RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 SEPT12Q8IYM1 358 aa5.45□□□□□ -1.54
CDHR3-206ENST00000468477 HMX1Q9NP08 348 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-206ENST00000468477 AMOTL2Q9Y2J4 779 aa5.45□□□□□ -1.54
CDHR3-206ENST00000468477 TTLL8A6PVC2 850 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 PATL2C9JE40 543 aaKnown RBP5.44□□□□□ -1.54
CDHR3-206ENST00000468477 WIPF1O43516 503 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 TAF7LQ5H9L4 462 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 INTS6LQ5JSJ4 861 aaKnown RBP5.44□□□□□ -1.54
CDHR3-206ENST00000468477 RNF20Q5VTR2 975 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 FBXO31Q5XUX0 539 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-206ENST00000468477 EPS8L1Q8TE68 723 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 CWC22Q9HCG8 908 aaKnown RBP5.44□□□□□ -1.54
CDHR3-206ENST00000468477 PCDHB9Q9Y5E1 797 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 NDUFB9Q9Y6M9 179 aa5.44□□□□□ -1.54
CDHR3-206ENST00000468477 SOCS7O14512 581 aa5.43□□□□□ -1.54
CDHR3-206ENST00000468477 Q6ZVU0 165 aa5.43□□□□□ -1.54
CDHR3-206ENST00000468477 ARID4BQ4LE39 1312 aaPredicted RBP5.43□□□□□ -1.54
CDHR3-206ENST00000468477 H3BM21 787 aa5.42□□□□□ -1.54
CDHR3-206ENST00000468477 PDE4CQ08493 712 aa5.42□□□□□ -1.54
CDHR3-206ENST00000468477 POLMQ9NP87 494 aaPredicted RBP5.42□□□□□ -1.54
CDHR3-206ENST00000468477 STK17AQ9UEE5 414 aa5.42□□□□□ -1.54
CDHR3-206ENST00000468477 SOS2Q07890 1332 aaPredicted RBP5.42□□□□□ -1.54
CDHR3-206ENST00000468477 ACIN1Q9UKV3 1341 aaKnown RBP5.42□□□□□ -1.54
CDHR3-206ENST00000468477 VEGFBP49765 207 aa5.41□□□□□ -1.54
CDHR3-206ENST00000468477 RELBQ01201 579 aa5.41□□□□□ -1.54
CDHR3-206ENST00000468477 CBLBQ13191 982 aa5.41□□□□□ -1.54
CDHR3-206ENST00000468477 TRIM34Q9BYJ4 488 aa5.41□□□□□ -1.54
CDHR3-206ENST00000468477 SOBPA7XYQ1 873 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 ERVH48-1M5A8F1 160 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 SPINT1O43278 529 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 NR1H3Q13133 447 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 MCM6Q14566 821 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 CCDC27Q2M243 656 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.54
CDHR3-206ENST00000468477 OCSTAMPQ9BR26 566 aa5.4□□□□□ -1.54
CDHR3-206ENST00000468477 ADH1AP07327 375 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 FBXO45P0C2W1 286 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 KCNA1Q09470 495 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 CERS3Q8IU89 383 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 ZNF784Q8NCA9 323 aaPredicted RBP5.39□□□□□ -1.55
CDHR3-206ENST00000468477 POM121Q96HA1 1249 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 TMPRSS4Q9NRS4 437 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 DNMT3LQ9UJW3 386 aa5.39□□□□□ -1.55
CDHR3-206ENST00000468477 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
CDHR3-206ENST00000468477 FIGNL2A6NMB9 653 aa5.38□□□□□ -1.55
CDHR3-206ENST00000468477 ESPNB1AK53 854 aa5.38□□□□□ -1.55
CDHR3-206ENST00000468477 PPP1R15AO75807 674 aaPredicted RBP5.38□□□□□ -1.55
CDHR3-206ENST00000468477 CANXP27824 592 aaKnown RBP5.38□□□□□ -1.55
CDHR3-206ENST00000468477 GMPRP36959 345 aa5.38□□□□□ -1.55
CDHR3-206ENST00000468477 GJD4Q96KN9 370 aaPredicted RBP5.38□□□□□ -1.55
CDHR3-206ENST00000468477 ZNF395Q9H8N7 513 aaPredicted RBP5.38□□□□□ -1.55
CDHR3-206ENST00000468477 ATP5J2-PTCD1G3V325 749 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 PPFIA3O75145 1194 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 PTGIRP43119 386 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 EIF4G2P78344 907 aaKnown RBP eCLIP5.37□□□□□ -1.55
CDHR3-206ENST00000468477 PTSQ03393 145 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 AGBL1Q96MI9 1066 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 INSM2Q96T92 566 aaPredicted RBP5.37□□□□□ -1.55
CDHR3-206ENST00000468477 PSMD1Q99460 953 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 CYLDQ9NQC7 956 aa5.37□□□□□ -1.55
CDHR3-206ENST00000468477 GIGYF1O75420 1035 aaPredicted RBP5.36□□□□□ -1.55
CDHR3-206ENST00000468477 BRD1O95696 1058 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 MYCP01106 439 aaPredicted RBP5.36□□□□□ -1.55
CDHR3-206ENST00000468477 CC2D2BQ6DHV5 1058 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 LYSMD3Q7Z3D4 306 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 CYP2U1Q7Z449 544 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 WWC1Q8IX03 1113 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 MTMR14Q8NCE2 650 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 NLRP3Q96P20 1036 aa5.36□□□□□ -1.55
CDHR3-206ENST00000468477 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
CDHR3-206ENST00000468477 GTF2E1P29083 439 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-206ENST00000468477 CTSOP43234 321 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-206ENST00000468477 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
CDHR3-206ENST00000468477 ERBB4Q15303 1308 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 MEN1O00255 615 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 SMARCA5O60264 1052 aaPredicted RBP5.34□□□□□ -1.55
CDHR3-206ENST00000468477 SLC27A3Q5K4L6 730 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 CCDC155Q8N6L0 562 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 RNF217Q8TC41 542 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 SNRKQ9NRH2 765 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 IGSF5Q9NSI5 407 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 BCCIPQ9P287 314 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDHR3-206ENST00000468477 PCDHB11Q9Y5F2 797 aa5.34□□□□□ -1.55
CDHR3-206ENST00000468477 CDC14CA4D256 554 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 LILRA1O75019 489 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 CLSTN1O94985 981 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 GPC1P35052 558 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 ADD1P35611 737 aaKnown RBP5.33□□□□□ -1.56
CDHR3-206ENST00000468477 ERVK-9P63128 1117 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 WASHC4Q2M389 1173 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 SLFNL1Q499Z3 407 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 FOXR1Q6PIV2 292 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 SV2AQ7L0J3 742 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 TICAM2Q86XR7 235 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 SIRT1Q96EB6 747 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 BRPF3Q9ULD4 1205 aa5.33□□□□□ -1.56
CDHR3-206ENST00000468477 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.33□□□□□ -1.56
CDHR3-206ENST00000468477 ITGA6P23229 1130 aa5.32□□□□□ -1.56
CDHR3-206ENST00000468477 RNF144AP50876 292 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms