RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
MSH5-214ENST00000468602 MEGF6O75095 1541 aa14.99□□□□□ -0.01
MSH5-214ENST00000468602 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
MSH5-214ENST00000468602 RBM6P78332 1123 aaKnown RBP14.99□□□□□ -0.01
MSH5-214ENST00000468602 AEBP1Q8IUX7 1158 aa14.99□□□□□ -0.01
MSH5-214ENST00000468602 BCL9O00512 1426 aa14.99□□□□□ -0.01
MSH5-214ENST00000468602 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
MSH5-214ENST00000468602 TATP17735 454 aaPredicted RBP14.97□□□□□ -0.01
MSH5-214ENST00000468602 RAPGEF4Q8WZA2 1011 aa14.97□□□□□ -0.01
MSH5-214ENST00000468602 TNS2Q63HR2 1409 aa14.97□□□□□ -0.01
MSH5-214ENST00000468602 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
MSH5-214ENST00000468602 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
MSH5-214ENST00000468602 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
MSH5-214ENST00000468602 HTATSF1O43719 755 aaKnown RBP14.95□□□□□ -0.02
MSH5-214ENST00000468602 HMOX1P09601 288 aa14.95□□□□□ -0.02
MSH5-214ENST00000468602 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
MSH5-214ENST00000468602 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
MSH5-214ENST00000468602 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
MSH5-214ENST00000468602 LRRC37A3O60309 1634 aa14.95□□□□□ -0.02
MSH5-214ENST00000468602 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
MSH5-214ENST00000468602 USHBP1Q8N6Y0 703 aa14.94□□□□□ -0.02
MSH5-214ENST00000468602 PHACTR3Q96KR7 559 aa14.94□□□□□ -0.02
MSH5-214ENST00000468602 SPG7Q9UQ90 795 aa14.94□□□□□ -0.02
MSH5-214ENST00000468602 RXRBP28702 533 aa14.93□□□□□ -0.02
MSH5-214ENST00000468602 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
MSH5-214ENST00000468602 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
MSH5-214ENST00000468602 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
MSH5-214ENST00000468602 EXOC5O00471 708 aa14.92□□□□□ -0.02
MSH5-214ENST00000468602 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
MSH5-214ENST00000468602 NEFMP07197 916 aa14.91□□□□□ -0.02
MSH5-214ENST00000468602 MTHFSDQ2M296 383 aaKnown RBP14.91□□□□□ -0.02
MSH5-214ENST00000468602 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
MSH5-214ENST00000468602 CEMIPQ8WUJ3 1361 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 CYP27B1O15528 508 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 TMPOP42166 694 aaKnown RBP14.9□□□□□ -0.02
MSH5-214ENST00000468602 DDB1Q16531 1140 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
MSH5-214ENST00000468602 IFNL2Q8IZJ0 200 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 FAM9BQ8IZU0 186 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
MSH5-214ENST00000468602 MAPK8IP3Q9UPT6 1336 aa14.9□□□□□ -0.02
MSH5-214ENST00000468602 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
MSH5-214ENST00000468602 PHKG2P15735 406 aa14.89□□□□□ -0.03
MSH5-214ENST00000468602 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
MSH5-214ENST00000468602 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
MSH5-214ENST00000468602 DLG5Q8TDM6 1919 aa14.89□□□□□ -0.03
MSH5-214ENST00000468602 RGS12O14924 1447 aa14.88□□□□□ -0.03
MSH5-214ENST00000468602 MRC1P22897 1456 aa14.88□□□□□ -0.03
MSH5-214ENST00000468602 MAP3K5Q99683 1374 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 GNAT3A8MTJ3 354 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 DCAF5Q96JK2 942 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 SCN11AQ9UI33 1791 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
MSH5-214ENST00000468602 APAF1O14727 1248 aa14.86□□□□□ -0.03
MSH5-214ENST00000468602 ZNF530Q6P9A1 599 aaPredicted RBP14.86□□□□□ -0.03
MSH5-214ENST00000468602 MARCH10Q8NA82 808 aaPredicted RBP14.86□□□□□ -0.03
MSH5-214ENST00000468602 BRWD3Q6RI45 1802 aa14.85□□□□□ -0.03
MSH5-214ENST00000468602 ERVV-2B6SEH9 535 aa14.85□□□□□ -0.03
MSH5-214ENST00000468602 BABAM1Q9NWV8 329 aa14.85□□□□□ -0.03
MSH5-214ENST00000468602 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
MSH5-214ENST00000468602 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
MSH5-214ENST00000468602 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
MSH5-214ENST00000468602 CCDC146Q8IYE0 955 aa14.84□□□□□ -0.03
MSH5-214ENST00000468602 IL16Q14005 1332 aa14.84□□□□□ -0.03
MSH5-214ENST00000468602 VIRMAQ69YN4 1812 aaKnown RBP14.83□□□□□ -0.04
MSH5-214ENST00000468602 RIPK4P57078 832 aa14.83□□□□□ -0.04
MSH5-214ENST00000468602 PDE3BQ13370 1112 aa14.83□□□□□ -0.04
MSH5-214ENST00000468602 WDR63Q8IWG1 891 aa14.83□□□□□ -0.04
MSH5-214ENST00000468602 IL17REQ8NFR9 667 aa14.83□□□□□ -0.04
MSH5-214ENST00000468602 SIPA1L3O60292 1781 aaPredicted RBP14.83□□□□□ -0.04
MSH5-214ENST00000468602 RNMTO43148 476 aaKnown RBP14.82□□□□□ -0.04
MSH5-214ENST00000468602 KRT27Q7Z3Y8 459 aa14.82□□□□□ -0.04
MSH5-214ENST00000468602 WWC1Q8IX03 1113 aa14.82□□□□□ -0.04
MSH5-214ENST00000468602 TOGARAM1Q9Y4F4 1720 aa14.81□□□□□ -0.04
MSH5-214ENST00000468602 SBF2Q86WG5 1849 aa14.81□□□□□ -0.04
MSH5-214ENST00000468602 CALD1Q05682 793 aaKnown RBP14.81□□□□□ -0.04
MSH5-214ENST00000468602 FAM196AQ6ZSG2 479 aa14.81□□□□□ -0.04
MSH5-214ENST00000468602 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
MSH5-214ENST00000468602 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
MSH5-214ENST00000468602 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
MSH5-214ENST00000468602 NHSQ6T4R5 1651 aa14.79□□□□□ -0.04
MSH5-214ENST00000468602 DDX54Q8TDD1 881 aaKnown RBP14.79□□□□□ -0.04
MSH5-214ENST00000468602 ITGB4P16144 1822 aa14.78□□□□□ -0.04
MSH5-214ENST00000468602 SLC52A2Q9HAB3 445 aa14.78□□□□□ -0.04
MSH5-214ENST00000468602 LGR6Q9HBX8 967 aa14.78□□□□□ -0.04
MSH5-214ENST00000468602 MPRIPQ6WCQ1 1025 aa14.77□□□□□ -0.05
MSH5-214ENST00000468602 TRMT2AQ8IZ69 625 aaKnown RBP14.77□□□□□ -0.05
MSH5-214ENST00000468602 CFAP44Q96MT7 982 aa14.77□□□□□ -0.05
MSH5-214ENST00000468602 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
MSH5-214ENST00000468602 DOT1LQ8TEK3 1739 aa14.77□□□□□ -0.05
MSH5-214ENST00000468602 PAPPAQ13219 1627 aa14.77□□□□□ -0.05
MSH5-214ENST00000468602 CHL1O00533 1208 aa14.76□□□□□ -0.05
MSH5-214ENST00000468602 TAF7Q15545 349 aaPredicted RBP14.76□□□□□ -0.05
MSH5-214ENST00000468602 RRP7AQ9Y3A4 280 aaKnown RBP14.76□□□□□ -0.05
MSH5-214ENST00000468602 ZNF831Q5JPB2 1677 aa14.76□□□□□ -0.05
MSH5-214ENST00000468602 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
MSH5-214ENST00000468602 MCM10Q7L590 875 aa14.75□□□□□ -0.05
MSH5-214ENST00000468602 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
MSH5-214ENST00000468602 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms