RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PALM3A6NDB9 673 aaPredicted RBP10.96□□□□□ -0.65
XRN1-207ENST00000468894 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
XRN1-207ENST00000468894 USP17L1Q7RTZ2 530 aa10.96□□□□□ -0.65
XRN1-207ENST00000468894 TRIM52Q96A61 297 aa10.96□□□□□ -0.65
XRN1-207ENST00000468894 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
XRN1-207ENST00000468894 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
XRN1-207ENST00000468894 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
XRN1-207ENST00000468894 RELBQ01201 579 aa10.95□□□□□ -0.66
XRN1-207ENST00000468894 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
XRN1-207ENST00000468894 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
XRN1-207ENST00000468894 USP4Q13107 963 aa10.94□□□□□ -0.66
XRN1-207ENST00000468894 EML3Q32P44 896 aa10.94□□□□□ -0.66
XRN1-207ENST00000468894 C6orf118Q5T5N4 469 aa10.94□□□□□ -0.66
XRN1-207ENST00000468894 TSEN34Q9BSV6 310 aaKnown RBP10.94□□□□□ -0.66
XRN1-207ENST00000468894 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
XRN1-207ENST00000468894 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
XRN1-207ENST00000468894 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
XRN1-207ENST00000468894 ZFP42Q96MM3 310 aa10.93□□□□□ -0.66
XRN1-207ENST00000468894 ATP5J2-PTCD1G3V325 749 aa10.92□□□□□ -0.66
XRN1-207ENST00000468894 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
XRN1-207ENST00000468894 BMP2P12643 396 aa10.92□□□□□ -0.66
XRN1-207ENST00000468894 PTGIRP43119 386 aa10.92□□□□□ -0.66
XRN1-207ENST00000468894 SCARF1Q14162 830 aa10.92□□□□□ -0.66
XRN1-207ENST00000468894 POTECB2RU33 542 aa10.91□□□□□ -0.66
XRN1-207ENST00000468894 SPINT1O43278 529 aa10.91□□□□□ -0.66
XRN1-207ENST00000468894 UPP2O95045 317 aa10.91□□□□□ -0.66
XRN1-207ENST00000468894 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
XRN1-207ENST00000468894 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
XRN1-207ENST00000468894 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
XRN1-207ENST00000468894 CCDC82Q8N4S0 544 aa10.9□□□□□ -0.66
XRN1-207ENST00000468894 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
XRN1-207ENST00000468894 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
XRN1-207ENST00000468894 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
XRN1-207ENST00000468894 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
XRN1-207ENST00000468894 ARHGEF10LQ9HCE6 1279 aa10.89□□□□□ -0.67
XRN1-207ENST00000468894 LMOD1P29536 600 aaPredicted RBP10.88□□□□□ -0.67
XRN1-207ENST00000468894 GTF2IP78347 998 aa10.88□□□□□ -0.67
XRN1-207ENST00000468894 CCDC97Q96F63 343 aaPredicted RBP10.88□□□□□ -0.67
XRN1-207ENST00000468894 INSM2Q96T92 566 aaPredicted RBP10.88□□□□□ -0.67
XRN1-207ENST00000468894 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
XRN1-207ENST00000468894 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
XRN1-207ENST00000468894 PCDHGA11Q9Y5H2 935 aa10.88□□□□□ -0.67
XRN1-207ENST00000468894 GNRH1P01148 92 aa10.87□□□□□ -0.67
XRN1-207ENST00000468894 SERPINA10Q9UK55 444 aa10.87□□□□□ -0.67
XRN1-207ENST00000468894 A0A1W2PRU2 124 aa10.86□□□□□ -0.67
XRN1-207ENST00000468894 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
XRN1-207ENST00000468894 SCNN1DP51172 638 aa10.86□□□□□ -0.67
XRN1-207ENST00000468894 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
XRN1-207ENST00000468894 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
XRN1-207ENST00000468894 SOS2Q07890 1332 aaPredicted RBP10.85□□□□□ -0.67
XRN1-207ENST00000468894 IL2RAP01589 272 aa10.85□□□□□ -0.67
XRN1-207ENST00000468894 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
XRN1-207ENST00000468894 CLDN10P78369 228 aa10.85□□□□□ -0.67
XRN1-207ENST00000468894 CLN3Q13286 438 aa10.85□□□□□ -0.67
XRN1-207ENST00000468894 KANK4Q5T7N3 995 aaPredicted RBP10.85□□□□□ -0.67
XRN1-207ENST00000468894 FOXD4L5Q5VV16 416 aaPredicted RBP10.85□□□□□ -0.67
XRN1-207ENST00000468894 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
XRN1-207ENST00000468894 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
XRN1-207ENST00000468894 TRIM50Q86XT4 487 aa10.84□□□□□ -0.67
XRN1-207ENST00000468894 POLMQ9NP87 494 aaPredicted RBP10.84□□□□□ -0.67
XRN1-207ENST00000468894 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
XRN1-207ENST00000468894 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
XRN1-207ENST00000468894 MEN1O00255 615 aa10.83□□□□□ -0.68
XRN1-207ENST00000468894 RFX1P22670 979 aa10.83□□□□□ -0.68
XRN1-207ENST00000468894 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 TMEM229AB2RXF0 380 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 GDF10P55107 478 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 RNF217Q8TC41 542 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 HRH3Q9Y5N1 445 aa10.82□□□□□ -0.68
XRN1-207ENST00000468894 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
XRN1-207ENST00000468894 ATP1A2P50993 1020 aa10.81□□□□□ -0.68
XRN1-207ENST00000468894 PSME1Q06323 249 aa10.81□□□□□ -0.68
XRN1-207ENST00000468894 CNKSR1Q969H4 720 aa10.81□□□□□ -0.68
XRN1-207ENST00000468894 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
XRN1-207ENST00000468894 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
XRN1-207ENST00000468894 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
XRN1-207ENST00000468894 CRTC2Q53ET0 693 aaPredicted RBP10.8□□□□□ -0.68
XRN1-207ENST00000468894 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
XRN1-207ENST00000468894 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
XRN1-207ENST00000468894 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
XRN1-207ENST00000468894 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.79□□□□□ -0.68
XRN1-207ENST00000468894 DKK1O94907 266 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 INHAP05111 366 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
XRN1-207ENST00000468894 SRPK2P78362 688 aaKnown RBP10.79□□□□□ -0.68
XRN1-207ENST00000468894 SIX5Q8N196 739 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 TPCN2Q8NHX9 752 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
XRN1-207ENST00000468894 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 VRTNQ9H8Y1 702 aa10.79□□□□□ -0.68
XRN1-207ENST00000468894 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L21D6R901 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
XRN1-207ENST00000468894 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms