RNA–Protein interactions for RNA: ENST00000468647.5

FRMD1-206, Transcript of FERM domain containing 1, humanhuman

TSL 2

Gene FRMD1, Length 3,821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-206ENST00000468647 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
FRMD1-206ENST00000468647 C9orf78Q9NZ63 289 aaPredicted RBP13.71□□□□□ -0.21
FRMD1-206ENST00000468647 PREX1Q8TCU6 1659 aa13.71□□□□□ -0.21
FRMD1-206ENST00000468647 INSRP06213 1382 aa13.71□□□□□ -0.21
FRMD1-206ENST00000468647 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
FRMD1-206ENST00000468647 PTPRUQ92729 1446 aa13.71□□□□□ -0.22
FRMD1-206ENST00000468647 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.22
FRMD1-206ENST00000468647 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.22
FRMD1-206ENST00000468647 CCDC85AQ96PX6 553 aaPredicted RBP13.71□□□□□ -0.22
FRMD1-206ENST00000468647 NRXN1Q9ULB1 1477 aa13.71□□□□□ -0.22
FRMD1-206ENST00000468647 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
FRMD1-206ENST00000468647 SIL1Q9H173 461 aa13.7□□□□□ -0.22
FRMD1-206ENST00000468647 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
FRMD1-206ENST00000468647 BECN1Q14457 450 aa13.7□□□□□ -0.22
FRMD1-206ENST00000468647 PLEKHO1Q53GL0 409 aaPredicted RBP13.7□□□□□ -0.22
FRMD1-206ENST00000468647 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
FRMD1-206ENST00000468647 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
FRMD1-206ENST00000468647 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
FRMD1-206ENST00000468647 ZFYVE9O95405 1425 aa13.69□□□□□ -0.22
FRMD1-206ENST00000468647 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
FRMD1-206ENST00000468647 CPS1P31327 1500 aa13.69□□□□□ -0.22
FRMD1-206ENST00000468647 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 PRAMEF22A3QJZ6 481 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
FRMD1-206ENST00000468647 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
FRMD1-206ENST00000468647 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 FLT4P35916 1363 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
FRMD1-206ENST00000468647 C8orf34Q49A92 452 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 CCDC30Q5VVM6 783 aa13.68□□□□□ -0.22
FRMD1-206ENST00000468647 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
FRMD1-206ENST00000468647 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
FRMD1-206ENST00000468647 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
FRMD1-206ENST00000468647 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
FRMD1-206ENST00000468647 SURF6O75683 361 aaKnown RBP13.67□□□□□ -0.22
FRMD1-206ENST00000468647 FLIIQ13045 1269 aa13.67□□□□□ -0.22
FRMD1-206ENST00000468647 USP6P35125 1406 aa13.67□□□□□ -0.22
FRMD1-206ENST00000468647 PPLO60437 1756 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
FRMD1-206ENST00000468647 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 PI4KAP2A4QPH2 592 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 TATP17735 454 aaPredicted RBP13.66□□□□□ -0.22
FRMD1-206ENST00000468647 PI4KAP1Q8N8J0 262 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
FRMD1-206ENST00000468647 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
FRMD1-206ENST00000468647 CHMP4BQ9H444 224 aaKnown RBP13.65□□□□□ -0.22
FRMD1-206ENST00000468647 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
FRMD1-206ENST00000468647 NUTM1Q86Y26 1132 aa13.65□□□□□ -0.22
FRMD1-206ENST00000468647 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.22
FRMD1-206ENST00000468647 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
FRMD1-206ENST00000468647 TMEM94Q12767 1356 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 HMMRO75330 724 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 DTNBO60941 627 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
FRMD1-206ENST00000468647 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
FRMD1-206ENST00000468647 SETBP1Q9Y6X0 1596 aa13.63□□□□□ -0.23
FRMD1-206ENST00000468647 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
FRMD1-206ENST00000468647 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
FRMD1-206ENST00000468647 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 CABP4P57796 275 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 IP6K1Q92551 441 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 LAMC1P11047 1609 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
FRMD1-206ENST00000468647 CWF19L2Q2TBE0 894 aaKnown RBP13.62□□□□□ -0.23
FRMD1-206ENST00000468647 CHL1O00533 1208 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
FRMD1-206ENST00000468647 KCNJ4P48050 445 aa13.62□□□□□ -0.23
FRMD1-206ENST00000468647 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
FRMD1-206ENST00000468647 IL16Q14005 1332 aa13.61□□□□□ -0.23
FRMD1-206ENST00000468647 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
FRMD1-206ENST00000468647 GNAI2P04899 355 aa13.61□□□□□ -0.23
FRMD1-206ENST00000468647 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
FRMD1-206ENST00000468647 SBNO1A3KN83 1393 aa13.6□□□□□ -0.23
FRMD1-206ENST00000468647 CASC1Q6TDU7 716 aa13.6□□□□□ -0.23
FRMD1-206ENST00000468647 SRCIN1Q9C0H9 1055 aa13.6□□□□□ -0.23
FRMD1-206ENST00000468647 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
FRMD1-206ENST00000468647 MYOM1P52179 1685 aa13.59□□□□□ -0.23
FRMD1-206ENST00000468647 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
FRMD1-206ENST00000468647 ATP7BP35670 1465 aa13.59□□□□□ -0.23
FRMD1-206ENST00000468647 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
FRMD1-206ENST00000468647 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
FRMD1-206ENST00000468647 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
FRMD1-206ENST00000468647 FAM135BQ49AJ0 1406 aa13.59□□□□□ -0.23
FRMD1-206ENST00000468647 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.23
FRMD1-206ENST00000468647 NAP1L2Q9ULW6 460 aaPredicted RBP13.58□□□□□ -0.23
FRMD1-206ENST00000468647 MYO3AQ8NEV4 1616 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 AGLP35573 1532 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
FRMD1-206ENST00000468647 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
FRMD1-206ENST00000468647 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
FRMD1-206ENST00000468647 MSH6P52701 1360 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms