RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
NPM3-203ENST00000468544 RGS12O14924 1447 aa13.59□□□□□ -0.23
NPM3-203ENST00000468544 PRKAR2BP31323 418 aa13.59□□□□□ -0.23
NPM3-203ENST00000468544 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPM3-203ENST00000468544 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
NPM3-203ENST00000468544 EXOC5O00471 708 aa13.58□□□□□ -0.24
NPM3-203ENST00000468544 DDB1Q16531 1140 aa13.58□□□□□ -0.24
NPM3-203ENST00000468544 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
NPM3-203ENST00000468544 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
NPM3-203ENST00000468544 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
NPM3-203ENST00000468544 CCDC146Q8IYE0 955 aa13.57□□□□□ -0.24
NPM3-203ENST00000468544 MARCH10Q8NA82 808 aaPredicted RBP13.57□□□□□ -0.24
NPM3-203ENST00000468544 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
NPM3-203ENST00000468544 CYP27B1O15528 508 aa13.56□□□□□ -0.24
NPM3-203ENST00000468544 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
NPM3-203ENST00000468544 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
NPM3-203ENST00000468544 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
NPM3-203ENST00000468544 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
NPM3-203ENST00000468544 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
NPM3-203ENST00000468544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPM3-203ENST00000468544 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
NPM3-203ENST00000468544 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
NPM3-203ENST00000468544 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
NPM3-203ENST00000468544 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
NPM3-203ENST00000468544 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
NPM3-203ENST00000468544 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
NPM3-203ENST00000468544 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 PHKG2P15735 406 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
NPM3-203ENST00000468544 RUNDC1Q96C34 613 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 EP400Q96L91 3159 aa13.53□□□□□ -0.24
NPM3-203ENST00000468544 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
NPM3-203ENST00000468544 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
NPM3-203ENST00000468544 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
NPM3-203ENST00000468544 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
NPM3-203ENST00000468544 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
NPM3-203ENST00000468544 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
NPM3-203ENST00000468544 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 SOCS7O14512 581 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 APAF1O14727 1248 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
NPM3-203ENST00000468544 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
NPM3-203ENST00000468544 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
NPM3-203ENST00000468544 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
NPM3-203ENST00000468544 MAPK8IP3Q9UPT6 1336 aa13.49□□□□□ -0.25
NPM3-203ENST00000468544 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
NPM3-203ENST00000468544 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
NPM3-203ENST00000468544 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
NPM3-203ENST00000468544 KCNQ2O43526 872 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
NPM3-203ENST00000468544 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
NPM3-203ENST00000468544 NEFMP07197 916 aa13.47□□□□□ -0.25
NPM3-203ENST00000468544 RIPK4P57078 832 aa13.47□□□□□ -0.25
NPM3-203ENST00000468544 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
NPM3-203ENST00000468544 BCL9O00512 1426 aa13.47□□□□□ -0.25
NPM3-203ENST00000468544 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
NPM3-203ENST00000468544 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
NPM3-203ENST00000468544 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
NPM3-203ENST00000468544 MCM10Q7L590 875 aa13.46□□□□□ -0.25
NPM3-203ENST00000468544 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
NPM3-203ENST00000468544 TRIM35Q9UPQ4 493 aa13.46□□□□□ -0.25
NPM3-203ENST00000468544 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
NPM3-203ENST00000468544 TRIM37O94972 964 aa13.45□□□□□ -0.26
NPM3-203ENST00000468544 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
NPM3-203ENST00000468544 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
NPM3-203ENST00000468544 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
NPM3-203ENST00000468544 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
NPM3-203ENST00000468544 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
NPM3-203ENST00000468544 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
NPM3-203ENST00000468544 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
NPM3-203ENST00000468544 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
NPM3-203ENST00000468544 PIGBQ92521 554 aa13.42□□□□□ -0.26
NPM3-203ENST00000468544 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
NPM3-203ENST00000468544 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
NPM3-203ENST00000468544 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
NPM3-203ENST00000468544 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
NPM3-203ENST00000468544 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
NPM3-203ENST00000468544 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
NPM3-203ENST00000468544 CABP4P57796 275 aa13.4□□□□□ -0.26
NPM3-203ENST00000468544 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
NPM3-203ENST00000468544 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
NPM3-203ENST00000468544 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
NPM3-203ENST00000468544 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
NPM3-203ENST00000468544 TEFQ10587 303 aa13.38□□□□□ -0.27
NPM3-203ENST00000468544 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
NPM3-203ENST00000468544 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
NPM3-203ENST00000468544 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms