RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
LCA5-203ENST00000467898 GGT6Q6P531 493 aa11.24□□□□□ -0.61
LCA5-203ENST00000467898 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.24□□□□□ -0.61
LCA5-203ENST00000467898 PIK3C2GO75747 1445 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 KRT222Q8N1A0 295 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 INSRP06213 1382 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 REC8O95072 547 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 CASQ1P31415 396 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 TMF1P82094 1093 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 MLECQ14165 292 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 KLHL40Q2TBA0 621 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 RPAINQ86UA6 219 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 PIBF1Q8WXW3 757 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 SGSM3Q96HU1 749 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
LCA5-203ENST00000467898 ADGRB1O14514 1584 aa11.23□□□□□ -0.61
LCA5-203ENST00000467898 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 GOLGA6L1Q8N7Z2 621 aa11.22□□□□□ -0.61
LCA5-203ENST00000467898 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
LCA5-203ENST00000467898 KDM5AP29375 1690 aaKnown RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
LCA5-203ENST00000467898 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 DDIT3P35638 169 aa11.22□□□□□ -0.61
LCA5-203ENST00000467898 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
LCA5-203ENST00000467898 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.61
LCA5-203ENST00000467898 ITFG2Q969R8 447 aa11.21□□□□□ -0.61
LCA5-203ENST00000467898 MYO5BQ9ULV0 1848 aa11.21□□□□□ -0.61
LCA5-203ENST00000467898 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 CYP2C19P33261 490 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 GSCP56915 257 aaPredicted RBP11.21□□□□□ -0.62
LCA5-203ENST00000467898 CHAF1AQ13111 956 aaPredicted RBP11.21□□□□□ -0.62
LCA5-203ENST00000467898 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.62
LCA5-203ENST00000467898 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 CFAP44Q96MT7 982 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 FAM210AQ96ND0 272 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 ERVK-7P63135 1459 aa11.21□□□□□ -0.62
LCA5-203ENST00000467898 FAM69CQ0P6D2 419 aa11.2□□□□□ -0.62
LCA5-203ENST00000467898 SPTLC3Q9NUV7 552 aa11.2□□□□□ -0.62
LCA5-203ENST00000467898 SKAP1Q86WV1 359 aa11.2□□□□□ -0.62
LCA5-203ENST00000467898 CXorf56Q9H5V9 222 aa11.2□□□□□ -0.62
LCA5-203ENST00000467898 AGLP35573 1532 aa11.19□□□□□ -0.62
LCA5-203ENST00000467898 CCDC189A1A4V9 331 aa11.19□□□□□ -0.62
LCA5-203ENST00000467898 TMEM131LA2VDJ0 1609 aa11.19□□□□□ -0.62
LCA5-203ENST00000467898 EIF3AQ14152 1382 aaKnown RBP11.19□□□□□ -0.62
LCA5-203ENST00000467898 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
LCA5-203ENST00000467898 LIG1P18858 919 aa11.19□□□□□ -0.62
LCA5-203ENST00000467898 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 FAM53CQ9NYF3 392 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 SUFUQ9UMX1 484 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 MRVI1Q9Y6F6 885 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 C11orf91Q3C1V1 193 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 STK26Q9P289 416 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 HNRNPH2P55795 449 aaKnown RBP11.18□□□□□ -0.62
LCA5-203ENST00000467898 RAB3GAP1Q15042 981 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
LCA5-203ENST00000467898 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
LCA5-203ENST00000467898 JRKLQ9Y4A0 524 aa11.17□□□□□ -0.62
LCA5-203ENST00000467898 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
LCA5-203ENST00000467898 ARHGEF28Q8N1W1 1705 aaKnown RBP11.17□□□□□ -0.62
LCA5-203ENST00000467898 NOLC1Q14978 699 aaKnown RBP eCLIP11.17□□□□□ -0.62
LCA5-203ENST00000467898 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
LCA5-203ENST00000467898 C14orf93Q9H972 538 aaKnown RBP11.16□□□□□ -0.62
LCA5-203ENST00000467898 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
LCA5-203ENST00000467898 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
LCA5-203ENST00000467898 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
LCA5-203ENST00000467898 KIF18AQ8NI77 898 aa11.15□□□□□ -0.62
LCA5-203ENST00000467898 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.62
LCA5-203ENST00000467898 ARHGEF40Q8TER5 1519 aa11.15□□□□□ -0.62
LCA5-203ENST00000467898 A0A1B0GUL7 405 aa11.15□□□□□ -0.62
LCA5-203ENST00000467898 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.62
LCA5-203ENST00000467898 ZFYVE9O95405 1425 aa11.15□□□□□ -0.63
LCA5-203ENST00000467898 ASXL1Q8IXJ9 1541 aa11.15□□□□□ -0.63
LCA5-203ENST00000467898 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
LCA5-203ENST00000467898 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
LCA5-203ENST00000467898 SUGP1Q8IWZ8 645 aaKnown RBP11.14□□□□□ -0.63
LCA5-203ENST00000467898 SMC5Q8IY18 1101 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 TSC1Q92574 1164 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 CWC15Q9P013 229 aaKnown RBP11.14□□□□□ -0.63
LCA5-203ENST00000467898 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 MPNDQ8N594 471 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 TACO1Q9BSH4 297 aaKnown RBP11.14□□□□□ -0.63
LCA5-203ENST00000467898 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 KCNA4P22459 653 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 TBC1D22AQ8WUA7 517 aa11.14□□□□□ -0.63
LCA5-203ENST00000467898 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
LCA5-203ENST00000467898 MTA1Q13330 715 aa11.13□□□□□ -0.63
LCA5-203ENST00000467898 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
LCA5-203ENST00000467898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
LCA5-203ENST00000467898 IDI1Q13907 227 aa11.13□□□□□ -0.63
LCA5-203ENST00000467898 PAIP2Q9BPZ3 127 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms