RNA–Protein interactions for RNA: ENST00000467913.1

PLXNB1-210, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 688 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-210ENST00000467913 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
PLXNB1-210ENST00000467913 RRS1Q15050 365 aaKnown RBP24.71■■□□□ 1.55
PLXNB1-210ENST00000467913 SLC27A3Q5K4L6 730 aa24.71■■□□□ 1.55
PLXNB1-210ENST00000467913 KLHL34Q8N239 644 aa24.71■■□□□ 1.55
PLXNB1-210ENST00000467913 QSER1Q2KHR3 1735 aa24.71■■□□□ 1.55
PLXNB1-210ENST00000467913 USHBP1Q8N6Y0 703 aa24.7■■□□□ 1.54
PLXNB1-210ENST00000467913 ZCRB1Q8TBF4 217 aaKnown RBP24.69■■□□□ 1.54
PLXNB1-210ENST00000467913 LY75O60449 1722 aa24.69■■□□□ 1.54
PLXNB1-210ENST00000467913 GGNBP2Q9H3C7 697 aa24.68■■□□□ 1.54
PLXNB1-210ENST00000467913 CHD4Q14839 1912 aa24.67■■□□□ 1.54
PLXNB1-210ENST00000467913 NBPF6Q5VWK0 638 aa24.67■■□□□ 1.54
PLXNB1-210ENST00000467913 NBPF4Q96M43 638 aa24.67■■□□□ 1.54
PLXNB1-210ENST00000467913 TFCP2L1Q9NZI6 479 aa24.67■■□□□ 1.54
PLXNB1-210ENST00000467913 RTL1A6NKG5 1358 aa24.67■■□□□ 1.54
PLXNB1-210ENST00000467913 COL24A1Q17RW2 1714 aa24.66■■□□□ 1.54
PLXNB1-210ENST00000467913 FYB1O15117 783 aa24.64■■□□□ 1.54
PLXNB1-210ENST00000467913 SLC16A10Q8TF71 515 aa24.64■■□□□ 1.54
PLXNB1-210ENST00000467913 POLD1P28340 1107 aa24.63■■□□□ 1.53
PLXNB1-210ENST00000467913 GPR162Q16538 588 aa24.63■■□□□ 1.53
PLXNB1-210ENST00000467913 CCNL1Q9UK58 526 aaPredicted RBP24.63■■□□□ 1.53
PLXNB1-210ENST00000467913 USP47Q96K76 1375 aa24.62■■□□□ 1.53
PLXNB1-210ENST00000467913 GOLGB1Q14789 3259 aaKnown RBP24.62■■□□□ 1.53
PLXNB1-210ENST00000467913 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
PLXNB1-210ENST00000467913 NLGN2Q8NFZ4 835 aa24.61■■□□□ 1.53
PLXNB1-210ENST00000467913 KIF20BQ96Q89 1820 aa24.59■■□□□ 1.53
PLXNB1-210ENST00000467913 HSP90AB2PQ58FF8 381 aa24.59■■□□□ 1.53
PLXNB1-210ENST00000467913 SMG6Q86US8 1419 aaKnown RBP24.59■■□□□ 1.53
PLXNB1-210ENST00000467913 TMF1P82094 1093 aa24.58■■□□□ 1.53
PLXNB1-210ENST00000467913 RAPGEF4Q8WZA2 1011 aa24.58■■□□□ 1.53
PLXNB1-210ENST00000467913 MSH5O43196 834 aa24.57■■□□□ 1.52
PLXNB1-210ENST00000467913 COL23A1Q86Y22 540 aaPredicted RBP24.57■■□□□ 1.52
PLXNB1-210ENST00000467913 MSL1Q68DK7 614 aa24.56■■□□□ 1.52
PLXNB1-210ENST00000467913 SLC24A1O60721 1099 aa24.55■■□□□ 1.52
PLXNB1-210ENST00000467913 TATP17735 454 aaPredicted RBP24.55■■□□□ 1.52
PLXNB1-210ENST00000467913 INSRP06213 1382 aa24.54■■□□□ 1.52
PLXNB1-210ENST00000467913 C5P01031 1676 aa24.54■■□□□ 1.52
PLXNB1-210ENST00000467913 CGNL1Q0VF96 1302 aa24.54■■□□□ 1.52
PLXNB1-210ENST00000467913 FLT4P35916 1363 aa24.54■■□□□ 1.52
PLXNB1-210ENST00000467913 TOGARAM1Q9Y4F4 1720 aa24.53■■□□□ 1.52
PLXNB1-210ENST00000467913 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
PLXNB1-210ENST00000467913 PCDH11XQ9BZA7 1347 aa24.52■■□□□ 1.52
PLXNB1-210ENST00000467913 PCDH11YQ9BZA8 1340 aa24.52■■□□□ 1.52
PLXNB1-210ENST00000467913 CARD14Q9BXL6 1004 aa24.51■■□□□ 1.51
PLXNB1-210ENST00000467913 PALLDQ8WX93 1383 aa24.51■■□□□ 1.51
PLXNB1-210ENST00000467913 CYP27B1O15528 508 aa24.5■■□□□ 1.51
PLXNB1-210ENST00000467913 YBX3P16989 372 aaKnown RBP eCLIP24.5■■□□□ 1.51
PLXNB1-210ENST00000467913 MPRIPQ6WCQ1 1025 aa24.5■■□□□ 1.51
PLXNB1-210ENST00000467913 SENP3-EIF4A1A0A087X0R7 540 aa24.49■■□□□ 1.51
PLXNB1-210ENST00000467913 C1QTNF8P60827 252 aa24.49■■□□□ 1.51
PLXNB1-210ENST00000467913 NSD3Q9BZ95 1437 aa24.49■■□□□ 1.51
PLXNB1-210ENST00000467913 TAF1LQ8IZX4 1826 aa24.49■■□□□ 1.51
PLXNB1-210ENST00000467913 ITGB4P16144 1822 aa24.47■■□□□ 1.51
PLXNB1-210ENST00000467913 PKD1L3Q7Z443 1732 aa24.47■■□□□ 1.51
PLXNB1-210ENST00000467913 KIF24Q5T7B8 1368 aa24.46■■□□□ 1.51
PLXNB1-210ENST00000467913 AMIGO3Q86WK7 504 aa24.46■■□□□ 1.51
PLXNB1-210ENST00000467913 PPM1GO15355 546 aaPredicted RBP24.45■■□□□ 1.5
PLXNB1-210ENST00000467913 SMIM5Q71RC9 77 aa24.45■■□□□ 1.5
PLXNB1-210ENST00000467913 C4BP0C0L5 1744 aa24.44■■□□□ 1.5
PLXNB1-210ENST00000467913 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
PLXNB1-210ENST00000467913 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
PLXNB1-210ENST00000467913 ANKRD26Q9UPS8 1709 aa24.42■■□□□ 1.5
PLXNB1-210ENST00000467913 GIGYF1O75420 1035 aaPredicted RBP24.41■■□□□ 1.5
PLXNB1-210ENST00000467913 PIGBQ92521 554 aa24.41■■□□□ 1.5
PLXNB1-210ENST00000467913 PHF14O94880 888 aa24.4■■□□□ 1.5
PLXNB1-210ENST00000467913 AK7Q96M32 723 aa24.39■■□□□ 1.49
PLXNB1-210ENST00000467913 UBR3Q6ZT12 1888 aa24.38■■□□□ 1.49
PLXNB1-210ENST00000467913 GRIN3BO60391 1043 aa24.38■■□□□ 1.49
PLXNB1-210ENST00000467913 FLAD1Q8NFF5 587 aa24.37■■□□□ 1.49
PLXNB1-210ENST00000467913 SMARCC1Q92922 1105 aaPredicted RBP24.37■■□□□ 1.49
PLXNB1-210ENST00000467913 EYA1Q99502 592 aa24.37■■□□□ 1.49
PLXNB1-210ENST00000467913 MAP2P11137 1827 aaKnown RBP24.37■■□□□ 1.49
PLXNB1-210ENST00000467913 LINC00116Q8NCU8 138 aa24.36■■□□□ 1.49
PLXNB1-210ENST00000467913 WWC3Q9ULE0 1092 aa24.36■■□□□ 1.49
PLXNB1-210ENST00000467913 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
PLXNB1-210ENST00000467913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.35■■□□□ 1.49
PLXNB1-210ENST00000467913 NKX1-1Q15270 411 aaPredicted RBP24.35■■□□□ 1.49
PLXNB1-210ENST00000467913 CD2APQ9Y5K6 639 aa24.35■■□□□ 1.49
PLXNB1-210ENST00000467913 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
PLXNB1-210ENST00000467913 SPG7Q9UQ90 795 aa24.34■■□□□ 1.49
PLXNB1-210ENST00000467913 ATP10DQ9P241 1426 aa24.34■■□□□ 1.49
PLXNB1-210ENST00000467913 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.49
PLXNB1-210ENST00000467913 SIK1P57059 783 aa24.33■■□□□ 1.49
PLXNB1-210ENST00000467913 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
PLXNB1-210ENST00000467913 POLR3GLQ9BT43 218 aa24.32■■□□□ 1.48
PLXNB1-210ENST00000467913 ASAP1Q9ULH1 1129 aa24.32■■□□□ 1.48
PLXNB1-210ENST00000467913 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
PLXNB1-210ENST00000467913 ITPK1Q13572 414 aa24.31■■□□□ 1.48
PLXNB1-210ENST00000467913 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
PLXNB1-210ENST00000467913 PHKG2P15735 406 aa24.3■■□□□ 1.48
PLXNB1-210ENST00000467913 IGSF1Q8N6C5 1336 aa24.29■■□□□ 1.48
PLXNB1-210ENST00000467913 GNPATO15228 680 aa24.28■■□□□ 1.48
PLXNB1-210ENST00000467913 HMGB2P26583 209 aaKnown RBP24.28■■□□□ 1.48
PLXNB1-210ENST00000467913 EIF4A2Q14240 407 aaKnown RBP24.28■■□□□ 1.48
PLXNB1-210ENST00000467913 SSFA2P28290 1259 aa24.27■■□□□ 1.48
PLXNB1-210ENST00000467913 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
PLXNB1-210ENST00000467913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.27■■□□□ 1.481e-8■□□□□ 9.1
PLXNB1-210ENST00000467913 ATP6V1AP38606 617 aa24.26■■□□□ 1.47
PLXNB1-210ENST00000467913 ATG3Q9NT62 314 aa24.26■■□□□ 1.47
PLXNB1-210ENST00000467913 CEP350Q5VT06 3117 aa24.26■■□□□ 1.47
PLXNB1-210ENST00000467913 ZNF526Q8TF50 670 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms