RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 KIF7Q2M1P5 1343 aa25.12■■□□□ 1.61
PHGDH-204ENST00000469443 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
PHGDH-204ENST00000469443 DDX54Q8TDD1 881 aaKnown RBP25.11■■□□□ 1.61
PHGDH-204ENST00000469443 ACSBG1Q96GR2 724 aa25.11■■□□□ 1.61
PHGDH-204ENST00000469443 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
PHGDH-204ENST00000469443 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
PHGDH-204ENST00000469443 ZCRB1Q8TBF4 217 aaKnown RBP25.1■■□□□ 1.61
PHGDH-204ENST00000469443 RAPGEF4Q8WZA2 1011 aa25.09■■□□□ 1.61
PHGDH-204ENST00000469443 TNNT2P45379 298 aaPredicted RBP25.08■■□□□ 1.61
PHGDH-204ENST00000469443 NCAPD2Q15021 1401 aa25.07■■□□□ 1.6
PHGDH-204ENST00000469443 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
PHGDH-204ENST00000469443 TATP17735 454 aaPredicted RBP25.06■■□□□ 1.6
PHGDH-204ENST00000469443 PROM2Q8N271 834 aa25.06■■□□□ 1.6
PHGDH-204ENST00000469443 KNSTRNQ9Y448 316 aa25.06■■□□□ 1.6
PHGDH-204ENST00000469443 TXNRD1Q16881 649 aa25.04■■□□□ 1.6
PHGDH-204ENST00000469443 MORC1Q86VD1 984 aa25.02■■□□□ 1.6
PHGDH-204ENST00000469443 EYA1Q99502 592 aa25.01■■□□□ 1.59
PHGDH-204ENST00000469443 ANO8Q9HCE9 1232 aaPredicted RBP25■■□□□ 1.59
PHGDH-204ENST00000469443 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
PHGDH-204ENST00000469443 PCDH11XQ9BZA7 1347 aa24.99■■□□□ 1.59
PHGDH-204ENST00000469443 PCDH11YQ9BZA8 1340 aa24.99■■□□□ 1.59
PHGDH-204ENST00000469443 CASZ1Q86V15 1759 aa24.98■■□□□ 1.59
PHGDH-204ENST00000469443 LY75O60449 1722 aa24.98■■□□□ 1.59
PHGDH-204ENST00000469443 EIF4A2Q14240 407 aaKnown RBP24.98■■□□□ 1.59
PHGDH-204ENST00000469443 ITGB4P16144 1822 aa24.98■■□□□ 1.59
PHGDH-204ENST00000469443 PAPPAQ13219 1627 aa24.97■■□□□ 1.59
PHGDH-204ENST00000469443 PRIM1P49642 420 aaKnown RBP24.97■■□□□ 1.59
PHGDH-204ENST00000469443 SYTL4Q96C24 671 aaPredicted RBP24.97■■□□□ 1.59
PHGDH-204ENST00000469443 TOGARAM1Q9Y4F4 1720 aa24.95■■□□□ 1.59
PHGDH-204ENST00000469443 PER1O15534 1290 aaPredicted RBP24.94■■□□□ 1.58
PHGDH-204ENST00000469443 STK32BQ9NY57 414 aa24.94■■□□□ 1.58
PHGDH-204ENST00000469443 CYP27B1O15528 508 aa24.93■■□□□ 1.58
PHGDH-204ENST00000469443 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
PHGDH-204ENST00000469443 IGSF1Q8N6C5 1336 aa24.91■■□□□ 1.58
PHGDH-204ENST00000469443 SLC15A2Q16348 729 aa24.91■■□□□ 1.58
PHGDH-204ENST00000469443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.91■■□□□ 1.58
PHGDH-204ENST00000469443 PLEKHG2Q9H7P9 1386 aa24.9■■□□□ 1.58
PHGDH-204ENST00000469443 QSER1Q2KHR3 1735 aa24.89■■□□□ 1.58
PHGDH-204ENST00000469443 SLC27A3Q5K4L6 730 aa24.89■■□□□ 1.58
PHGDH-204ENST00000469443 LRRC4BQ9NT99 713 aa24.89■■□□□ 1.58
PHGDH-204ENST00000469443 SPON1Q9HCB6 807 aa24.87■■□□□ 1.57
PHGDH-204ENST00000469443 TUBGCP6Q96RT7 1819 aa24.86■■□□□ 1.57
PHGDH-204ENST00000469443 NPC1L1Q9UHC9 1359 aa24.86■■□□□ 1.57
PHGDH-204ENST00000469443 NKX1-1Q15270 411 aaPredicted RBP24.86■■□□□ 1.57
PHGDH-204ENST00000469443 CC2D1BQ5T0F9 858 aaKnown RBP24.86■■□□□ 1.57
PHGDH-204ENST00000469443 PDGFDQ9GZP0 370 aaPredicted RBP24.85■■□□□ 1.57
PHGDH-204ENST00000469443 TAF1LQ8IZX4 1826 aa24.84■■□□□ 1.57
PHGDH-204ENST00000469443 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
PHGDH-204ENST00000469443 PHKG2P15735 406 aa24.82■■□□□ 1.56
PHGDH-204ENST00000469443 MTHFSP49914 203 aa24.82■■□□□ 1.56
PHGDH-204ENST00000469443 ZNF827Q17R98 1081 aa24.82■■□□□ 1.56
PHGDH-204ENST00000469443 MPRIPQ6WCQ1 1025 aa24.82■■□□□ 1.56
PHGDH-204ENST00000469443 C5P01031 1676 aa24.81■■□□□ 1.56
PHGDH-204ENST00000469443 IL13P35225 146 aa24.81■■□□□ 1.56
PHGDH-204ENST00000469443 KCNQ4P56696 695 aa24.8■■□□□ 1.56
PHGDH-204ENST00000469443 AKT1S1Q96B36 256 aa24.8■■□□□ 1.56
PHGDH-204ENST00000469443 CCNL1Q9UK58 526 aaPredicted RBP24.8■■□□□ 1.56
PHGDH-204ENST00000469443 PLEKHO1Q53GL0 409 aaPredicted RBP24.79■■□□□ 1.56
PHGDH-204ENST00000469443 AEBP1Q8IUX7 1158 aa24.79■■□□□ 1.56
PHGDH-204ENST00000469443 KDRP35968 1356 aa24.79■■□□□ 1.56
PHGDH-204ENST00000469443 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
PHGDH-204ENST00000469443 PALLDQ8WX93 1383 aa24.78■■□□□ 1.56
PHGDH-204ENST00000469443 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
PHGDH-204ENST00000469443 PIGBQ92521 554 aa24.77■■□□□ 1.56
PHGDH-204ENST00000469443 PPP1R1BQ9UD71 204 aaPredicted RBP24.77■■□□□ 1.56
PHGDH-204ENST00000469443 AMOTQ4VCS5 1084 aa24.76■■□□□ 1.55
PHGDH-204ENST00000469443 SMARCC1Q92922 1105 aaPredicted RBP24.76■■□□□ 1.55
PHGDH-204ENST00000469443 VIRMAQ69YN4 1812 aaKnown RBP24.75■■□□□ 1.55
PHGDH-204ENST00000469443 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
PHGDH-204ENST00000469443 ZNF530Q6P9A1 599 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-204ENST00000469443 MTFR1LQ9H019 292 aa24.74■■□□□ 1.55
PHGDH-204ENST00000469443 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
PHGDH-204ENST00000469443 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-204ENST00000469443 HSP90AB1P08238 724 aaKnown RBP24.73■■□□□ 1.55
PHGDH-204ENST00000469443 TFCP2L1Q9NZI6 479 aa24.73■■□□□ 1.55
PHGDH-204ENST00000469443 SCN11AQ9UI33 1791 aa24.72■■□□□ 1.55
PHGDH-204ENST00000469443 COL24A1Q17RW2 1714 aa24.72■■□□□ 1.55
PHGDH-204ENST00000469443 HMGB2P26583 209 aaKnown RBP24.72■■□□□ 1.55
PHGDH-204ENST00000469443 COL3A1P02461 1466 aaPredicted RBP24.71■■□□□ 1.55
PHGDH-204ENST00000469443 PNPLA7Q6ZV29 1317 aa24.71■■□□□ 1.55
PHGDH-204ENST00000469443 DIAPH1O60610 1272 aaKnown RBP24.71■■□□□ 1.55
PHGDH-204ENST00000469443 PTGER2P43116 358 aa24.71■■□□□ 1.55
PHGDH-204ENST00000469443 DCAF5Q96JK2 942 aa24.71■■□□□ 1.55
PHGDH-204ENST00000469443 C4BP0C0L5 1744 aa24.7■■□□□ 1.54
PHGDH-204ENST00000469443 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
PHGDH-204ENST00000469443 ERVV-2B6SEH9 535 aa24.69■■□□□ 1.54
PHGDH-204ENST00000469443 C1orf141Q5JVX7 400 aa24.69■■□□□ 1.54
PHGDH-204ENST00000469443 SLC16A10Q8TF71 515 aa24.68■■□□□ 1.54
PHGDH-204ENST00000469443 UBR3Q6ZT12 1888 aa24.68■■□□□ 1.54
PHGDH-204ENST00000469443 HMOX1P09601 288 aa24.67■■□□□ 1.54
PHGDH-204ENST00000469443 SGIP1Q9BQI5 828 aa24.67■■□□□ 1.54
PHGDH-204ENST00000469443 ASAP1Q9ULH1 1129 aa24.67■■□□□ 1.54
PHGDH-204ENST00000469443 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
PHGDH-204ENST00000469443 LOC102724428A0A0B4J2F2 783 aa24.65■■□□□ 1.54
PHGDH-204ENST00000469443 SIK1P57059 783 aa24.65■■□□□ 1.54
PHGDH-204ENST00000469443 ATG3Q9NT62 314 aa24.65■■□□□ 1.54
PHGDH-204ENST00000469443 CABP4P57796 275 aa24.62■■□□□ 1.53
PHGDH-204ENST00000469443 AKAP4Q5JQC9 854 aa24.62■■□□□ 1.53
PHGDH-204ENST00000469443 COL23A1Q86Y22 540 aaPredicted RBP24.61■■□□□ 1.53
PHGDH-204ENST00000469443 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms