RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
SYN3-210ENST00000468922 CCDC7Q96M83 1385 aa11.78□□□□□ -0.52
SYN3-210ENST00000468922 RGPD5Q99666 1765 aa11.77□□□□□ -0.53
SYN3-210ENST00000468922 FYB1O15117 783 aa11.76□□□□□ -0.53
SYN3-210ENST00000468922 SOX12O15370 315 aa11.76□□□□□ -0.53
SYN3-210ENST00000468922 APLP1P51693 650 aa11.76□□□□□ -0.53
SYN3-210ENST00000468922 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
SYN3-210ENST00000468922 LTN1O94822 1766 aa11.75□□□□□ -0.53
SYN3-210ENST00000468922 MSH5O43196 834 aa11.75□□□□□ -0.53
SYN3-210ENST00000468922 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
SYN3-210ENST00000468922 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
SYN3-210ENST00000468922 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
SYN3-210ENST00000468922 CAPN15O75808 1086 aa11.74□□□□□ -0.53
SYN3-210ENST00000468922 COG3Q96JB2 828 aa11.74□□□□□ -0.53
SYN3-210ENST00000468922 IL2RBP14784 551 aa11.73□□□□□ -0.53
SYN3-210ENST00000468922 DNAJC5GQ8N7S2 189 aa11.73□□□□□ -0.53
SYN3-210ENST00000468922 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
SYN3-210ENST00000468922 NHSQ6T4R5 1651 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 ADCY9O60503 1353 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 ERBB3P21860 1342 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 KIF3CO14782 793 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 KCNQ4P56696 695 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 IP6K1Q92551 441 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
SYN3-210ENST00000468922 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.53
SYN3-210ENST00000468922 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
SYN3-210ENST00000468922 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
SYN3-210ENST00000468922 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
SYN3-210ENST00000468922 WNK3Q9BYP7 1800 aa11.71□□□□□ -0.54
SYN3-210ENST00000468922 FBLN1P23142 703 aa11.7□□□□□ -0.54
SYN3-210ENST00000468922 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
SYN3-210ENST00000468922 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
SYN3-210ENST00000468922 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
SYN3-210ENST00000468922 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
SYN3-210ENST00000468922 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
SYN3-210ENST00000468922 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 CGNL1Q0VF96 1302 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 TOMM70O94826 608 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 HOXC9P31274 260 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 PRELPP51888 382 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
SYN3-210ENST00000468922 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
SYN3-210ENST00000468922 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
SYN3-210ENST00000468922 AMPHP49418 695 aa11.67□□□□□ -0.54
SYN3-210ENST00000468922 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
SYN3-210ENST00000468922 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
SYN3-210ENST00000468922 PANK3Q9H999 370 aa11.67□□□□□ -0.54
SYN3-210ENST00000468922 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
SYN3-210ENST00000468922 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
SYN3-210ENST00000468922 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
SYN3-210ENST00000468922 BTAF1O14981 1849 aa11.66□□□□□ -0.54
SYN3-210ENST00000468922 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
SYN3-210ENST00000468922 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
SYN3-210ENST00000468922 INSRP06213 1382 aa11.65□□□□□ -0.55
SYN3-210ENST00000468922 IGSF1Q8N6C5 1336 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
SYN3-210ENST00000468922 FLAD1Q8NFF5 587 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 KLRG1Q96E93 195 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 WWC3Q9ULE0 1092 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 NSD2O96028 1365 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 FLT4P35916 1363 aa11.64□□□□□ -0.55
SYN3-210ENST00000468922 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
SYN3-210ENST00000468922 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
SYN3-210ENST00000468922 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
SYN3-210ENST00000468922 MAP2P11137 1827 aaKnown RBP11.63□□□□□ -0.55
SYN3-210ENST00000468922 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
SYN3-210ENST00000468922 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
SYN3-210ENST00000468922 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
SYN3-210ENST00000468922 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
SYN3-210ENST00000468922 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
SYN3-210ENST00000468922 HTRA3P83110 453 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
SYN3-210ENST00000468922 NBPF6Q5VWK0 638 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
SYN3-210ENST00000468922 NBPF4Q96M43 638 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
SYN3-210ENST00000468922 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
SYN3-210ENST00000468922 NMRK2Q9NPI5 230 aa11.59□□□□□ -0.55
SYN3-210ENST00000468922 FSTL1Q12841 308 aa11.58□□□□□ -0.56
SYN3-210ENST00000468922 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
SYN3-210ENST00000468922 MEGF6O75095 1541 aa11.58□□□□□ -0.56
SYN3-210ENST00000468922 KAT6BQ8WYB5 2073 aa11.58□□□□□ -0.56
SYN3-210ENST00000468922 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
SYN3-210ENST00000468922 TUBGCP6Q96RT7 1819 aa11.56□□□□□ -0.56
SYN3-210ENST00000468922 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
SYN3-210ENST00000468922 ARHGAP27Q6ZUM4 889 aa11.56□□□□□ -0.56
SYN3-210ENST00000468922 MORC1Q86VD1 984 aa11.56□□□□□ -0.56
SYN3-210ENST00000468922 AK7Q96M32 723 aa11.56□□□□□ -0.56
SYN3-210ENST00000468922 TNNT2P45379 298 aaPredicted RBP11.55□□□□□ -0.56
SYN3-210ENST00000468922 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
SYN3-210ENST00000468922 EYA1Q99502 592 aa11.55□□□□□ -0.56
SYN3-210ENST00000468922 PHF14O94880 888 aa11.54□□□□□ -0.56
SYN3-210ENST00000468922 SLC34A2O95436 690 aa11.54□□□□□ -0.56
SYN3-210ENST00000468922 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
SYN3-210ENST00000468922 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
SYN3-210ENST00000468922 BCS1LQ9Y276 419 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms