RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 POLD1P28340 1107 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 HOXC9P31274 260 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 KCNQ4P56696 695 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 GPR162Q16538 588 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 COG3Q96JB2 828 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
SNED1-209ENST00000469006 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
SNED1-209ENST00000469006 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
SNED1-209ENST00000469006 AMPHP49418 695 aa20.49■□□□□ 0.87
SNED1-209ENST00000469006 FBLN1P23142 703 aa20.48■□□□□ 0.87
SNED1-209ENST00000469006 TESK2Q96S53 571 aa20.48■□□□□ 0.87
SNED1-209ENST00000469006 RTL1A6NKG5 1358 aa20.47■□□□□ 0.87
SNED1-209ENST00000469006 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
SNED1-209ENST00000469006 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
SNED1-209ENST00000469006 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
SNED1-209ENST00000469006 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SNED1-209ENST00000469006 C1QTNF8P60827 252 aa20.45■□□□□ 0.86
SNED1-209ENST00000469006 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
SNED1-209ENST00000469006 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
SNED1-209ENST00000469006 RRS1Q15050 365 aaKnown RBP20.43■□□□□ 0.86
SNED1-209ENST00000469006 USP47Q96K76 1375 aa20.43■□□□□ 0.86
SNED1-209ENST00000469006 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
SNED1-209ENST00000469006 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
SNED1-209ENST00000469006 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
SNED1-209ENST00000469006 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
SNED1-209ENST00000469006 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
SNED1-209ENST00000469006 MSH5O43196 834 aa20.41■□□□□ 0.86
SNED1-209ENST00000469006 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
SNED1-209ENST00000469006 C5P01031 1676 aa20.39■□□□□ 0.86
SNED1-209ENST00000469006 SLC24A1O60721 1099 aa20.39■□□□□ 0.85
SNED1-209ENST00000469006 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
SNED1-209ENST00000469006 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
SNED1-209ENST00000469006 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.85
SNED1-209ENST00000469006 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
SNED1-209ENST00000469006 FYB1O15117 783 aa20.37■□□□□ 0.85
SNED1-209ENST00000469006 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
SNED1-209ENST00000469006 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
SNED1-209ENST00000469006 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
SNED1-209ENST00000469006 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
SNED1-209ENST00000469006 YBX3P16989 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNED1-209ENST00000469006 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
SNED1-209ENST00000469006 INSRP06213 1382 aa20.35■□□□□ 0.85
SNED1-209ENST00000469006 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
SNED1-209ENST00000469006 FLT4P35916 1363 aa20.34■□□□□ 0.85
SNED1-209ENST00000469006 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
SNED1-209ENST00000469006 GRIN3BO60391 1043 aa20.33■□□□□ 0.85
SNED1-209ENST00000469006 TMF1P82094 1093 aa20.33■□□□□ 0.85
SNED1-209ENST00000469006 HSP90AB2PQ58FF8 381 aa20.33■□□□□ 0.85
SNED1-209ENST00000469006 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
SNED1-209ENST00000469006 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
SNED1-209ENST00000469006 KIF24Q5T7B8 1368 aa20.31■□□□□ 0.84
SNED1-209ENST00000469006 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
SNED1-209ENST00000469006 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
SNED1-209ENST00000469006 CYP27B1O15528 508 aa20.29■□□□□ 0.84
SNED1-209ENST00000469006 FLAD1Q8NFF5 587 aa20.29■□□□□ 0.84
SNED1-209ENST00000469006 ITGB4P16144 1822 aa20.28■□□□□ 0.84
SNED1-209ENST00000469006 CD2APQ9Y5K6 639 aa20.28■□□□□ 0.84
SNED1-209ENST00000469006 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
SNED1-209ENST00000469006 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
SNED1-209ENST00000469006 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
SNED1-209ENST00000469006 AK7Q96M32 723 aa20.26■□□□□ 0.83
SNED1-209ENST00000469006 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
SNED1-209ENST00000469006 NSD3Q9BZ95 1437 aa20.26■□□□□ 0.83
SNED1-209ENST00000469006 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
SNED1-209ENST00000469006 AMIGO3Q86WK7 504 aa20.25■□□□□ 0.83
SNED1-209ENST00000469006 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
SNED1-209ENST00000469006 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
SNED1-209ENST00000469006 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
SNED1-209ENST00000469006 PHF14O94880 888 aa20.23■□□□□ 0.83
SNED1-209ENST00000469006 PIGBQ92521 554 aa20.23■□□□□ 0.83
SNED1-209ENST00000469006 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
SNED1-209ENST00000469006 CEP350Q5VT06 3117 aa20.23■□□□□ 0.83
SNED1-209ENST00000469006 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
SNED1-209ENST00000469006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
SNED1-209ENST00000469006 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
SNED1-209ENST00000469006 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
SNED1-209ENST00000469006 ADCY9O60503 1353 aa20.21■□□□□ 0.83
SNED1-209ENST00000469006 NKX1-1Q15270 411 aaPredicted RBP20.2■□□□□ 0.82
SNED1-209ENST00000469006 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
SNED1-209ENST00000469006 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
SNED1-209ENST00000469006 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
SNED1-209ENST00000469006 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
SNED1-209ENST00000469006 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
SNED1-209ENST00000469006 SSFA2P28290 1259 aa20.18■□□□□ 0.82
SNED1-209ENST00000469006 SIK1P57059 783 aa20.18■□□□□ 0.82
SNED1-209ENST00000469006 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
SNED1-209ENST00000469006 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
SNED1-209ENST00000469006 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
SNED1-209ENST00000469006 WASHC2AQ641Q2 1341 aa20.17■□□□□ 0.82
SNED1-209ENST00000469006 ZNF526Q8TF50 670 aaPredicted RBP20.16■□□□□ 0.82
SNED1-209ENST00000469006 EYA1Q99502 592 aa20.16■□□□□ 0.82
SNED1-209ENST00000469006 ITPK1Q13572 414 aa20.15■□□□□ 0.82
SNED1-209ENST00000469006 GNPATO15228 680 aa20.14■□□□□ 0.81
SNED1-209ENST00000469006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNED1-209ENST00000469006 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
SNED1-209ENST00000469006 PHKG2P15735 406 aa20.13■□□□□ 0.81
SNED1-209ENST00000469006 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
SNED1-209ENST00000469006 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
SNED1-209ENST00000469006 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
SNED1-209ENST00000469006 POLKQ9UBT6 870 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms