RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
MSH5-213ENST00000468136 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
MSH5-213ENST00000468136 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.33
MSH5-213ENST00000468136 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
MSH5-213ENST00000468136 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
MSH5-213ENST00000468136 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
MSH5-213ENST00000468136 API5Q9BZZ5 524 aaKnown RBP13.01□□□□□ -0.33
MSH5-213ENST00000468136 CRB1P82279 1406 aa13.01□□□□□ -0.33
MSH5-213ENST00000468136 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
MSH5-213ENST00000468136 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
MSH5-213ENST00000468136 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
MSH5-213ENST00000468136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.332e-6■□□□□ 9.5
MSH5-213ENST00000468136 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
MSH5-213ENST00000468136 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
MSH5-213ENST00000468136 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
MSH5-213ENST00000468136 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
MSH5-213ENST00000468136 ERBB3P21860 1342 aa12.98□□□□□ -0.33
MSH5-213ENST00000468136 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
MSH5-213ENST00000468136 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
MSH5-213ENST00000468136 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
MSH5-213ENST00000468136 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
MSH5-213ENST00000468136 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
MSH5-213ENST00000468136 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
MSH5-213ENST00000468136 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
MSH5-213ENST00000468136 PTPRCP08575 1304 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 FAM208AQ9UK61 1670 aaKnown RBP12.97□□□□□ -0.33
MSH5-213ENST00000468136 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 HOXB7P09629 217 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 TRIM27P14373 513 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
MSH5-213ENST00000468136 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
MSH5-213ENST00000468136 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
MSH5-213ENST00000468136 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
MSH5-213ENST00000468136 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
MSH5-213ENST00000468136 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
MSH5-213ENST00000468136 MCM10Q7L590 875 aa12.96□□□□□ -0.33
MSH5-213ENST00000468136 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
MSH5-213ENST00000468136 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
MSH5-213ENST00000468136 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
MSH5-213ENST00000468136 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
MSH5-213ENST00000468136 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
MSH5-213ENST00000468136 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
MSH5-213ENST00000468136 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
MSH5-213ENST00000468136 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
MSH5-213ENST00000468136 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
MSH5-213ENST00000468136 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
MSH5-213ENST00000468136 CCDC30Q5VVM6 783 aa12.93□□□□□ -0.34
MSH5-213ENST00000468136 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
MSH5-213ENST00000468136 ABCC4O15439 1325 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 RLBP1P12271 317 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 TEFQ10587 303 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
MSH5-213ENST00000468136 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 COL18A1P39060 1754 aa12.92□□□□□ -0.34
MSH5-213ENST00000468136 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
MSH5-213ENST00000468136 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
MSH5-213ENST00000468136 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
MSH5-213ENST00000468136 CSB-PGBD3P0DP91 1061 aa12.9□□□□□ -0.34
MSH5-213ENST00000468136 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
MSH5-213ENST00000468136 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
MSH5-213ENST00000468136 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
MSH5-213ENST00000468136 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
MSH5-213ENST00000468136 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
MSH5-213ENST00000468136 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
MSH5-213ENST00000468136 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
MSH5-213ENST00000468136 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
MSH5-213ENST00000468136 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
MSH5-213ENST00000468136 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
MSH5-213ENST00000468136 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
MSH5-213ENST00000468136 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
MSH5-213ENST00000468136 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
MSH5-213ENST00000468136 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
MSH5-213ENST00000468136 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
MSH5-213ENST00000468136 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
MSH5-213ENST00000468136 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
MSH5-213ENST00000468136 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
MSH5-213ENST00000468136 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
MSH5-213ENST00000468136 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
MSH5-213ENST00000468136 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
MSH5-213ENST00000468136 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
MSH5-213ENST00000468136 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
MSH5-213ENST00000468136 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
MSH5-213ENST00000468136 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
MSH5-213ENST00000468136 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
MSH5-213ENST00000468136 IGHDP01880 384 aa12.84□□□□□ -0.35
MSH5-213ENST00000468136 PHKG2P15735 406 aa12.84□□□□□ -0.35
MSH5-213ENST00000468136 CABLES1Q8TDN4 633 aa12.84□□□□□ -0.35
MSH5-213ENST00000468136 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
MSH5-213ENST00000468136 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
MSH5-213ENST00000468136 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms