC27A3Q5K4L6 730 aa36.25■■■■□ 3.39
SNX5-206ENST00000469704 NPC1L1Q9UHC9 1359 aa36.25■■■■□ 3.39
SNX5-206ENST00000469704 NKX1-1Q15270 411 aaPredicted RBP36.24■■■■□ 3.39
SNX5-206ENST00000469704 CC2D1BQ5T0F9 858 aaKnown RBP36.2■■■■□ 3.39
SNX5-206ENST00000469704 LRRC4BQ9NT99 713 aa36.2■■■■□ 3.39
SNX5-206ENST00000469704 IFNL2Q8IZJ0 200 aa36.18■■■■□ 3.38
SNX5-206ENST00000469704 SPON1Q9HCB6 807 aa36.18■■■■□ 3.38
SNX5-206ENST00000469704 MTHFSP49914 203 aa36.17■■■■□ 3.38
SNX5-206ENST00000469704 LY75O60449 1722 aa36.16■■■■□ 3.38
SNX5-206ENST00000469704 IL13P35225 146 aa36.15■■■■□ 3.38
SNX5-206ENST00000469704 PAPPAQ13219 1627 aa36.15■■■■□ 3.38
SNX5-206ENST00000469704 CASZ1Q86V15 1759 aa36.13■■■■□ 3.37
SNX5-206ENST00000469704 PHKG2P15735 406 aa36.13■■■■□ 3.37
SNX5-206ENST00000469704 MPRIPQ6WCQ1 1025 aa36.13■■■■□ 3.37
SNX5-206ENST00000469704 HMGB2P26583 209 aaKnown RBP36.12■■■■□ 3.37
SNX5-206ENST00000469704 AMOTQ4VCS5 1084 aa36.12■■■■□ 3.37
SNX5-206ENST00000469704 PLEKHO1Q53GL0 409 aaPredicted RBP36.12■■■■□ 3.37
SNX5-206ENST00000469704 ITGB4P16144 1822 aa36.11■■■■□ 3.37
SNX5-206ENST00000469704 AKT1S1Q96B36 256 aa36.09■■■■□ 3.37
SNX5-206ENST00000469704 PDGFDQ9GZP0 370 aaPredicted RBP36.09■■■■□ 3.37
SNX5-206ENST00000469704 TOGARAM1Q9Y4F4 1720 aa36.08■■■■□ 3.37
SNX5-206ENST00000469704 KDRP35968 1356 aa36.08■■■■□ 3.37
SNX5-206ENST00000469704 SULT6B1Q6IMI4 303 aa36.08■■■■□ 3.37
SNX5-206ENST00000469704 CCNL1Q9UK58 526 aaPredicted RBP36.08■■■■□ 3.37
SNX5-206ENST00000469704 SMARCC1Q92922 1105 aaPredicted RBP36.07■■■■□ 3.36
SNX5-206ENST00000469704 HSP90AB1P08238 724 aaKnown RBP36.06■■■■□ 3.36
SNX5-206ENST00000469704 ZNF827Q17R98 1081 aa36.06■■■■□ 3.36
SNX5-206ENST00000469704 PIGBQ92521 554 aa36.06■■■■□ 3.36
SNX5-206ENST00000469704 AEBP1Q8IUX7 1158 aa36.05■■■■□ 3.36
SNX5-206ENST00000469704 KCNQ4P56696 695 aa36.03■■■■□ 3.36
SNX5-206ENST00000469704 DIAPH1O60610 1272 aaKnown RBP36.02■■■■□ 3.36
SNX5-206ENST00000469704 TMOD3Q9NYL9 352 aa36.02■■■■□ 3.36
SNX5-206ENST00000469704 PALLDQ8WX93 1383 aa36.02■■■■□ 3.36
SNX5-206ENST00000469704 ZBTB7AO95365 584 aa36.01■■■■□ 3.36
SNX5-206ENST00000469704 DCAF5Q96JK2 942 aa36.01■■■■□ 3.36
SNX5-206ENST00000469704 ERVV-2B6SEH9 535 aa36■■■■□ 3.35
SNX5-206ENST00000469704 MTFR1LQ9H019 292 aa36■■■■□ 3.35
SNX5-206ENST00000469704 PPP1R1BQ9UD71 204 aaPredicted RBP36■■■■□ 3.35
SNX5-206ENST00000469704 QSER1Q2KHR3 1735 aa36■■■■□ 3.35
SNX5-206ENST00000469704 CNGB1Q14028 1251 aaPredicted RBP35.99■■■■□ 3.35
SNX5-206ENST00000469704 ZNF530Q6P9A1 599 aaPredicted RBP35.99■■■■□ 3.35
SNX5-206ENST00000469704 TFCP2L1Q9NZI6 479 aa35.98■■■■□ 3.35
SNX5-206ENST00000469704 SLC16A10Q8TF71 515 aa35.97■■■■□ 3.35
SNX5-206ENST00000469704 C1orf141Q5JVX7 400 aa35.96■■■■□ 3.35
SNX5-206ENST00000469704 ATF5Q9Y2D1 282 aaPredicted RBP35.96■■■■□ 3.35
SNX5-206ENST00000469704 PTGER2P43116 358 aa35.94■■■■□ 3.34
SNX5-206ENST00000469704 PNPLA7Q6ZV29 1317 aa35.92■■■■□ 3.34
SNX5-206ENST00000469704 ASAP1Q9ULH1 1129 aa35.91■■■■□ 3.34
SNX5-206ENST00000469704 TAF1LQ8IZX4 1826 aa35.91■■■■□ 3.34
SNX5-206ENST00000469704 HMOX1P09601 288 aa35.9■■■■□ 3.34
SNX5-206ENST00000469704 C5P01031 1676 aa35.9■■■■□ 3.34
SNX5-206ENST00000469704 SGIP1Q9BQI5 828 aa35.89■■■■□ 3.34
SNX5-206ENST00000469704 COL3A1P02461 1466 aaPredicted RBP35.88■■■■□ 3.33
SNX5-206ENST00000469704 LOC102724428A0A0B4J2F2 783 aa35.88■■■■□ 3.33
SNX5-206ENST00000469704 SIK1P57059 783 aa35.88■■■■□ 3.33
SNX5-206ENST00000469704 ATG3Q9NT62 314 aa35.88■■■■□ 3.33
SNX5-206ENST00000469704 TUBGCP6Q96RT7 1819 aa35.87■■■■□ 3.33
SNX5-206ENST00000469704 CABP4P57796 275 aa35.87■■■■□ 3.33
SNX5-206ENST00000469704 AKAP4Q5JQC9 854 aa35.87■■■■□ 3.33
SNX5-206ENST00000469704 CFAP53Q96M91 514 aa35.87■■■■□ 3.33
SNX5-206ENST00000469704 KDM6AO15550 1401 aaPredicted RBP35.86■■■■□ 3.33
SNX5-206ENST00000469704 FLAD1Q8NFF5 587 aa35.85■■■■□ 3.33
SNX5-206ENST00000469704 PPP2R1AP30153 589 aa35.83■■■■□ 3.33
SNX5-206ENST00000469704 U2SURPO15042 1029 aaKnown RBP35.82■■■■□ 3.32
SNX5-206ENST00000469704 ATP6V1AP38606 617 aa35.8■■■■□ 3.32
SNX5-206ENST00000469704 COL23A1Q86Y22 540 aaPredicted RBP35.8■■■■□ 3.32
SNX5-206ENST00000469704 C4BP0C0L5 1744 aa35.8■■■■□ 3.32
SNX5-206ENST00000469704 NFATC2IPQ8NCF5 419 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms