RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
KCNC4-206ENST00000469655 HS1BP3Q53T59 392 aa18.66■□□□□ 0.58
KCNC4-206ENST00000469655 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
KCNC4-206ENST00000469655 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
KCNC4-206ENST00000469655 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
KCNC4-206ENST00000469655 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
KCNC4-206ENST00000469655 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
KCNC4-206ENST00000469655 NEURL4Q96JN8 1562 aa18.65■□□□□ 0.58
KCNC4-206ENST00000469655 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
KCNC4-206ENST00000469655 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
KCNC4-206ENST00000469655 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
KCNC4-206ENST00000469655 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
KCNC4-206ENST00000469655 PKP1Q13835 747 aa18.64■□□□□ 0.57
KCNC4-206ENST00000469655 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
KCNC4-206ENST00000469655 K7ELQ4 463 aaPredicted RBP18.64■□□□□ 0.57
KCNC4-206ENST00000469655 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
KCNC4-206ENST00000469655 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
KCNC4-206ENST00000469655 SMARCA5O60264 1052 aaPredicted RBP18.63■□□□□ 0.57
KCNC4-206ENST00000469655 POLKQ9UBT6 870 aa18.62■□□□□ 0.57
KCNC4-206ENST00000469655 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
KCNC4-206ENST00000469655 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
KCNC4-206ENST00000469655 NSD2O96028 1365 aa18.62■□□□□ 0.57
KCNC4-206ENST00000469655 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
KCNC4-206ENST00000469655 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
KCNC4-206ENST00000469655 NOLC1Q14978 699 aaKnown RBP eCLIP18.61■□□□□ 0.57
KCNC4-206ENST00000469655 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
KCNC4-206ENST00000469655 PDLIM2Q96JY6 352 aa18.61■□□□□ 0.57
KCNC4-206ENST00000469655 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
KCNC4-206ENST00000469655 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
KCNC4-206ENST00000469655 ZNF445P59923 1031 aa18.6■□□□□ 0.57
KCNC4-206ENST00000469655 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
KCNC4-206ENST00000469655 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
KCNC4-206ENST00000469655 DDIT3P35638 169 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 TRIM6-TRIM34B2RNG4 842 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
KCNC4-206ENST00000469655 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 CHMP4CQ96CF2 233 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 SHPRHQ149N8 1683 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 IQSEC2Q5JU85 1478 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
KCNC4-206ENST00000469655 MCM5P33992 734 aa18.58■□□□□ 0.57
KCNC4-206ENST00000469655 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.57
KCNC4-206ENST00000469655 IRX3P78415 501 aaPredicted RBP18.58■□□□□ 0.56
KCNC4-206ENST00000469655 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
KCNC4-206ENST00000469655 NSFL1CQ9UNZ2 370 aaKnown RBP18.57■□□□□ 0.56
KCNC4-206ENST00000469655 PTPRMP28827 1452 aa18.57■□□□□ 0.56
KCNC4-206ENST00000469655 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
KCNC4-206ENST00000469655 TMEM63CQ9P1W3 806 aa18.57■□□□□ 0.56
KCNC4-206ENST00000469655 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
KCNC4-206ENST00000469655 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
KCNC4-206ENST00000469655 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
KCNC4-206ENST00000469655 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
KCNC4-206ENST00000469655 PRIMPOLQ96LW4 560 aa18.56■□□□□ 0.56
KCNC4-206ENST00000469655 LMBRD1Q9NUN5 540 aa18.56■□□□□ 0.56
KCNC4-206ENST00000469655 GPT2Q8TD30 523 aa18.56■□□□□ 0.56
KCNC4-206ENST00000469655 COG3Q96JB2 828 aa18.55■□□□□ 0.56
KCNC4-206ENST00000469655 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
KCNC4-206ENST00000469655 SNX21Q969T3 373 aa18.55■□□□□ 0.56
KCNC4-206ENST00000469655 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
KCNC4-206ENST00000469655 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
KCNC4-206ENST00000469655 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
KCNC4-206ENST00000469655 FCHSD2O94868 740 aa18.54■□□□□ 0.56
KCNC4-206ENST00000469655 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
KCNC4-206ENST00000469655 SLC26A8Q96RN1 970 aa18.54■□□□□ 0.56
KCNC4-206ENST00000469655 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
KCNC4-206ENST00000469655 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
KCNC4-206ENST00000469655 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
KCNC4-206ENST00000469655 TNNT3P45378 269 aaPredicted RBP18.54■□□□□ 0.56
KCNC4-206ENST00000469655 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
KCNC4-206ENST00000469655 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
KCNC4-206ENST00000469655 LRSAM1Q6UWE0 723 aa18.53■□□□□ 0.56
KCNC4-206ENST00000469655 MCM10Q7L590 875 aa18.53■□□□□ 0.56
KCNC4-206ENST00000469655 METP08581 1390 aa18.53■□□□□ 0.56
KCNC4-206ENST00000469655 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.56
KCNC4-206ENST00000469655 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.56
KCNC4-206ENST00000469655 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
KCNC4-206ENST00000469655 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
KCNC4-206ENST00000469655 SECISBP2LQ93073 1101 aaKnown RBP18.51■□□□□ 0.55
KCNC4-206ENST00000469655 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
KCNC4-206ENST00000469655 F6X3S4 739 aa18.51■□□□□ 0.55
KCNC4-206ENST00000469655 AK9Q5TCS8 1911 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
KCNC4-206ENST00000469655 TIGD1Q96MW7 591 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 ZFYVE9O95405 1425 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 RBM25P49756 843 aaKnown RBP18.5■□□□□ 0.55
KCNC4-206ENST00000469655 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 CHD1LQ86WJ1 897 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 GDPD2Q9HCC8 539 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
KCNC4-206ENST00000469655 CCDC66A2RUB6 948 aa18.49■□□□□ 0.55
KCNC4-206ENST00000469655 NAA30Q147X3 362 aaPredicted RBP18.49■□□□□ 0.55
KCNC4-206ENST00000469655 TSPY26PQ9H489 355 aa18.49■□□□□ 0.55
KCNC4-206ENST00000469655 MAP4K4O95819 1239 aaPredicted RBP18.48■□□□□ 0.55
KCNC4-206ENST00000469655 NUCB2P80303 420 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
KCNC4-206ENST00000469655 TMX1Q9H3N1 280 aa18.48■□□□□ 0.55
KCNC4-206ENST00000469655 RICTORQ6R327 1708 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms